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The map label for this gene is 45656777

Identifier: 45656777

GI number: 45656777

Start: 1071340

End: 1071720

Strand: Direct

Name: 45656777

Synonym: LIC10886

Alternate gene names: NA

Gene position: 1071340-1071720 (Clockwise)

Preceding gene: 45656776

Following gene: 45656791

Centisome position: 25.05

GC content: 38.06

Gene sequence:

>381_bases
ATGGGTCGTTCGATAAGTTACACGGGTGATTGTAAAAGATTCTCATCTGCAAAACAAGCGGCTTACTATGCTGGCTTAGT
TCCCAGAGTTGACATTTCTGGAGACACAGTTCGTTACGGAAGAATCATAAATCGAGGTTGTCATTCAATTCGAAGGGTGA
TTGTTCAAGAGGCTTGGAGTCTGGTTCGTTGTCAACACGGTGGTAAGGTAAAAGAGTTCTATCAAAGGTTATACCTTAAA
AAAGGTGCTAAAAAATCGATCATCGCTACTTCACGTAAAATGATCGAAGTTCTTTACGTAATGATTCGAACCGGAAAACT
TTTCGATTCTATGCCTGAGAATATATTAAATCGAAAATTAACTCAATATGGTCTTATGTAA

Upstream 100 bases:

>100_bases
TCAAAAAAAACAAAGCCTATGTTCAGACGATCATGTCTATGCCTGGAATTGGAATGATTACTTCTTTGGCAATCAAAGCA
AACTCAATATCTCACTCCCT

Downstream 100 bases:

>100_bases
TAAAATTGCGGAAGGGATTGACACAAGAAACATAGGAGAGAGCGTTGAGTTTGAAAAATTCCGAAGGAATTGTAGCAAAA
AAACTCAATGAAACGCTTTT

Product: transposase, ISlin1

Products: NA

Alternate protein names: ISlin1 Transposase

Number of amino acids: Translated: 126; Mature: 125

Protein sequence:

>126_residues
MGRSISYTGDCKRFSSAKQAAYYAGLVPRVDISGDTVRYGRIINRGCHSIRRVIVQEAWSLVRCQHGGKVKEFYQRLYLK
KGAKKSIIATSRKMIEVLYVMIRTGKLFDSMPENILNRKLTQYGLM

Sequences:

>Translated_126_residues
MGRSISYTGDCKRFSSAKQAAYYAGLVPRVDISGDTVRYGRIINRGCHSIRRVIVQEAWSLVRCQHGGKVKEFYQRLYLK
KGAKKSIIATSRKMIEVLYVMIRTGKLFDSMPENILNRKLTQYGLM
>Mature_125_residues
GRSISYTGDCKRFSSAKQAAYYAGLVPRVDISGDTVRYGRIINRGCHSIRRVIVQEAWSLVRCQHGGKVKEFYQRLYLKK
GAKKSIIATSRKMIEVLYVMIRTGKLFDSMPENILNRKLTQYGLM

Specific function: Unknown

COG id: COG3547

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14442; Mature: 14311

Theoretical pI: Translated: 10.76; Mature: 10.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
6.3 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGRSISYTGDCKRFSSAKQAAYYAGLVPRVDISGDTVRYGRIINRGCHSIRRVIVQEAWS
CCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
LVRCQHGGKVKEFYQRLYLKKGAKKSIIATSRKMIEVLYVMIRTGKLFDSMPENILNRKL
HHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHH
TQYGLM
HHHCCC
>Mature Secondary Structure 
GRSISYTGDCKRFSSAKQAAYYAGLVPRVDISGDTVRYGRIINRGCHSIRRVIVQEAWS
CCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
LVRCQHGGKVKEFYQRLYLKKGAKKSIIATSRKMIEVLYVMIRTGKLFDSMPENILNRKL
HHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHH
TQYGLM
HHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA