Definition | Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130 chromosome chromosome I, complete sequence. |
---|---|
Accession | NC_005823 |
Length | 4,277,185 |
Click here to switch to the map view.
The map label for this gene is 45656274
Identifier: 45656274
GI number: 45656274
Start: 423893
End: 424612
Strand: Reverse
Name: 45656274
Synonym: LIC10374
Alternate gene names: NA
Gene position: 424612-423893 (Counterclockwise)
Preceding gene: 45656275
Following gene: 45656273
Centisome position: 9.93
GC content: 33.61
Gene sequence:
>720_bases ATGCGCCTTAAAGAAATAGACACCCTCCCGCCAAAAGATAAACTCAAAGAAGAAGTGATTCAAAAAACGGAAGAATACAT TAAGAATCTTTCTTATCTTCAAGAAAAGTTATATGCGCTAAAAAAACATTCGATTCTTATTATATTACAAGGTGTAGATA CGGCCGGTAAAGATAGCACGATCAAACATGTTTTTGCCGGAATCAATCCTCAAGGTTGTTATGTTAAATCTTGGTCAATA CCAAATTCGGAAGAGATACAATTTGATTTTCTTTGGAGAATTCATAAATACGTCCCTCCAAAAGGTATGATTTATATTCA CAATCGCTCTCATTACGAAGACGTAATCATGCCTAAAATACAAGGAACTCTTTCGGATAAAAGAATTGAAGAAAGAATGG AATCGATCCGTGACTTCGAGAAACACCTTTTCAGAGAAAAGGGAACCGTAATTTTGAAATTCTTTCTGCACATTTCCAAG GAGGAACAACTAAAAAGAATTCAAGAAAGAATTTCTGATCCGGATAAAAATTGGAAATATGATCCCTCTGACCAAACAAC TCAAGATCGTTGGGATGATTATCAATCCGCCTATGAAATGATCTTAAACGATAAAAATCAATTCAAGGAATGGTATATAA TTCCAGCAGATAAGAAATGGTTTCGAAACTATCAAGTTGTAAAAATCCTTTGTAAAGAACTGGAAAAAATTATCTCTTAA
Upstream 100 bases:
>100_bases AACTTTTGAAACTATCTTCACTTCCAATTTTTAAATCTGTTCGCAAATCAATTTTATCATTAGTAAACCTCTTTAAGAAA TGATTTCAAAGTAAATTTAA
Downstream 100 bases:
>100_bases ATATGAGATTGGAAACAAAACCGATCCTCTAAAAATATTACAACAGTTTAACGACCTATACTGTTTTAAATCACTAACCT ATTTCATTACGAAACTTAAA
Product: hypothetical protein
Products: NA
Alternate protein names: URF2 [H]
Number of amino acids: Translated: 239; Mature: 239
Protein sequence:
>239_residues MRLKEIDTLPPKDKLKEEVIQKTEEYIKNLSYLQEKLYALKKHSILIILQGVDTAGKDSTIKHVFAGINPQGCYVKSWSI PNSEEIQFDFLWRIHKYVPPKGMIYIHNRSHYEDVIMPKIQGTLSDKRIEERMESIRDFEKHLFREKGTVILKFFLHISK EEQLKRIQERISDPDKNWKYDPSDQTTQDRWDDYQSAYEMILNDKNQFKEWYIIPADKKWFRNYQVVKILCKELEKIIS
Sequences:
>Translated_239_residues MRLKEIDTLPPKDKLKEEVIQKTEEYIKNLSYLQEKLYALKKHSILIILQGVDTAGKDSTIKHVFAGINPQGCYVKSWSI PNSEEIQFDFLWRIHKYVPPKGMIYIHNRSHYEDVIMPKIQGTLSDKRIEERMESIRDFEKHLFREKGTVILKFFLHISK EEQLKRIQERISDPDKNWKYDPSDQTTQDRWDDYQSAYEMILNDKNQFKEWYIIPADKKWFRNYQVVKILCKELEKIIS >Mature_239_residues MRLKEIDTLPPKDKLKEEVIQKTEEYIKNLSYLQEKLYALKKHSILIILQGVDTAGKDSTIKHVFAGINPQGCYVKSWSI PNSEEIQFDFLWRIHKYVPPKGMIYIHNRSHYEDVIMPKIQGTLSDKRIEERMESIRDFEKHLFREKGTVILKFFLHISK EEQLKRIQERISDPDKNWKYDPSDQTTQDRWDDYQSAYEMILNDKNQFKEWYIIPADKKWFRNYQVVKILCKELEKIIS
Specific function: Unknown
COG id: COG2326
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011993 - InterPro: IPR022488 [H]
Pfam domain/function: PF03976 PPK2 [H]
EC number: NA
Molecular weight: Translated: 28789; Mature: 28789
Theoretical pI: Translated: 8.86; Mature: 8.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLKEIDTLPPKDKLKEEVIQKTEEYIKNLSYLQEKLYALKKHSILIILQGVDTAGKDST CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCHH IKHVFAGINPQGCYVKSWSIPNSEEIQFDFLWRIHKYVPPKGMIYIHNRSHYEDVIMPKI HHHHHHCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHH QGTLSDKRIEERMESIRDFEKHLFREKGTVILKFFLHISKEEQLKRIQERISDPDKNWKY HCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCC DPSDQTTQDRWDDYQSAYEMILNDKNQFKEWYIIPADKKWFRNYQVVKILCKELEKIIS CCCCCCHHHHHHHHHHHHHHHHCCCHHCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHC >Mature Secondary Structure MRLKEIDTLPPKDKLKEEVIQKTEEYIKNLSYLQEKLYALKKHSILIILQGVDTAGKDST CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCHH IKHVFAGINPQGCYVKSWSIPNSEEIQFDFLWRIHKYVPPKGMIYIHNRSHYEDVIMPKI HHHHHHCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHH QGTLSDKRIEERMESIRDFEKHLFREKGTVILKFFLHISKEEQLKRIQERISDPDKNWKY HCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCC DPSDQTTQDRWDDYQSAYEMILNDKNQFKEWYIIPADKKWFRNYQVVKILCKELEKIIS CCCCCCHHHHHHHHHHHHHHHHCCCHHCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8199775 [H]