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The map label for this gene is 45656274

Identifier: 45656274

GI number: 45656274

Start: 423893

End: 424612

Strand: Reverse

Name: 45656274

Synonym: LIC10374

Alternate gene names: NA

Gene position: 424612-423893 (Counterclockwise)

Preceding gene: 45656275

Following gene: 45656273

Centisome position: 9.93

GC content: 33.61

Gene sequence:

>720_bases
ATGCGCCTTAAAGAAATAGACACCCTCCCGCCAAAAGATAAACTCAAAGAAGAAGTGATTCAAAAAACGGAAGAATACAT
TAAGAATCTTTCTTATCTTCAAGAAAAGTTATATGCGCTAAAAAAACATTCGATTCTTATTATATTACAAGGTGTAGATA
CGGCCGGTAAAGATAGCACGATCAAACATGTTTTTGCCGGAATCAATCCTCAAGGTTGTTATGTTAAATCTTGGTCAATA
CCAAATTCGGAAGAGATACAATTTGATTTTCTTTGGAGAATTCATAAATACGTCCCTCCAAAAGGTATGATTTATATTCA
CAATCGCTCTCATTACGAAGACGTAATCATGCCTAAAATACAAGGAACTCTTTCGGATAAAAGAATTGAAGAAAGAATGG
AATCGATCCGTGACTTCGAGAAACACCTTTTCAGAGAAAAGGGAACCGTAATTTTGAAATTCTTTCTGCACATTTCCAAG
GAGGAACAACTAAAAAGAATTCAAGAAAGAATTTCTGATCCGGATAAAAATTGGAAATATGATCCCTCTGACCAAACAAC
TCAAGATCGTTGGGATGATTATCAATCCGCCTATGAAATGATCTTAAACGATAAAAATCAATTCAAGGAATGGTATATAA
TTCCAGCAGATAAGAAATGGTTTCGAAACTATCAAGTTGTAAAAATCCTTTGTAAAGAACTGGAAAAAATTATCTCTTAA

Upstream 100 bases:

>100_bases
AACTTTTGAAACTATCTTCACTTCCAATTTTTAAATCTGTTCGCAAATCAATTTTATCATTAGTAAACCTCTTTAAGAAA
TGATTTCAAAGTAAATTTAA

Downstream 100 bases:

>100_bases
ATATGAGATTGGAAACAAAACCGATCCTCTAAAAATATTACAACAGTTTAACGACCTATACTGTTTTAAATCACTAACCT
ATTTCATTACGAAACTTAAA

Product: hypothetical protein

Products: NA

Alternate protein names: URF2 [H]

Number of amino acids: Translated: 239; Mature: 239

Protein sequence:

>239_residues
MRLKEIDTLPPKDKLKEEVIQKTEEYIKNLSYLQEKLYALKKHSILIILQGVDTAGKDSTIKHVFAGINPQGCYVKSWSI
PNSEEIQFDFLWRIHKYVPPKGMIYIHNRSHYEDVIMPKIQGTLSDKRIEERMESIRDFEKHLFREKGTVILKFFLHISK
EEQLKRIQERISDPDKNWKYDPSDQTTQDRWDDYQSAYEMILNDKNQFKEWYIIPADKKWFRNYQVVKILCKELEKIIS

Sequences:

>Translated_239_residues
MRLKEIDTLPPKDKLKEEVIQKTEEYIKNLSYLQEKLYALKKHSILIILQGVDTAGKDSTIKHVFAGINPQGCYVKSWSI
PNSEEIQFDFLWRIHKYVPPKGMIYIHNRSHYEDVIMPKIQGTLSDKRIEERMESIRDFEKHLFREKGTVILKFFLHISK
EEQLKRIQERISDPDKNWKYDPSDQTTQDRWDDYQSAYEMILNDKNQFKEWYIIPADKKWFRNYQVVKILCKELEKIIS
>Mature_239_residues
MRLKEIDTLPPKDKLKEEVIQKTEEYIKNLSYLQEKLYALKKHSILIILQGVDTAGKDSTIKHVFAGINPQGCYVKSWSI
PNSEEIQFDFLWRIHKYVPPKGMIYIHNRSHYEDVIMPKIQGTLSDKRIEERMESIRDFEKHLFREKGTVILKFFLHISK
EEQLKRIQERISDPDKNWKYDPSDQTTQDRWDDYQSAYEMILNDKNQFKEWYIIPADKKWFRNYQVVKILCKELEKIIS

Specific function: Unknown

COG id: COG2326

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011993
- InterPro:   IPR022488 [H]

Pfam domain/function: PF03976 PPK2 [H]

EC number: NA

Molecular weight: Translated: 28789; Mature: 28789

Theoretical pI: Translated: 8.86; Mature: 8.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLKEIDTLPPKDKLKEEVIQKTEEYIKNLSYLQEKLYALKKHSILIILQGVDTAGKDST
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCHH
IKHVFAGINPQGCYVKSWSIPNSEEIQFDFLWRIHKYVPPKGMIYIHNRSHYEDVIMPKI
HHHHHHCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHH
QGTLSDKRIEERMESIRDFEKHLFREKGTVILKFFLHISKEEQLKRIQERISDPDKNWKY
HCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCC
DPSDQTTQDRWDDYQSAYEMILNDKNQFKEWYIIPADKKWFRNYQVVKILCKELEKIIS
CCCCCCHHHHHHHHHHHHHHHHCCCHHCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHC
>Mature Secondary Structure
MRLKEIDTLPPKDKLKEEVIQKTEEYIKNLSYLQEKLYALKKHSILIILQGVDTAGKDST
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCHH
IKHVFAGINPQGCYVKSWSIPNSEEIQFDFLWRIHKYVPPKGMIYIHNRSHYEDVIMPKI
HHHHHHCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHH
QGTLSDKRIEERMESIRDFEKHLFREKGTVILKFFLHISKEEQLKRIQERISDPDKNWKY
HCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCC
DPSDQTTQDRWDDYQSAYEMILNDKNQFKEWYIIPADKKWFRNYQVVKILCKELEKIIS
CCCCCCHHHHHHHHHHHHHHHHCCCHHCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8199775 [H]