Definition | Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130 chromosome chromosome I, complete sequence. |
---|---|
Accession | NC_005823 |
Length | 4,277,185 |
Click here to switch to the map view.
The map label for this gene is 45656365
Identifier: 45656365
GI number: 45656365
Start: 539373
End: 539564
Strand: Reverse
Name: 45656365
Synonym: LIC10467
Alternate gene names: NA
Gene position: 539564-539373 (Counterclockwise)
Preceding gene: 45656366
Following gene: 45656364
Centisome position: 12.61
GC content: 34.38
Gene sequence:
>192_bases TTGATAATTTTAATCTATTGGATTCCTCCGAATTTGGTCCCTGGACCGGTGGACGATTCCATTGTGACAATTGGAGTCGG AATCTATCAGATCTATCGTTATTTTAAGATCAGTAGTTCTTCAAAAATACACGATTCAACCAATCTATTAAAATCTAAAA TAGGCAATCCTTACGTGATAAATCCCTATTAA
Upstream 100 bases:
>100_bases TCTTCGGCGGAATTCTCGTATCGATTCTCCTCGCGTTGGTCTTTGGTTTGCGATCAAGGATTCAAAACCGGTCGAAACGC TTAGAATCTTTTGGCCCGTC
Downstream 100 bases:
>100_bases AATAACATGAGTTAGACGTAAGAAAAATCTGGGCAAATCCGGCCGCCACGGGCAGGCAAGACCGAGTTCTCGTCTATAGC CAATCAATTGCATGCAAAAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 63; Mature: 63
Protein sequence:
>63_residues MIILIYWIPPNLVPGPVDDSIVTIGVGIYQIYRYFKISSSSKIHDSTNLLKSKIGNPYVINPY
Sequences:
>Translated_63_residues MIILIYWIPPNLVPGPVDDSIVTIGVGIYQIYRYFKISSSSKIHDSTNLLKSKIGNPYVINPY >Mature_63_residues MIILIYWIPPNLVPGPVDDSIVTIGVGIYQIYRYFKISSSSKIHDSTNLLKSKIGNPYVINPY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7126; Mature: 7126
Theoretical pI: Translated: 9.39; Mature: 9.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIILIYWIPPNLVPGPVDDSIVTIGVGIYQIYRYFKISSSSKIHDSTNLLKSKIGNPYVI CEEEEEECCCCCCCCCCCCCEEEECHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCEEE NPY CCC >Mature Secondary Structure MIILIYWIPPNLVPGPVDDSIVTIGVGIYQIYRYFKISSSSKIHDSTNLLKSKIGNPYVI CEEEEEECCCCCCCCCCCCCEEEECHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCEEE NPY CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA