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The map label for this gene is 45656273

Identifier: 45656273

GI number: 45656273

Start: 421630

End: 423159

Strand: Reverse

Name: 45656273

Synonym: LIC10373

Alternate gene names: NA

Gene position: 423159-421630 (Counterclockwise)

Preceding gene: 45656274

Following gene: 45656272

Centisome position: 9.89

GC content: 34.97

Gene sequence:

>1530_bases
TTGATTCGTTTGATAATTCTAATTTTTATAATATTCTTTCAGGCTTGTTCGCCCACTTCTGGCAAAGAGATAAAAAACTT
TTTAATTCCTTTGGTCCAAGGAAACTCAAGTTTTCCTCAAAATTCATTTGCTTCAAATCCAGAGGAAAGACCGATCGATC
TTGATCAAAATCCGAATATCTTAGAAGAAAACGCAGTTATCCCCGAAGAAAGACCATTGGTTTTCGGCAGAAACCCACTT
AACTTGGAATGGGCTACGCTACTTGAAATCCCCTCCAATAATACGATCAAGACGCCAAACATTGCAATTGATGGAAATGG
CTTCATTTATGTGGCTTCTGATTCCAATGCAAATCTAATTGGAGATAAATTAAAAATCGGAACTAGAGATGTAATCTTAA
AAAAATATGATTCTCATCAAAATGAACTTTGGATGAAACGAATTGGCTCTCGAAATACTCATTTAACAATTACCGGTTTA
GCAGCAGATATAAACGGAAACGCATATGTAACTGGTTATACCAATGGTCCACTTGAAAAGGCGCTTATATCTGATCAGGA
TATGTTCGTAATTAAGTTCAATACAGATGGAACTATCGCTTGGAAAAAACAGGCTGCTCCCCAAAGAGCAAAAGGAGTTT
ATAATACTTATAAAGTCTTTACGGAAGGAATTACAGTAGATATATTTGGAAATTCTTATATAGTTGGAACCTCTAATGGA
CCATTCGGAGATAATGCAGACGGTAACCTCGGCGGTGGGTATATTATCAAATTTGATACTAATGGAAATCAGATTTGGGT
AAAACAAATTTCTATAGTTGATGCCAGTATCTACCCAAAGAATGTCGCGGTGGATGAAGATTTAAGGCAAATTTATGTAG
CCGGAACATCAAAAAATGCAAACTTTAGAACCAATAAAACTTTTAACTATTCCAATGGTGCAGGAGGTGATGACCTTTTT
ATTCTTAGATTTGATGAAAATGGAAATCAAGAATTTTTTACTCAAACGAATCTATATAGAGATAGTATAACACCCAATTC
TCTGACTGTAGATTCATTCGGAAATGTTTTAGTTGGAGGATCTAGCATTATAGATCTTGAATTTGGCACATACGAAAGGA
CATATTTGCGCGGAGTTTTAATAAAATATGATCTCAATGGAGACGAAAGATGGATCAGACAATTGGGTCCTCGGGAAGAC
GCTCAATTTATTCAAAGATCAACTACAATCACTGGAATTGCAACCGATGAGAATGGAAATATTTTTACTACGGGTTCAAC
TAATGGAAATATCATCAATGAACATAGCGAACCACTAGGAAACCAAGATATCTTTTTGACAAAATACAATTACCTAGGAC
AAATCGAATGGATACGTCAAATCGGAAGACTGGGAGAAACTTTATATCCTGGTAAGATTGGGATCGACTTTAATAGAAAT
TTATATACTACCGGACTTACAGACAACAATGGAAAAGAATATCAAGTTATAGGTGGAGACTTAGATTTATTTCTCATAAA
GTTTAGATAA

Upstream 100 bases:

>100_bases
TAAAATAGAAACAAATGGAGAATTAATTTTTCAACAATTCTAATCTCAAATAAATAAAAACATACAAATATTGAGATAAT
TCTTAGGTGGAGAGAGAACT

Downstream 100 bases:

>100_bases
TTCAACTTCACCTAATTTTGCACTTTATAATTTTTTAAATTATGTTTTTCGGAGTTGTTTTAAAAAGGATTTTATTGAAC
GTGATAAAAGATATTTCTAC

Product: putative lipoprotein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 509; Mature: 509

Protein sequence:

>509_residues
MIRLIILIFIIFFQACSPTSGKEIKNFLIPLVQGNSSFPQNSFASNPEERPIDLDQNPNILEENAVIPEERPLVFGRNPL
NLEWATLLEIPSNNTIKTPNIAIDGNGFIYVASDSNANLIGDKLKIGTRDVILKKYDSHQNELWMKRIGSRNTHLTITGL
AADINGNAYVTGYTNGPLEKALISDQDMFVIKFNTDGTIAWKKQAAPQRAKGVYNTYKVFTEGITVDIFGNSYIVGTSNG
PFGDNADGNLGGGYIIKFDTNGNQIWVKQISIVDASIYPKNVAVDEDLRQIYVAGTSKNANFRTNKTFNYSNGAGGDDLF
ILRFDENGNQEFFTQTNLYRDSITPNSLTVDSFGNVLVGGSSIIDLEFGTYERTYLRGVLIKYDLNGDERWIRQLGPRED
AQFIQRSTTITGIATDENGNIFTTGSTNGNIINEHSEPLGNQDIFLTKYNYLGQIEWIRQIGRLGETLYPGKIGIDFNRN
LYTTGLTDNNGKEYQVIGGDLDLFLIKFR

Sequences:

>Translated_509_residues
MIRLIILIFIIFFQACSPTSGKEIKNFLIPLVQGNSSFPQNSFASNPEERPIDLDQNPNILEENAVIPEERPLVFGRNPL
NLEWATLLEIPSNNTIKTPNIAIDGNGFIYVASDSNANLIGDKLKIGTRDVILKKYDSHQNELWMKRIGSRNTHLTITGL
AADINGNAYVTGYTNGPLEKALISDQDMFVIKFNTDGTIAWKKQAAPQRAKGVYNTYKVFTEGITVDIFGNSYIVGTSNG
PFGDNADGNLGGGYIIKFDTNGNQIWVKQISIVDASIYPKNVAVDEDLRQIYVAGTSKNANFRTNKTFNYSNGAGGDDLF
ILRFDENGNQEFFTQTNLYRDSITPNSLTVDSFGNVLVGGSSIIDLEFGTYERTYLRGVLIKYDLNGDERWIRQLGPRED
AQFIQRSTTITGIATDENGNIFTTGSTNGNIINEHSEPLGNQDIFLTKYNYLGQIEWIRQIGRLGETLYPGKIGIDFNRN
LYTTGLTDNNGKEYQVIGGDLDLFLIKFR
>Mature_509_residues
MIRLIILIFIIFFQACSPTSGKEIKNFLIPLVQGNSSFPQNSFASNPEERPIDLDQNPNILEENAVIPEERPLVFGRNPL
NLEWATLLEIPSNNTIKTPNIAIDGNGFIYVASDSNANLIGDKLKIGTRDVILKKYDSHQNELWMKRIGSRNTHLTITGL
AADINGNAYVTGYTNGPLEKALISDQDMFVIKFNTDGTIAWKKQAAPQRAKGVYNTYKVFTEGITVDIFGNSYIVGTSNG
PFGDNADGNLGGGYIIKFDTNGNQIWVKQISIVDASIYPKNVAVDEDLRQIYVAGTSKNANFRTNKTFNYSNGAGGDDLF
ILRFDENGNQEFFTQTNLYRDSITPNSLTVDSFGNVLVGGSSIIDLEFGTYERTYLRGVLIKYDLNGDERWIRQLGPRED
AQFIQRSTTITGIATDENGNIFTTGSTNGNIINEHSEPLGNQDIFLTKYNYLGQIEWIRQIGRLGETLYPGKIGIDFNRN
LYTTGLTDNNGKEYQVIGGDLDLFLIKFR

Specific function: Unknown

COG id: COG3291

COG function: function code R; FOG: PKD repeat

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 56732; Mature: 56732

Theoretical pI: Translated: 4.73; Mature: 4.73

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
0.8 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIRLIILIFIIFFQACSPTSGKEIKNFLIPLVQGNSSFPQNSFASNPEERPIDLDQNPNI
CHHHHHHHHHHHHHHCCCCCCHHHHHHEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCE
LEENAVIPEERPLVFGRNPLNLEWATLLEIPSNNTIKTPNIAIDGNGFIYVASDSNANLI
ECCCCCCCCCCCEEECCCCCCEEEEEEEECCCCCCEECCEEEECCCCEEEEEECCCCCEE
GDKLKIGTRDVILKKYDSHQNELWMKRIGSRNTHLTITGLAADINGNAYVTGYTNGPLEK
CCEEECCCHHEEEECCCCCCHHHHHHHHCCCCCEEEEEEEEEECCCCEEEEECCCCCHHH
ALISDQDMFVIKFNTDGTIAWKKQAAPQRAKGVYNTYKVFTEGITVDIFGNSYIVGTSNG
HHCCCCCEEEEEECCCCEEEEECCCCCHHHHCCHHEEEEEECCEEEEEECCEEEEECCCC
PFGDNADGNLGGGYIIKFDTNGNQIWVKQISIVDASIYPKNVAVDEDLRQIYVAGTSKNA
CCCCCCCCCCCCCEEEEEECCCCEEEEEEEEEEEEECCCCCCCCCCCCEEEEEEECCCCC
NFRTNKTFNYSNGAGGDDLFILRFDENGNQEFFTQTNLYRDSITPNSLTVDSFGNVLVGG
CEEECCEEECCCCCCCCCEEEEEECCCCCEEEEEECCEEECCCCCCCEECCCCCCEEECC
SSIIDLEFGTYERTYLRGVLIKYDLNGDERWIRQLGPREDAQFIQRSTTITGIATDENGN
CEEEEEECCCCCCEEEEEEEEEEECCCHHHHHHHCCCCCHHHHHHHCCEEEEEEECCCCC
IFTTGSTNGNIINEHSEPLGNQDIFLTKYNYLGQIEWIRQIGRLGETLYPGKIGIDFNRN
EEEECCCCCCEECCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHCCEECCCEEEEEECCC
LYTTGLTDNNGKEYQVIGGDLDLFLIKFR
EEEECCCCCCCCEEEEECCCEEEEEEEEC
>Mature Secondary Structure
MIRLIILIFIIFFQACSPTSGKEIKNFLIPLVQGNSSFPQNSFASNPEERPIDLDQNPNI
CHHHHHHHHHHHHHHCCCCCCHHHHHHEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCE
LEENAVIPEERPLVFGRNPLNLEWATLLEIPSNNTIKTPNIAIDGNGFIYVASDSNANLI
ECCCCCCCCCCCEEECCCCCCEEEEEEEECCCCCCEECCEEEECCCCEEEEEECCCCCEE
GDKLKIGTRDVILKKYDSHQNELWMKRIGSRNTHLTITGLAADINGNAYVTGYTNGPLEK
CCEEECCCHHEEEECCCCCCHHHHHHHHCCCCCEEEEEEEEEECCCCEEEEECCCCCHHH
ALISDQDMFVIKFNTDGTIAWKKQAAPQRAKGVYNTYKVFTEGITVDIFGNSYIVGTSNG
HHCCCCCEEEEEECCCCEEEEECCCCCHHHHCCHHEEEEEECCEEEEEECCEEEEECCCC
PFGDNADGNLGGGYIIKFDTNGNQIWVKQISIVDASIYPKNVAVDEDLRQIYVAGTSKNA
CCCCCCCCCCCCCEEEEEECCCCEEEEEEEEEEEEECCCCCCCCCCCCEEEEEEECCCCC
NFRTNKTFNYSNGAGGDDLFILRFDENGNQEFFTQTNLYRDSITPNSLTVDSFGNVLVGG
CEEECCEEECCCCCCCCCEEEEEECCCCCEEEEEECCEEECCCCCCCEECCCCCCEEECC
SSIIDLEFGTYERTYLRGVLIKYDLNGDERWIRQLGPREDAQFIQRSTTITGIATDENGN
CEEEEEECCCCCCEEEEEEEEEEECCCHHHHHHHCCCCCHHHHHHHCCEEEEEEECCCCC
IFTTGSTNGNIINEHSEPLGNQDIFLTKYNYLGQIEWIRQIGRLGETLYPGKIGIDFNRN
EEEECCCCCCEECCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHCCEECCCEEEEEECCC
LYTTGLTDNNGKEYQVIGGDLDLFLIKFR
EEEECCCCCCCCEEEEECCCEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA