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The map label for this gene is 45656915

Identifier: 45656915

GI number: 45656915

Start: 1271385

End: 1271780

Strand: Direct

Name: 45656915

Synonym: LIC11031

Alternate gene names: NA

Gene position: 1271385-1271780 (Clockwise)

Preceding gene: 45656912

Following gene: 45656916

Centisome position: 29.72

GC content: 42.93

Gene sequence:

>396_bases
GTGGCGACTCAACAAAGTCGACCGCGTAGGAAACTCAACATCTCGCTCTTTACGAATCGCTCGATGGGAGTGCTGGTGTT
ATCACCCGACTTTGTTAAGCCCTTCCGCCTCTTTCATTTTAGGAGAAAAGAAATGGAAAGTCAAGAAGTCAAGTATGTAG
GAGTCGATTGTGGAAAGAAAAGTATAGAGGTTGTTCGAATCAATTCGGAAAACTCACTCGAACGTAGACAATTCAGCACA
ACAGAAAGTGGTATTAACAATTTATTACAATGGTTGACCTTGAATGACATTGTAGGTCTGGATTTCTTAGCTTCGCTAAG
AGCCAACAGCAACGCTTCGCTGCTTTTTGGCAATCTCGCTCACCATGAATCGCTCGATTGGATCTCAATCTTTTAG

Upstream 100 bases:

>100_bases
CTCGTAACTCAATAACGCTACTTCCTATGGGTCGTAGCGTTAGGGCTTTGTAAGACCCCGTTTCATAGATGAATCCAAAT
CGGCCACCGCAAACCAAAGT

Downstream 100 bases:

>100_bases
AATTGCAAAATCAATATTAAACAAAGGGGTTCAAGTAATTGTCCTGAACCCAGGCAACCTGGCCACAATCTATCAATCTT
TAAAAAAAACAGATAAAGAA

Product: transposase, ISlin1

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 131; Mature: 130

Protein sequence:

>131_residues
MATQQSRPRRKLNISLFTNRSMGVLVLSPDFVKPFRLFHFRRKEMESQEVKYVGVDCGKKSIEVVRINSENSLERRQFST
TESGINNLLQWLTLNDIVGLDFLASLRANSNASLLFGNLAHHESLDWISIF

Sequences:

>Translated_131_residues
MATQQSRPRRKLNISLFTNRSMGVLVLSPDFVKPFRLFHFRRKEMESQEVKYVGVDCGKKSIEVVRINSENSLERRQFST
TESGINNLLQWLTLNDIVGLDFLASLRANSNASLLFGNLAHHESLDWISIF
>Mature_130_residues
ATQQSRPRRKLNISLFTNRSMGVLVLSPDFVKPFRLFHFRRKEMESQEVKYVGVDCGKKSIEVVRINSENSLERRQFSTT
ESGINNLLQWLTLNDIVGLDFLASLRANSNASLLFGNLAHHESLDWISIF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15072; Mature: 14941

Theoretical pI: Translated: 10.27; Mature: 10.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATQQSRPRRKLNISLFTNRSMGVLVLSPDFVKPFRLFHFRRKEMESQEVKYVGVDCGKK
CCCCCCCCCEEEEEEEEECCCCEEEEECCCCCCHHHHHHHHHHHCCCCCEEEEEECCCCC
SIEVVRINSENSLERRQFSTTESGINNLLQWLTLNDIVGLDFLASLRANSNASLLFGNLA
CEEEEEECCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCC
HHESLDWISIF
CCCCCCEEEEC
>Mature Secondary Structure 
ATQQSRPRRKLNISLFTNRSMGVLVLSPDFVKPFRLFHFRRKEMESQEVKYVGVDCGKK
CCCCCCCCEEEEEEEEECCCCEEEEECCCCCCHHHHHHHHHHHCCCCCEEEEEECCCCC
SIEVVRINSENSLERRQFSTTESGINNLLQWLTLNDIVGLDFLASLRANSNASLLFGNLA
CEEEEEECCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCC
HHESLDWISIF
CCCCCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA