Click here to switch to the map view.

The map label for this gene is atpF

Identifier: 45657122

GI number: 45657122

Start: 1530691

End: 1531212

Strand: Direct

Name: atpF

Synonym: LIC11239

Alternate gene names: 45657122

Gene position: 1530691-1531212 (Clockwise)

Preceding gene: 45657121

Following gene: 45657123

Centisome position: 35.79

GC content: 42.72

Gene sequence:

>522_bases
TTGGTACTCTTAGCTGCTAAGGGATTAAGTCTTCTGGATGTGAACCCGGGTCTGGTAGTCTGGACTCTGGTTACCTTTCT
AGTCGTAGTCTTAGTTCTTAAAAAGTTTGCCTGGGATGTGATTCTGAAAGCCCTAGATGAAAGAGCAGAAACCGTTCAGA
ACGACATTAAAAAGGCTTCAGAACTCCGTTTAGAAGCGGAAGCTCTCTTAAAGGATTACGAAGCTAGGTTAAACTCTGCA
AAGGACGAGGCAAATGCAATTGTTGCGGAAGCCAAGTCTGACGCACTAAAACTGAAGAATAAACTTCTCGAAGAAACTAA
CGGGGAAGTAAAGGCTCAGAAAGATCAGGCAGTGAAAGAGATAGAACTCGCTAAGGCGAAGGCGTTGGGACAACTACAGG
CTCAAATCGTAGAAATGACGATCACTGTTGCTGCCAAGGTTCTGGAAAAACAACTTAAAAGCGAAGACTACAAAGCTTTT
ATTGAAACAGAATTAGATAAACTGGGAAAACTGAGCGCATAA

Upstream 100 bases:

>100_bases
TTTCCAAGCTGCGGGAACTCTGAACGAAGGATTAAAAGCTACCGTTGCTCACCAGACGAAAGCTTCTGCAGTCGTAACTG
AAGAAAAAGGGAAGTAAACC

Downstream 100 bases:

>100_bases
ACCAATGAACGATTCCGGCGTTTCCAAAACATACGCTTCCGCACTTTTAGGAGCAACAAACGTTCCCGAAGAAGTGGAAC
AAGAGTTAGGTGATTTAGCT

Product: F0F1 ATP synthase subunit B

Products: ADP; phosphate; H+

Alternate protein names: ATP synthase F(0) sector subunit b; ATPase subunit I; F-type ATPase subunit b; F-ATPase subunit b [H]

Number of amino acids: Translated: 173; Mature: 173

Protein sequence:

>173_residues
MVLLAAKGLSLLDVNPGLVVWTLVTFLVVVLVLKKFAWDVILKALDERAETVQNDIKKASELRLEAEALLKDYEARLNSA
KDEANAIVAEAKSDALKLKNKLLEETNGEVKAQKDQAVKEIELAKAKALGQLQAQIVEMTITVAAKVLEKQLKSEDYKAF
IETELDKLGKLSA

Sequences:

>Translated_173_residues
MVLLAAKGLSLLDVNPGLVVWTLVTFLVVVLVLKKFAWDVILKALDERAETVQNDIKKASELRLEAEALLKDYEARLNSA
KDEANAIVAEAKSDALKLKNKLLEETNGEVKAQKDQAVKEIELAKAKALGQLQAQIVEMTITVAAKVLEKQLKSEDYKAF
IETELDKLGKLSA
>Mature_173_residues
MVLLAAKGLSLLDVNPGLVVWTLVTFLVVVLVLKKFAWDVILKALDERAETVQNDIKKASELRLEAEALLKDYEARLNSA
KDEANAIVAEAKSDALKLKNKLLEETNGEVKAQKDQAVKEIELAKAKALGQLQAQIVEMTITVAAKVLEKQLKSEDYKAF
IETELDKLGKLSA

Specific function: Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0) [H]

COG id: COG0711

COG function: function code C; F0F1-type ATP synthase, subunit b

Gene ontology:

Cell location: Cell inner membrane; Single-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ATPase B chain family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002146
- InterPro:   IPR005864 [H]

Pfam domain/function: PF00430 ATP-synt_B [H]

EC number: 3.6.3.14

Molecular weight: Translated: 19042; Mature: 19042

Theoretical pI: Translated: 5.16; Mature: 5.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVLLAAKGLSLLDVNPGLVVWTLVTFLVVVLVLKKFAWDVILKALDERAETVQNDIKKAS
CEEEECCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ELRLEAEALLKDYEARLNSAKDEANAIVAEAKSDALKLKNKLLEETNGEVKAQKDQAVKE
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH
IELAKAKALGQLQAQIVEMTITVAAKVLEKQLKSEDYKAFIETELDKLGKLSA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MVLLAAKGLSLLDVNPGLVVWTLVTFLVVVLVLKKFAWDVILKALDERAETVQNDIKKAS
CEEEECCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ELRLEAEALLKDYEARLNSAKDEANAIVAEAKSDALKLKNKLLEETNGEVKAQKDQAVKE
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH
IELAKAKALGQLQAQIVEMTITVAAKVLEKQLKSEDYKAFIETELDKLGKLSA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; H2O; H+

Specific reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out)

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA