Definition | Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130 chromosome chromosome I, complete sequence. |
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Accession | NC_005823 |
Length | 4,277,185 |
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The map label for this gene is crcB
Identifier: 45656364
GI number: 45656364
Start: 537545
End: 537928
Strand: Reverse
Name: crcB
Synonym: LIC10466
Alternate gene names: 45656364
Gene position: 537928-537545 (Counterclockwise)
Preceding gene: 45656365
Following gene: 45656363
Centisome position: 12.58
GC content: 35.42
Gene sequence:
>384_bases ATGAATTTTTCAAAAAGTTTATTATTAATCGCCTTTGGTGGCGCAATTGGTAGCATTTTCCGCTATTTGTTACAATACTG GTTTGGAAACGTTTTAGGCTATTCTCTTCCTTGGGGAACTTTAACTGCAAACTTACTTGGTTCTTTTTTAATCGGAGTTG TTTATGCAATATCCGATCGTTTTCCACTCTTTGACCCTCAATGGAAGTTTTTATTGGCTTCTGGTTTTTGCGGAGGATTT ACGACATTCTCCACTTTTTCCTACGAAACCTTTCAAATGTTAAAGTCAGGTCATTACATTTTATTTTTAGGGTATATCTG TTTGAGTGTGGTTGGTGGAATTGGTTTTGCTTTCGCTGGAGTTTGGATGATAAAAAATTTTTGA
Upstream 100 bases:
>100_bases GAACTGCCTCAATCGACTATTTCATAAAACAGAAACAAGATAGAGAATTAATTTTTTAACAACTCTAATATTATATTCGT ACATTAAAATTTACTACATT
Downstream 100 bases:
>100_bases TAAACCATGCATAACTTCTTAAGTTATACGAAATATAAATTCAATTAAACATCGTTATACGATACCAAAAAACATTTCTT AAATAATACCTAATTTATTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 127; Mature: 127
Protein sequence:
>127_residues MNFSKSLLLIAFGGAIGSIFRYLLQYWFGNVLGYSLPWGTLTANLLGSFLIGVVYAISDRFPLFDPQWKFLLASGFCGGF TTFSTFSYETFQMLKSGHYILFLGYICLSVVGGIGFAFAGVWMIKNF
Sequences:
>Translated_127_residues MNFSKSLLLIAFGGAIGSIFRYLLQYWFGNVLGYSLPWGTLTANLLGSFLIGVVYAISDRFPLFDPQWKFLLASGFCGGF TTFSTFSYETFQMLKSGHYILFLGYICLSVVGGIGFAFAGVWMIKNF >Mature_127_residues MNFSKSLLLIAFGGAIGSIFRYLLQYWFGNVLGYSLPWGTLTANLLGSFLIGVVYAISDRFPLFDPQWKFLLASGFCGGF TTFSTFSYETFQMLKSGHYILFLGYICLSVVGGIGFAFAGVWMIKNF
Specific function: Not Known. Overproduction Leads To Camphor Resistance And Chromosome Condensation; Deletion Increases Sensibility To Nucleoid Decondensation. Probably Interacts With The Heat-Shock Protein Cspe, Possibly Providing A Way To Anchor The Chromosome To The Mem
COG id: COG0239
COG function: function code D; Integral membrane protein possibly involved in chromosome condensation
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CrcB family
Homologues:
Organism=Escherichia coli, GI1786842, Length=93, Percent_Identity=49.4623655913978, Blast_Score=86, Evalue=6e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): CRCB_LEPIC (Q72V37)
Other databases:
- EMBL: AE016823 - RefSeq: YP_000450.1 - GeneID: 2771971 - GenomeReviews: AE016823_GR - KEGG: lic:LIC10466 - NMPDR: fig|267671.1.peg.450 - HOGENOM: HBG753179 - OMA: LISELCV - ProtClustDB: CLSK223107 - BioCyc: LINT267671:LIC_10466-MONOMER - HAMAP: MF_00454 - InterPro: IPR003691 - TIGRFAMs: TIGR00494
Pfam domain/function: PF02537 CRCB
EC number: NA
Molecular weight: Translated: 14143; Mature: 14143
Theoretical pI: Translated: 9.07; Mature: 9.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0xd5ca174)-; HASH(0xe9c6194)-; HASH(0xd385988)-; HASH(0xe9ec460)-;
Cys/Met content:
1.6 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNFSKSLLLIAFGGAIGSIFRYLLQYWFGNVLGYSLPWGTLTANLLGSFLIGVVYAISDR CCCCHHHHEEEECHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCC FPLFDPQWKFLLASGFCGGFTTFSTFSYETFQMLKSGHYILFLGYICLSVVGGIGFAFAG CCCCCCCHHHHHHCCCCCCHHHHHHCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH VWMIKNF HHHHCCH >Mature Secondary Structure MNFSKSLLLIAFGGAIGSIFRYLLQYWFGNVLGYSLPWGTLTANLLGSFLIGVVYAISDR CCCCHHHHEEEECHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCC FPLFDPQWKFLLASGFCGGFTTFSTFSYETFQMLKSGHYILFLGYICLSVVGGIGFAFAG CCCCCCCHHHHHHCCCCCCHHHHHHCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH VWMIKNF HHHHCCH
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA