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The map label for this gene is acrR [C]

Identifier: 45656275

GI number: 45656275

Start: 424630

End: 425316

Strand: Reverse

Name: acrR [C]

Synonym: LIC10375

Alternate gene names: 45656275

Gene position: 425316-424630 (Counterclockwise)

Preceding gene: 45656276

Following gene: 45656274

Centisome position: 9.94

GC content: 31.73

Gene sequence:

>687_bases
ATGATTCGGAAAAAAACCACAAAACAAAAAGAGACCGGCAAATCACAACAAACTCGGTCTCTTCTTTTTAAAACCGCAAT
TTTATCTTTTCAAAAAGAAGGTTATGACGAAACTACGATGCGTACCATAGCTAAAAAAGCAGGTTTGGCAGTAGGAGCAT
CTTACTATCATTTTAAAACAAAAGAAGAAATTGTTCTAGAATTTTATAGAACTACTCAAGAAGAAGCAAATATTCAAAAT
ATTGAATTCTGTAAATCCAATTTAGATCTTAAGGATAGGATCAAAAACATAATTCGATTTAAACTTGGGCAATTTATCGG
TTACGAAAAATTTTTACACGTTCTTTCTAGAAGTGGCGGAGATCCCAAACATCCTCTTTCTCCGTTTAGCAAGGAAACAA
AACAAATTCGAGAAGACGCAATTTCCATTTTTAGGAACGCAATTTTGGATTCAAAAAATCCTTTTCCTTCCGATCTAAAA
GAAGACCTTCCTTTGTTATTTTGGCTTTTTCAACTCGGAATTATATACGTTTGGCTTTTTGATGAATCCACTCATAAAAG
AAAAACTGAACTTTTAATCGACAAAGGGTTAGATCTAATATTCCAACTTTTGAAACTATCTTCACTTCCAATTTTTAAAT
CTGTTCGCAAATCAATTTTATCATTAGTAAACCTCTTTAAGAAATGA

Upstream 100 bases:

>100_bases
TCCTTTTAATCCTAGGAGCAATGCACTTTTTCAATCTATTTTTGTTTGCAAAATTCAGAAAGAAAATCTCAAATACTTTC
GGAGAATCTTAAATCCCGAT

Downstream 100 bases:

>100_bases
TTTCAAAGTAAATTTAAATGCGCCTTAAAGAAATAGACACCCTCCCGCCAAAAGATAAACTCAAAGAAGAAGTGATTCAA
AAAACGGAAGAATACATTAA

Product: TetR family transcriptional regulator

Products: NA

Alternate protein names: TetR-Family Transcriptional Regulator; Transcriptional Regulator TetR Family; Regulatory Protein TetR; Transcriptional Regulator

Number of amino acids: Translated: 228; Mature: 228

Protein sequence:

>228_residues
MIRKKTTKQKETGKSQQTRSLLFKTAILSFQKEGYDETTMRTIAKKAGLAVGASYYHFKTKEEIVLEFYRTTQEEANIQN
IEFCKSNLDLKDRIKNIIRFKLGQFIGYEKFLHVLSRSGGDPKHPLSPFSKETKQIREDAISIFRNAILDSKNPFPSDLK
EDLPLLFWLFQLGIIYVWLFDESTHKRKTELLIDKGLDLIFQLLKLSSLPIFKSVRKSILSLVNLFKK

Sequences:

>Translated_228_residues
MIRKKTTKQKETGKSQQTRSLLFKTAILSFQKEGYDETTMRTIAKKAGLAVGASYYHFKTKEEIVLEFYRTTQEEANIQN
IEFCKSNLDLKDRIKNIIRFKLGQFIGYEKFLHVLSRSGGDPKHPLSPFSKETKQIREDAISIFRNAILDSKNPFPSDLK
EDLPLLFWLFQLGIIYVWLFDESTHKRKTELLIDKGLDLIFQLLKLSSLPIFKSVRKSILSLVNLFKK
>Mature_228_residues
MIRKKTTKQKETGKSQQTRSLLFKTAILSFQKEGYDETTMRTIAKKAGLAVGASYYHFKTKEEIVLEFYRTTQEEANIQN
IEFCKSNLDLKDRIKNIIRFKLGQFIGYEKFLHVLSRSGGDPKHPLSPFSKETKQIREDAISIFRNAILDSKNPFPSDLK
EDLPLLFWLFQLGIIYVWLFDESTHKRKTELLIDKGLDLIFQLLKLSSLPIFKSVRKSILSLVNLFKK

Specific function: Potential Regulator Protein For The Acrab Genes. [C]

COG id: COG1309

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26558; Mature: 26558

Theoretical pI: Translated: 10.38; Mature: 10.38

Prosite motif: PS50977 HTH_TETR_2 ; PS00214 FABP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIRKKTTKQKETGKSQQTRSLLFKTAILSFQKEGYDETTMRTIAKKAGLAVGASYYHFKT
CCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHCC
KEEIVLEFYRTTQEEANIQNIEFCKSNLDLKDRIKNIIRFKLGQFIGYEKFLHVLSRSGG
HHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
DPKHPLSPFSKETKQIREDAISIFRNAILDSKNPFPSDLKEDLPLLFWLFQLGIIYVWLF
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHEE
DESTHKRKTELLIDKGLDLIFQLLKLSSLPIFKSVRKSILSLVNLFKK
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MIRKKTTKQKETGKSQQTRSLLFKTAILSFQKEGYDETTMRTIAKKAGLAVGASYYHFKT
CCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHCC
KEEIVLEFYRTTQEEANIQNIEFCKSNLDLKDRIKNIIRFKLGQFIGYEKFLHVLSRSGG
HHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
DPKHPLSPFSKETKQIREDAISIFRNAILDSKNPFPSDLKEDLPLLFWLFQLGIIYVWLF
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHEE
DESTHKRKTELLIDKGLDLIFQLLKLSSLPIFKSVRKSILSLVNLFKK
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA