Click here to switch to the map view.

The map label for this gene is 45656911

Identifier: 45656911

GI number: 45656911

Start: 1259919

End: 1260515

Strand: Direct

Name: 45656911

Synonym: LIC11027

Alternate gene names: NA

Gene position: 1259919-1260515 (Clockwise)

Preceding gene: 45656910

Following gene: 45656912

Centisome position: 29.46

GC content: 36.85

Gene sequence:

>597_bases
TTGAAAAATCAAAATATTTTAATATTCTTATTTTTTGTTTCAGGTATTTTTTTGACGGATTGTGTCATTAAATCTCCTTT
GATTACGTTTACTCAAACTCAGACAGCCGCGGAAAAACAGATGATCGGAGAAGATCGTATTTTGGAAAAAGACGGTTGGC
TCATTGCTTCTGTCAAAAATTCCTCTGCGGGTGCAGAAGTTTGGAAAAAAGATTTTTCGGGCGAGAATTATACTTTAGGA
GATAAAAATATTCTAATGTCCTTAAGGGCTCTCGCTTATTTGGCTCCGGAAATTAGAACCTGGAAGGAAGAAGGTTTTTT
GGCAGAAGGGTTGGACGGTAAACTTAGAATCAATCCGGCTGCTTCCGAGGCAGGAATTAAAAATGAACTTTCCAAAGCCG
AGGTAAAGTCCAGGCTCGAATCTTTGATTTCTCTTACCAATGAACATAGAAATAAAGTGGTTTTTAGTCGTTTCGAAAAC
GATTCTAAAACTGCTTCTAAAGAAAAGTCAGAACATTTAAAACTAACTTGGTATCGACTTGTAGAAAAAGGTGAATACTA
TGAAAAGTCTCCTGGCAAGTGGATTCGTAAGGAGTAG

Upstream 100 bases:

>100_bases
TTAGAAAATAGCCAGATCTCTCAACAGAGAATGCCTCTTGCAAATTTCCTTAAAAGGGCAAGATCCGAAGTGGATACGTA
TCGATGAAAAGGGGATAAAA

Downstream 100 bases:

>100_bases
ATTATGGTTCGATTTGGAATCTGCTTCTTTAGTTTTTTCTTTTTTTATCATTGTTCTATTTTTCGAGCGGCTTCCAGAAT
TAAACCTTTGGAATTCAATT

Product: hypothetical protein

Products: NA

Alternate protein names: Lipoprotein

Number of amino acids: Translated: 198; Mature: 198

Protein sequence:

>198_residues
MKNQNILIFLFFVSGIFLTDCVIKSPLITFTQTQTAAEKQMIGEDRILEKDGWLIASVKNSSAGAEVWKKDFSGENYTLG
DKNILMSLRALAYLAPEIRTWKEEGFLAEGLDGKLRINPAASEAGIKNELSKAEVKSRLESLISLTNEHRNKVVFSRFEN
DSKTASKEKSEHLKLTWYRLVEKGEYYEKSPGKWIRKE

Sequences:

>Translated_198_residues
MKNQNILIFLFFVSGIFLTDCVIKSPLITFTQTQTAAEKQMIGEDRILEKDGWLIASVKNSSAGAEVWKKDFSGENYTLG
DKNILMSLRALAYLAPEIRTWKEEGFLAEGLDGKLRINPAASEAGIKNELSKAEVKSRLESLISLTNEHRNKVVFSRFEN
DSKTASKEKSEHLKLTWYRLVEKGEYYEKSPGKWIRKE
>Mature_198_residues
MKNQNILIFLFFVSGIFLTDCVIKSPLITFTQTQTAAEKQMIGEDRILEKDGWLIASVKNSSAGAEVWKKDFSGENYTLG
DKNILMSLRALAYLAPEIRTWKEEGFLAEGLDGKLRINPAASEAGIKNELSKAEVKSRLESLISLTNEHRNKVVFSRFEN
DSKTASKEKSEHLKLTWYRLVEKGEYYEKSPGKWIRKE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22570; Mature: 22570

Theoretical pI: Translated: 9.28; Mature: 9.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNQNILIFLFFVSGIFLTDCVIKSPLITFTQTQTAAEKQMIGEDRILEKDGWLIASVKN
CCCCCEEEHHHHHHHHHHHHHHHHCCCEEEECHHHHHHHHHCCCCCEEECCCEEEEEECC
SSAGAEVWKKDFSGENYTLGDKNILMSLRALAYLAPEIRTWKEEGFLAEGLDGKLRINPA
CCCHHHHHHHHCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCEEEECCC
ASEAGIKNELSKAEVKSRLESLISLTNEHRNKVVFSRFENDSKTASKEKSEHLKLTWYRL
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEHHHHCCCCHHHHHHHHCCHHHHHHHH
VEKGEYYEKSPGKWIRKE
HHCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MKNQNILIFLFFVSGIFLTDCVIKSPLITFTQTQTAAEKQMIGEDRILEKDGWLIASVKN
CCCCCEEEHHHHHHHHHHHHHHHHCCCEEEECHHHHHHHHHCCCCCEEECCCEEEEEECC
SSAGAEVWKKDFSGENYTLGDKNILMSLRALAYLAPEIRTWKEEGFLAEGLDGKLRINPA
CCCHHHHHHHHCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCEEEECCC
ASEAGIKNELSKAEVKSRLESLISLTNEHRNKVVFSRFENDSKTASKEKSEHLKLTWYRL
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEHHHHCCCCHHHHHHHHCCHHHHHHHH
VEKGEYYEKSPGKWIRKE
HHCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA