Click here to switch to the map view.

The map label for this gene is 45656689

Identifier: 45656689

GI number: 45656689

Start: 966692

End: 967123

Strand: Direct

Name: 45656689

Synonym: LIC10798

Alternate gene names: NA

Gene position: 966692-967123 (Clockwise)

Preceding gene: 45656688

Following gene: 45656692

Centisome position: 22.6

GC content: 32.64

Gene sequence:

>432_bases
ATGAATAATGTTTTTTTTATAATATTCCTTGGAATTGTTTTCGTATTTACCGATTGTCACAAGGAAGTTCCTCCTTCCTC
TCCACTTAGAAAAATCAATCTACAAACTTTTCTTAATTCCTCAGAAACGAAAAAATTTGCGGTTGAATTGGCTCATGGTA
AAATTGGAGTAAACGTATTCAATATTCCTAAATTACCTAAGAAAATTCATCTTGTTCTTCGAGATGACGATTGTGTTTAC
TATGTAATTCGTGGAAGTCTTCAGCTTACCTTACCTGGAGCTGAACCTATAATGTTACAATCAGAAGAGGTTCTTTTTAT
ACCGTCTGGAATCGTACATTCGATTTCGTCTGATCAAGTAAATTCAAAAGTACTAATGGTAAAAAGTTCCAATGTTTCTG
AAATTGAATACTTACAAGAACCTCAACCTTAA

Upstream 100 bases:

>100_bases
CTTGTAAAGACGTAACTGTCAATTTCGGATTTTAATCAAGTTTTTTGTAGGGAATCAATTCTTTTGGTTTCCTACAAGTC
TCTATTCTGAGTATCTGATT

Downstream 100 bases:

>100_bases
ACAAAATTTTGACGTTTTTATTTCGCGGTATTTGATGAAAATTCTATAGGAACTAAATCCTAAATAACGAGCGTATGAAA
TTTCCATAAAGGGCGTTCAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 143; Mature: 143

Protein sequence:

>143_residues
MNNVFFIIFLGIVFVFTDCHKEVPPSSPLRKINLQTFLNSSETKKFAVELAHGKIGVNVFNIPKLPKKIHLVLRDDDCVY
YVIRGSLQLTLPGAEPIMLQSEEVLFIPSGIVHSISSDQVNSKVLMVKSSNVSEIEYLQEPQP

Sequences:

>Translated_143_residues
MNNVFFIIFLGIVFVFTDCHKEVPPSSPLRKINLQTFLNSSETKKFAVELAHGKIGVNVFNIPKLPKKIHLVLRDDDCVY
YVIRGSLQLTLPGAEPIMLQSEEVLFIPSGIVHSISSDQVNSKVLMVKSSNVSEIEYLQEPQP
>Mature_143_residues
MNNVFFIIFLGIVFVFTDCHKEVPPSSPLRKINLQTFLNSSETKKFAVELAHGKIGVNVFNIPKLPKKIHLVLRDDDCVY
YVIRGSLQLTLPGAEPIMLQSEEVLFIPSGIVHSISSDQVNSKVLMVKSSNVSEIEYLQEPQP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16055; Mature: 16055

Theoretical pI: Translated: 6.94; Mature: 6.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNNVFFIIFLGIVFVFTDCHKEVPPSSPLRKINLQTFLNSSETKKFAVELAHGKIGVNVF
CCCEEEHHHHHHHHHHHHHHHCCCCCCCCEEEEHHHHCCCCCCEEEEEEEECCEEEEEEE
NIPKLPKKIHLVLRDDDCVYYVIRGSLQLTLPGAEPIMLQSEEVLFIPSGIVHSISSDQV
ECCCCCCEEEEEEECCCEEEEEEECEEEEEECCCCEEEEECCCEEEECCCHHCCCCCCCC
NSKVLMVKSSNVSEIEYLQEPQP
CCEEEEEECCCCCHHHHHCCCCC
>Mature Secondary Structure
MNNVFFIIFLGIVFVFTDCHKEVPPSSPLRKINLQTFLNSSETKKFAVELAHGKIGVNVF
CCCEEEHHHHHHHHHHHHHHHCCCCCCCCEEEEHHHHCCCCCCEEEEEEEECCEEEEEEE
NIPKLPKKIHLVLRDDDCVYYVIRGSLQLTLPGAEPIMLQSEEVLFIPSGIVHSISSDQV
ECCCCCCEEEEEEECCCEEEEEEECEEEEEECCCCEEEEECCCEEEECCCHHCCCCCCCC
NSKVLMVKSSNVSEIEYLQEPQP
CCEEEEEECCCCCHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA