Click here to switch to the map view.

The map label for this gene is 45656298

Identifier: 45656298

GI number: 45656298

Start: 454818

End: 456149

Strand: Reverse

Name: 45656298

Synonym: LIC10398

Alternate gene names: NA

Gene position: 456149-454818 (Counterclockwise)

Preceding gene: 45656299

Following gene: 45656295

Centisome position: 10.66

GC content: 36.34

Gene sequence:

>1332_bases
ATGAAAAATAATTTTTTTTTCAAATTAGCGATATTCACTCTTATATTAAATTGTTCTTTTCCTACAAAAGAATCGGAAAT
ACTAAGTTCTAATCAGGTACTTCCATTTTTCACTTTAGGAATTGGCAAAGATTCCCTCAAATCAATCGGTAAAAAACGTT
GGTTTTTTGGGGTCAAATCGATTCTTTTACATCATACTTACGGTTTAAAGGCGGGAGAATACTTAGACAAAAGTAAATCC
TCAGGATGGATGGTGCATTTTATCGTTCTTGAAAACGGAAGTGTATACGGAGTAGAAGAGCCCTCTAAAATACTTTACAA
AGCCGCACCTGGAATGGACGAAACCACAATCCACGTTTCTTGGGAAGGAAACAACGATTCCATTTTAAAAAACGAAGTTC
AATTAAAATCTCTCGTCAATCTGATTGAAACTCTTTCAAAAAAACATTCAATTCCTCTAAATAACTACGATATTACTTCT
AAAAAAGGAATTTTTACACATACTCAGAGTAAGAAAAAATTTGGTCGTTTTTTAGATACCGGGGAATGTGGAAGTGAAAA
AGTTTTATCTTCCGTTCTTTTAAAACTCCAAGGAAAATTTTTTTCAGAAACAGAATGGAAAGATCGGTTTGACTCCGGTT
GGGTAATTCGTAAGGAAAAATTTACAGATCCGTCTGGTAAAAAAATCGTTCCAACATACAACCGAGGCAGAGGTACAACT
TCCGCACCAATCATAGAATTGAATTCCGTAGAAAAAACGTCCGATGGAAAAGCTCCTGAAGAAAAAAGACTTCGTTATAA
TCAGCGTGGATCTATTTCTCCCGATTGTATCGTGTTGCACTTTACCGCAATTCCTGATTATCAAAAAACTTTAGAAGTAT
TAGAAAAACGGAATTTATCCGCTACGTTTCTCGCAGATCAAGATGGAAAAGTCTATCAACTTTTGGATTCTATCTTGGAC
GCGGCTGCGGCTGCGGCTGGAACTAACTCGAACTGCTTTCAAGTGGAAATTGTAGGAAAAGATACAGAAATGCTTTTAGC
CAATCAGGAACAGACCAAAGCGGTTGTTCGTCTCGTAAAAGAACTTTCCGAAAAATATAAGATTCCTCTGAACAATGAAC
GAATAGAATCCTTACGAGGTGTATATTCTCATACACAAGCCAAAAAAAAATGGGGAGGTTCCATTTATCTTGACGGAAAG
GATTTTGATCCCGGCGAATCTTATATGAAAGAAGTTTTAGAACAAGCAGGCGGGACTTATTATCCGGAAGAAAACTGGTT
CGATAGACAGAGCGAAAATTGGATTCTTTTATTTACCGATTTTCAACCCTGA

Upstream 100 bases:

>100_bases
TTTATGAATATTCAGAAATTATTAATCGCCATAGAAAACTTTCCAAAAACCTAGAAAAACTAAGAGAAGATTTAACTCGA
CTACGAAATAAGGTATCGAG

Downstream 100 bases:

>100_bases
CAGATCGATAATATTTAATTAGAACCATTACTATAAATAGAAAACTATGTAGTTCAAGTTTTGGTTTGTTATTTCAACAA
AAACTTATTAGTAGAACTAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 443; Mature: 443

Protein sequence:

>443_residues
MKNNFFFKLAIFTLILNCSFPTKESEILSSNQVLPFFTLGIGKDSLKSIGKKRWFFGVKSILLHHTYGLKAGEYLDKSKS
SGWMVHFIVLENGSVYGVEEPSKILYKAAPGMDETTIHVSWEGNNDSILKNEVQLKSLVNLIETLSKKHSIPLNNYDITS
KKGIFTHTQSKKKFGRFLDTGECGSEKVLSSVLLKLQGKFFSETEWKDRFDSGWVIRKEKFTDPSGKKIVPTYNRGRGTT
SAPIIELNSVEKTSDGKAPEEKRLRYNQRGSISPDCIVLHFTAIPDYQKTLEVLEKRNLSATFLADQDGKVYQLLDSILD
AAAAAAGTNSNCFQVEIVGKDTEMLLANQEQTKAVVRLVKELSEKYKIPLNNERIESLRGVYSHTQAKKKWGGSIYLDGK
DFDPGESYMKEVLEQAGGTYYPEENWFDRQSENWILLFTDFQP

Sequences:

>Translated_443_residues
MKNNFFFKLAIFTLILNCSFPTKESEILSSNQVLPFFTLGIGKDSLKSIGKKRWFFGVKSILLHHTYGLKAGEYLDKSKS
SGWMVHFIVLENGSVYGVEEPSKILYKAAPGMDETTIHVSWEGNNDSILKNEVQLKSLVNLIETLSKKHSIPLNNYDITS
KKGIFTHTQSKKKFGRFLDTGECGSEKVLSSVLLKLQGKFFSETEWKDRFDSGWVIRKEKFTDPSGKKIVPTYNRGRGTT
SAPIIELNSVEKTSDGKAPEEKRLRYNQRGSISPDCIVLHFTAIPDYQKTLEVLEKRNLSATFLADQDGKVYQLLDSILD
AAAAAAGTNSNCFQVEIVGKDTEMLLANQEQTKAVVRLVKELSEKYKIPLNNERIESLRGVYSHTQAKKKWGGSIYLDGK
DFDPGESYMKEVLEQAGGTYYPEENWFDRQSENWILLFTDFQP
>Mature_443_residues
MKNNFFFKLAIFTLILNCSFPTKESEILSSNQVLPFFTLGIGKDSLKSIGKKRWFFGVKSILLHHTYGLKAGEYLDKSKS
SGWMVHFIVLENGSVYGVEEPSKILYKAAPGMDETTIHVSWEGNNDSILKNEVQLKSLVNLIETLSKKHSIPLNNYDITS
KKGIFTHTQSKKKFGRFLDTGECGSEKVLSSVLLKLQGKFFSETEWKDRFDSGWVIRKEKFTDPSGKKIVPTYNRGRGTT
SAPIIELNSVEKTSDGKAPEEKRLRYNQRGSISPDCIVLHFTAIPDYQKTLEVLEKRNLSATFLADQDGKVYQLLDSILD
AAAAAAGTNSNCFQVEIVGKDTEMLLANQEQTKAVVRLVKELSEKYKIPLNNERIESLRGVYSHTQAKKKWGGSIYLDGK
DFDPGESYMKEVLEQAGGTYYPEENWFDRQSENWILLFTDFQP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 3.5.1.28

Molecular weight: Translated: 50162; Mature: 50162

Theoretical pI: Translated: 8.72; Mature: 8.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNNFFFKLAIFTLILNCSFPTKESEILSSNQVLPFFTLGIGKDSLKSIGKKRWFFGVKS
CCCCEEEHHHHHHHHHCCCCCCCHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHH
ILLHHTYGLKAGEYLDKSKSSGWMVHFIVLENGSVYGVEEPSKILYKAAPGMDETTIHVS
HHHHHHCCCCHHHHHHCCCCCCEEEEEEEEECCCEECCCCCHHHHEEECCCCCCEEEEEE
WEGNNDSILKNEVQLKSLVNLIETLSKKHSIPLNNYDITSKKGIFTHTQSKKKFGRFLDT
EECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEECCCCHHHHHHHCCC
GECGSEKVLSSVLLKLQGKFFSETEWKDRFDSGWVIRKEKFTDPSGKKIVPTYNRGRGTT
CCCCHHHHHHHHHHHHCCCCCCCCCHHHCCCCCEEEEECCCCCCCCCEEECCCCCCCCCC
SAPIIELNSVEKTSDGKAPEEKRLRYNQRGSISPDCIVLHFTAIPDYQKTLEVLEKRNLS
CCCEEEECCCCCCCCCCCCHHHHHCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHCCCC
ATFLADQDGKVYQLLDSILDAAAAAAGTNSNCFQVEIVGKDTEMLLANQEQTKAVVRLVK
EEEEECCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCEEECCCHHHHHHHHHHH
ELSEKYKIPLNNERIESLRGVYSHTQAKKKWGGSIYLDGKDFDPGESYMKEVLEQAGGTY
HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCHHHHHHHHHHHCCCCC
YPEENWFDRQSENWILLFTDFQP
CCCCCCCCCCCCCEEEEEECCCC
>Mature Secondary Structure
MKNNFFFKLAIFTLILNCSFPTKESEILSSNQVLPFFTLGIGKDSLKSIGKKRWFFGVKS
CCCCEEEHHHHHHHHHCCCCCCCHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHH
ILLHHTYGLKAGEYLDKSKSSGWMVHFIVLENGSVYGVEEPSKILYKAAPGMDETTIHVS
HHHHHHCCCCHHHHHHCCCCCCEEEEEEEEECCCEECCCCCHHHHEEECCCCCCEEEEEE
WEGNNDSILKNEVQLKSLVNLIETLSKKHSIPLNNYDITSKKGIFTHTQSKKKFGRFLDT
EECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEECCCCHHHHHHHCCC
GECGSEKVLSSVLLKLQGKFFSETEWKDRFDSGWVIRKEKFTDPSGKKIVPTYNRGRGTT
CCCCHHHHHHHHHHHHCCCCCCCCCHHHCCCCCEEEEECCCCCCCCCEEECCCCCCCCCC
SAPIIELNSVEKTSDGKAPEEKRLRYNQRGSISPDCIVLHFTAIPDYQKTLEVLEKRNLS
CCCEEEECCCCCCCCCCCCHHHHHCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHCCCC
ATFLADQDGKVYQLLDSILDAAAAAAGTNSNCFQVEIVGKDTEMLLANQEQTKAVVRLVK
EEEEECCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCEEECCCHHHHHHHHHHH
ELSEKYKIPLNNERIESLRGVYSHTQAKKKWGGSIYLDGKDFDPGESYMKEVLEQAGGTY
HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCHHHHHHHHHHHCCCCC
YPEENWFDRQSENWILLFTDFQP
CCCCCCCCCCCCCEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA