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The map label for this gene is rsbQ [H]

Identifier: 45656451

GI number: 45656451

Start: 677905

End: 678705

Strand: Reverse

Name: rsbQ [H]

Synonym: LIC10553

Alternate gene names: 45656451

Gene position: 678705-677905 (Counterclockwise)

Preceding gene: 45656452

Following gene: 45656450

Centisome position: 15.87

GC content: 39.83

Gene sequence:

>801_bases
ATGCAAAGAGCATCTCTACACAACCTAAAAATTATTGGTTCCGAAAAGGAGACGATCGTATTCAGTCACGGATTTGGCTG
TGATCAATCGACTTGGAATAAGCTCATTCCTAATTTAAAAGACCATTATAGACTTGTACTTTTTGATACGATCGGTTCTG
GAAAAACAGATCCTTCCCTTTTCAGCGCGGATCGATATTCCAATCTTTATTCCTATGCAGAAGACCTGATCTTACTTATG
GATGAACTGAAAATTAGAAATTCATTATATGTAGGACATTCCGTAAGTGGAATGATCGGACTCATAACTTCGATCCGTAG
ACCGGAACTTTTTTCCAAACTTGCATTTATTAGCGCTTCTCCTCGTTATTTAAACGATACAAACTATAAAGGTGGGTTCG
AACAAACCGATTTGGATCAACTTTTCGCTGCGATGGAAACAAACTTTTTTTCTTGGGCGGGAGGATTCGCCCCCCTTGCT
ATGGGAAATCCGGATCGTCCCGAGTTGGCCCAAAGTTTTGCAGAATCGCTTCGGGAAATACGCCCGGATATAGGACTGAC
AGTTTCAAGAACCATCTTTCAATCCGATCATAGAAAAGATCTGAATCAATGCAAACAACCCGTTTTAATTTTGCAACCAT
CTTCAGATATAGCGGTTCCGATTGAAGTAGGAAAATATCTCAGCGCAAACATTCCTCAAGCGATTTTTAAATCGATTCCT
GCAACGGGGCATCTACCTCACTTCAGTTCTCCGGAATCTGTACTCCAAGAAATTAAATTGTTTTTTAAGTCTTTAAATTG
A

Upstream 100 bases:

>100_bases
TTAGAAAAGAATTAGATTAAAAAAATTCAAAAATTGCAGTCCTATCTGATAGTTAGAAAATTTCAAAAATCAGCCTCAAA
TATTTTTAAAAGAAAAACTC

Downstream 100 bases:

>100_bases
ATGAATGAGTCTTCTCATAAAACTTTTACCGATAAAATCAACGAATTCTATAAACGCTCATTTGAACTTTTTTCAAAGGG
ATCATATTTGGAGGAAATGG

Product: hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 266; Mature: 266

Protein sequence:

>266_residues
MQRASLHNLKIIGSEKETIVFSHGFGCDQSTWNKLIPNLKDHYRLVLFDTIGSGKTDPSLFSADRYSNLYSYAEDLILLM
DELKIRNSLYVGHSVSGMIGLITSIRRPELFSKLAFISASPRYLNDTNYKGGFEQTDLDQLFAAMETNFFSWAGGFAPLA
MGNPDRPELAQSFAESLREIRPDIGLTVSRTIFQSDHRKDLNQCKQPVLILQPSSDIAVPIEVGKYLSANIPQAIFKSIP
ATGHLPHFSSPESVLQEIKLFFKSLN

Sequences:

>Translated_266_residues
MQRASLHNLKIIGSEKETIVFSHGFGCDQSTWNKLIPNLKDHYRLVLFDTIGSGKTDPSLFSADRYSNLYSYAEDLILLM
DELKIRNSLYVGHSVSGMIGLITSIRRPELFSKLAFISASPRYLNDTNYKGGFEQTDLDQLFAAMETNFFSWAGGFAPLA
MGNPDRPELAQSFAESLREIRPDIGLTVSRTIFQSDHRKDLNQCKQPVLILQPSSDIAVPIEVGKYLSANIPQAIFKSIP
ATGHLPHFSSPESVLQEIKLFFKSLN
>Mature_266_residues
MQRASLHNLKIIGSEKETIVFSHGFGCDQSTWNKLIPNLKDHYRLVLFDTIGSGKTDPSLFSADRYSNLYSYAEDLILLM
DELKIRNSLYVGHSVSGMIGLITSIRRPELFSKLAFISASPRYLNDTNYKGGFEQTDLDQLFAAMETNFFSWAGGFAPLA
MGNPDRPELAQSFAESLREIRPDIGLTVSRTIFQSDHRKDLNQCKQPVLILQPSSDIAVPIEVGKYLSANIPQAIFKSIP
ATGHLPHFSSPESVLQEIKLFFKSLN

Specific function: Positive regulator required for energy stress activation of the sigma-B transcription factor. Could be required for rsbP phosphatase activity [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the AB hydrolase superfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000073 [H]

Pfam domain/function: PF00561 Abhydrolase_1 [H]

EC number: NA

Molecular weight: Translated: 29793; Mature: 29793

Theoretical pI: Translated: 6.89; Mature: 6.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQRASLHNLKIIGSEKETIVFSHGFGCDQSTWNKLIPNLKDHYRLVLFDTIGSGKTDPSL
CCCCCCCCEEEECCCCCEEEEECCCCCCHHHHHHHCCCHHHCEEEEEEEECCCCCCCCCH
FSADRYSNLYSYAEDLILLMDELKIRNSLYVGHSVSGMIGLITSIRRPELFSKLAFISAS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCHHHHHHHHHHHCCHHHHHHHHHHCCC
PRYLNDTNYKGGFEQTDLDQLFAAMETNFFSWAGGFAPLAMGNPDRPELAQSFAESLREI
CCCCCCCCCCCCCCCCCHHHHHHHHHCCHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHH
RPDIGLTVSRTIFQSDHRKDLNQCKQPVLILQPSSDIAVPIEVGKYLSANIPQAIFKSIP
CCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCEEEHHHCCHHCCCCHHHHHHHCC
ATGHLPHFSSPESVLQEIKLFFKSLN
CCCCCCCCCCHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MQRASLHNLKIIGSEKETIVFSHGFGCDQSTWNKLIPNLKDHYRLVLFDTIGSGKTDPSL
CCCCCCCCEEEECCCCCEEEEECCCCCCHHHHHHHCCCHHHCEEEEEEEECCCCCCCCCH
FSADRYSNLYSYAEDLILLMDELKIRNSLYVGHSVSGMIGLITSIRRPELFSKLAFISAS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCHHHHHHHHHHHCCHHHHHHHHHHCCC
PRYLNDTNYKGGFEQTDLDQLFAAMETNFFSWAGGFAPLAMGNPDRPELAQSFAESLREI
CCCCCCCCCCCCCCCCCHHHHHHHHHCCHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHH
RPDIGLTVSRTIFQSDHRKDLNQCKQPVLILQPSSDIAVPIEVGKYLSANIPQAIFKSIP
CCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCEEEHHHCCHHCCCCHHHHHHHCC
ATGHLPHFSSPESVLQEIKLFFKSLN
CCCCCCCCCCHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377; 10632888; 11591687 [H]