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The map label for this gene is 45656295

Identifier: 45656295

GI number: 45656295

Start: 451514

End: 452125

Strand: Reverse

Name: 45656295

Synonym: LIC10395

Alternate gene names: NA

Gene position: 452125-451514 (Counterclockwise)

Preceding gene: 45656298

Following gene: 45656293

Centisome position: 10.57

GC content: 37.91

Gene sequence:

>612_bases
ATGACCGTGACGAGACACAAGAGAAGATCTAGAAACAGTTTAAATAGAGAGAATATCGTACAAGTGGCGATGGAAATCCT
TCAAGAAAAAGGGATCGACAGACTTTCCATGAGAAAGATCGCTGAAAAATTAAACTGCAGCGTAGCAAGTCCGTATTCTC
ATTTCACAAGTCAGGAAGAAATTATACAAGTACTGATTGCTAAAGGAGAAACCGAACTGACTCAACTTTTACGAAACGCA
CAGAAAAACGGAAAAAACGCATTCGAGCAGTTAGCGGGAATCGCACGAGCTTATTGGGACTTTTCCTTAAATAATAAAGA
ATTACATAAAGTAATGTTTAATACGGTTCACGGACATATGCACAGAAAGGCGTTTCCAAGTTTACCTACCAGTTATAGAG
TGTTTTTAGAAACCATACGAAATGGTTGTATCAACCAAGAATTCAAACTACCTAAATCAGAATATCCAGCAATCGCAAGA
ATGATGTGGGCGTGGATGTATGGACTGATGGTATTAGATCTTACGAATATGCTCAAACGTCGCCGTGGAGGAAAAGACGA
TCCTCTAGCAGAAGGTTTTTTATATTTCCAAAAAATTCTTTTAGAAGAATAA

Upstream 100 bases:

>100_bases
TTCGTTTGATTTTTTTGATAAAGTAGAATTGAATTTAAAAAACTACAAATATAAAAGAGACATTTAGCGATTCATAACTT
GCTAAAGTAAAATCTAAAAA

Downstream 100 bases:

>100_bases
ATTTTCAGATAACTCTAAAATTATAAAAAGATTTCTAGATTTTCAAATACAATTCTGAGAAGTTTTATTCAAATAACAAC
AATGTGTATTTAAAAATGTA

Product: TetR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator TetR Family; Transcriptional Regulator; Regulatory Protein TetR

Number of amino acids: Translated: 203; Mature: 202

Protein sequence:

>203_residues
MTVTRHKRRSRNSLNRENIVQVAMEILQEKGIDRLSMRKIAEKLNCSVASPYSHFTSQEEIIQVLIAKGETELTQLLRNA
QKNGKNAFEQLAGIARAYWDFSLNNKELHKVMFNTVHGHMHRKAFPSLPTSYRVFLETIRNGCINQEFKLPKSEYPAIAR
MMWAWMYGLMVLDLTNMLKRRRGGKDDPLAEGFLYFQKILLEE

Sequences:

>Translated_203_residues
MTVTRHKRRSRNSLNRENIVQVAMEILQEKGIDRLSMRKIAEKLNCSVASPYSHFTSQEEIIQVLIAKGETELTQLLRNA
QKNGKNAFEQLAGIARAYWDFSLNNKELHKVMFNTVHGHMHRKAFPSLPTSYRVFLETIRNGCINQEFKLPKSEYPAIAR
MMWAWMYGLMVLDLTNMLKRRRGGKDDPLAEGFLYFQKILLEE
>Mature_202_residues
TVTRHKRRSRNSLNRENIVQVAMEILQEKGIDRLSMRKIAEKLNCSVASPYSHFTSQEEIIQVLIAKGETELTQLLRNAQ
KNGKNAFEQLAGIARAYWDFSLNNKELHKVMFNTVHGHMHRKAFPSLPTSYRVFLETIRNGCINQEFKLPKSEYPAIARM
MWAWMYGLMVLDLTNMLKRRRGGKDDPLAEGFLYFQKILLEE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23677; Mature: 23546

Theoretical pI: Translated: 10.27; Mature: 10.27

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
4.9 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTVTRHKRRSRNSLNRENIVQVAMEILQEKGIDRLSMRKIAEKLNCSVASPYSHFTSQEE
CCCCHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCHHHHHCCHHH
IIQVLIAKGETELTQLLRNAQKNGKNAFEQLAGIARAYWDFSLNNKELHKVMFNTVHGHM
HHHHHHHCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
HRKAFPSLPTSYRVFLETIRNGCINQEFKLPKSEYPAIARMMWAWMYGLMVLDLTNMLKR
HHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
RRGGKDDPLAEGFLYFQKILLEE
HCCCCCCHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TVTRHKRRSRNSLNRENIVQVAMEILQEKGIDRLSMRKIAEKLNCSVASPYSHFTSQEE
CCCHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCHHHHHCCHHH
IIQVLIAKGETELTQLLRNAQKNGKNAFEQLAGIARAYWDFSLNNKELHKVMFNTVHGHM
HHHHHHHCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
HRKAFPSLPTSYRVFLETIRNGCINQEFKLPKSEYPAIARMMWAWMYGLMVLDLTNMLKR
HHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
RRGGKDDPLAEGFLYFQKILLEE
HCCCCCCHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA