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The map label for this gene is 45656446

Identifier: 45656446

GI number: 45656446

Start: 670544

End: 671200

Strand: Reverse

Name: 45656446

Synonym: LIC10548

Alternate gene names: NA

Gene position: 671200-670544 (Counterclockwise)

Preceding gene: 45656447

Following gene: 45656441

Centisome position: 15.69

GC content: 40.18

Gene sequence:

>657_bases
TTGACTTCAGAGAAATTCTTTTTTAACTTGGATGAAGAAATTGTTATGAGCAAAGAAGAAAAACTGAAAAGACTGGGGCT
AATGCAATCCGAAGTTTCCGCGTGTAAACTCTGCAAACTCGAAACTACCCGTACTCAAACTGTTTTTGGAGAAGGAAATC
CAGATGCGGAATTAGTTTTTATTGGAGAAGGTCCTGGTAAACAAGAAGATCTCACAGGCCGTCCTTTTGTGGGAAAAGCG
GGCGAACTTTTGACAAGGATCATAGAAAAAGGAATGGGAGTTCCTAGAGAATCCGTTTACATCGCCAACATCGTAAAATG
CAGACCAACCGTGGACATGAAGTTTGAAAAAGATAGACCTCCCGAAGAAGAGGAAACTAGAGCTTGCGCTCCGTATCTTT
TAAGACAACTCGAAATCATTCAACCAAAAGCAATTGTTACTTTAGGAAATCCTTCTACAAGATTTATCTTAAATACTAAA
GAAGGAATTACTAAACTTAGAGGGACTTGGGGATCTTTTTTCGGAATCCCTGTGATGCCTACGTATCATCCTAGTTTTGT
GATTCGAAACGGAGGAGAGAATAGTCCTCTCAAACGAGACGTCTGGGAGGATATTAAAAAGGTTATGGATTTGTTGGGCT
GGAAAAGACCTTCGTAG

Upstream 100 bases:

>100_bases
AAACAATTTATGATTTTTTCGGGAAATGTTTCCAGAGAAATTGGAAAGTTTTTAAAATCCTGAAATACAAAAGTCAAGAT
GATACGAACAATCATTTCCA

Downstream 100 bases:

>100_bases
TTTCTTTTAACCAATCTGCAATTTTCTGATAAATATCGGAGGGGGCATCTTCATAGGCGAAAAGTCCTAGATGATCATAA
TCAATTGAAGCTCCGTTGTC

Product: uracil-DNA glycosylase

Products: diphosphate; DNAn+1

Alternate protein names: Uracil-DNA Glycosylase; Phage SPO1 DNA Polymerase-Like Protein; DNA Polymerase; DNA Polymerase Bacteriophage-Type; DNA-Directed DNA Polymerase; DNA Polymerase-Related Protein Bacteriophage-Type; Uracil-DNA Glycosylase Family 4 Protein; Uracil DNA Glycosylase Superfamily Protein; Phage Spo1 DNA Polymerase-Related Protein; DNA Polymerase-Related Protein; Phage SPO1 DNA Polymerase Domain-Containing Protein; DNA Polymerase Domain-Containing Protein; Phage Related DNA Polymerase; DNA Glycosylase; Uracil-DNA Glycosylase C-Terminal; Phage SpO1 DNA Polymerase-Related Protein; Bacteriophage-Type DNA Polymerase; DNA Polymerase Related Protein; Phage DNA Polymerase-Related Protein; DNA-Directed DNA Polymerase Bacteriophage-Type; Uracil-DNA Glycosylase Phage-Related Protein; Phage Shock Protein E; Phage DNA Polymerase; C-Terminal Part Of DNA Polymerase Bacteriophage-Type; Phage Spo1 DNA Polymerase Domain Protein; Uracil-DNA Glycosylase-Like Protein; Uracil-DNA Glycosylase-Related Protein; Bacteriophage-Type DNA Polymerase N-Terminal Domain Protein; N-Terminus Of Phage SPO1 DNA Polymerase

Number of amino acids: Translated: 218; Mature: 217

Protein sequence:

>218_residues
MTSEKFFFNLDEEIVMSKEEKLKRLGLMQSEVSACKLCKLETTRTQTVFGEGNPDAELVFIGEGPGKQEDLTGRPFVGKA
GELLTRIIEKGMGVPRESVYIANIVKCRPTVDMKFEKDRPPEEEETRACAPYLLRQLEIIQPKAIVTLGNPSTRFILNTK
EGITKLRGTWGSFFGIPVMPTYHPSFVIRNGGENSPLKRDVWEDIKKVMDLLGWKRPS

Sequences:

>Translated_218_residues
MTSEKFFFNLDEEIVMSKEEKLKRLGLMQSEVSACKLCKLETTRTQTVFGEGNPDAELVFIGEGPGKQEDLTGRPFVGKA
GELLTRIIEKGMGVPRESVYIANIVKCRPTVDMKFEKDRPPEEEETRACAPYLLRQLEIIQPKAIVTLGNPSTRFILNTK
EGITKLRGTWGSFFGIPVMPTYHPSFVIRNGGENSPLKRDVWEDIKKVMDLLGWKRPS
>Mature_217_residues
TSEKFFFNLDEEIVMSKEEKLKRLGLMQSEVSACKLCKLETTRTQTVFGEGNPDAELVFIGEGPGKQEDLTGRPFVGKAG
ELLTRIIEKGMGVPRESVYIANIVKCRPTVDMKFEKDRPPEEEETRACAPYLLRQLEIIQPKAIVTLGNPSTRFILNTKE
GITKLRGTWGSFFGIPVMPTYHPSFVIRNGGENSPLKRDVWEDIKKVMDLLGWKRPS

Specific function: Unknown

COG id: COG1573

COG function: function code L; Uracil-DNA glycosylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 2.7.7.7

Molecular weight: Translated: 24653; Mature: 24522

Theoretical pI: Translated: 8.31; Mature: 8.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSEKFFFNLDEEIVMSKEEKLKRLGLMQSEVSACKLCKLETTRTQTVFGEGNPDAELVF
CCCCCEEEECCHHHHHCHHHHHHHHCCHHHHHHHHHHHCCCCCCCEEEECCCCCCEEEEE
IGEGPGKQEDLTGRPFVGKAGELLTRIIEKGMGVPRESVYIANIVKCRPTVDMKFEKDRP
EECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCHHEEEEEEEEECCCCCCEECCCCC
PEEEETRACAPYLLRQLEIIQPKAIVTLGNPSTRFILNTKEGITKLRGTWGSFFGIPVMP
CCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCEEEEEECHHHHHHHHCCCCCCCCCCCCC
TYHPSFVIRNGGENSPLKRDVWEDIKKVMDLLGWKRPS
CCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
TSEKFFFNLDEEIVMSKEEKLKRLGLMQSEVSACKLCKLETTRTQTVFGEGNPDAELVF
CCCCEEEECCHHHHHCHHHHHHHHCCHHHHHHHHHHHCCCCCCCEEEECCCCCCEEEEE
IGEGPGKQEDLTGRPFVGKAGELLTRIIEKGMGVPRESVYIANIVKCRPTVDMKFEKDRP
EECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCHHEEEEEEEEECCCCCCEECCCCC
PEEEETRACAPYLLRQLEIIQPKAIVTLGNPSTRFILNTKEGITKLRGTWGSFFGIPVMP
CCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCEEEEEECHHHHHHHHCCCCCCCCCCCCC
TYHPSFVIRNGGENSPLKRDVWEDIKKVMDLLGWKRPS
CCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: deoxynucleoside triphosphate; DNAn

Specific reaction: deoxynucleoside triphosphate + DNA(n) = diphosphate + DNA(n+1)

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA