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The map label for this gene is 45656156

Identifier: 45656156

GI number: 45656156

Start: 285742

End: 288057

Strand: Reverse

Name: 45656156

Synonym: LIC10251

Alternate gene names: NA

Gene position: 288057-285742 (Counterclockwise)

Preceding gene: 45656157

Following gene: 45656152

Centisome position: 6.73

GC content: 32.51

Gene sequence:

>2316_bases
ATGATTTCTGCGATCCAACTTCTCAACTTCGGAAAATTTAAAGGTAAAGAATTTGAACTTTCGAACTCTGCCACCGTTTT
TTTAGGTAAAAATGAATCCGGTAAAACCACGATTTTCGACGCTCTTAGACTCGCGATCGGAAGTAGATTTCTTACCGCAA
GCCAAGAACCTAAAAAAAGTATTCTTTCTCGTTATGGTGAAACCTGTTTAGAAGGTTATAATATTCTGGGAAAGGTTCCA
GATCTTTCCAAAGATTCCGCTCCTCAATTTGTTCACTGTGTTTCTCTCAGAGAAGGAGAATTGGAATTTGCATTTAACAA
CGATAAGTTGATCAAGCCAGATTTTCTTCGGAGTAAACTTTTAAACAACGGAGTCAATTTGGAAGGTATTTCTAGCTCCT
TTAAAAAAATTCATTCTCCAAAAACAGGCAGCAAGGACGCGGATCATTTCAACGATCTTAAAGAGGAAATTGTAAATCTC
CAAACCAAAAGATCCAAATTGATTTTAGAAATCGAAAATCTACATTCCAGAAATAAAAACAACTCCGAAAAAGAGGAAAA
ACATTTCAAAGATCAAAACAAAGAAATAGAAATTAAAAACAAACTTGCACAGATCGAAAAAAATTCTGCCCTGGATTTAA
AGATTCAAAAGAAAATTCAAATTTTAGAATGTATTTCTGAAATTCAAAGATTAAAATCCATCGAGGAATCTATCAGAAAA
AATCTTCTTTATTCCAAAGACGAATCTGCTGGTTTTGATTCTTTTCAAAAAGAAATAGAAAAATCAAAGAATAATGCCTC
CTCTTTTGAGCTATTACTTAAAGATAAAGAAAACACGATTAATTCCAAAAAAAAAGAATTAAACGATTATAAAACCCAAC
TTTCCATCCTCCAAAAATTGAAACAAAAAGCAGAAGAATGGTTTGATAAAATAGATACAATTCTTAAAGAAGATGGCTTT
TCCGAAGAAATAAAAACGACTCATTCCAATCCTTTACATCAACTTTTAGGACTTATTCTATCCGGACTTGGTTTTTGTGG
AGTGTTAGGCTCCTTCGCCTTGTTTCTTTTTTCTAAATTATCTCTTACTATGTTTTTAAGTGGAGTGTTCCTTTCTGGAG
GCCTAATCATTTTGGGCCTTTGGCTATTCTCTCATAAAAAAGAATCCGTCAATTTCAGATATAGTTCCGAAAAGGAAAAA
AATTTTGTTCTTAAAATTTCCGGACAATGGAATTTAACATTTCCAGAATATTCCATTCCCCTTATGGAAAAAATAGAAAA
TCTTAGACAATTTTTTTCCAAACAAATTCAAAACTTTGATCTTAAAACGGCTCAGGTAGAATCAATTGAAAAGGAAATTC
GATTTTTGACCGAAGAACTGGACCCGATTCGTTCCAACTTAAAATTAGAAGCCGAAAAAATTTCAAATCTAGAATCCAAA
AGGAATTCCTGGTTAAATGATAGAAGATCAGCTACGATCCAAGATTATCATAAACAAGTCGCTGAATTTCAGACCCAATC
CAAATTTTTCTCCGAAGGTTTGAAAAAAATTCTCACTGAACATTCTTCTCATAGCCTAGAAGATCTAGAAATCAAACAAA
AAACTTTGATCGCAACGATGGAAGACGTTCCGAACGAATTTCCAAACGATCCAGAAAGACAATTTAGAGATTCAAAAAAA
AGAGAACTTGAAAAAGAACTTCAATCCCTAGACAACGAATTAAAAAAATTGAATACTGCTATCCAAGTAGAAGATGCTAG
AATCCAGGATCTACTTCCAGAAAAAGAAAAAGATCTTAAAGATACTATCCTATCACTTTTTGAAAAAGAATTAGAATTTT
CTAAAATAGAATCTAAGCGTAAATCTGCTAAAATTGCTCAGGAACTTTTTGAAGAAATTTCTAAAGACCAATCTACACAA
TTCGTTTTGATCGCCTCCGAAATCGGCAAAGAAATCGACCTTTTACTTCCTAAAAGATCTGTCATTCTGGAAGCCATCGA
TAAAAAAGATTCAATTAAAATGCAAGATGAAGCGGGCACGTTTCGTTCTATTGATCATCTTTCTGGCGGAACCCTCGCTA
CTTTCTATCTAATTTTTAAATTGTTTTTGGCTCGCAAAACAGTTCCTAAAAAAGGAATTCTACTTTTAGACGAACCTTTT
GTACATCTAGATCGTGGAAGAATTGAATCCGCTTTTTTTTATCTTAAAAAATTCCAAGAAGAAACGGAATATCAAATCTG
TTTTTTTACAAAACAAGAAGAAATTGCAGATACGGTTTTACGTTTTTTTAAAGATTCAAAAAAGGTTTCTTTATAA

Upstream 100 bases:

>100_bases
GATAAAAAATCAAATTGGAACGGCCAAAATTCCCCCGATTGGAACGAAGTTTTAGTCTTAGGGTTAGAACAAATCGAAGA
ATTTTCTGGAAAAAAATGAT

Downstream 100 bases:

>100_bases
TGGCTGCTCAGAATCATACAATAAGTGCCTAAAGTTCCACGGCAAACCTATCTAAAAATTTATTATATTTCCAGAAACGA
AAACTAATCAAAAATTATTT

Product: Rad50-like protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 771; Mature: 771

Protein sequence:

>771_residues
MISAIQLLNFGKFKGKEFELSNSATVFLGKNESGKTTIFDALRLAIGSRFLTASQEPKKSILSRYGETCLEGYNILGKVP
DLSKDSAPQFVHCVSLREGELEFAFNNDKLIKPDFLRSKLLNNGVNLEGISSSFKKIHSPKTGSKDADHFNDLKEEIVNL
QTKRSKLILEIENLHSRNKNNSEKEEKHFKDQNKEIEIKNKLAQIEKNSALDLKIQKKIQILECISEIQRLKSIEESIRK
NLLYSKDESAGFDSFQKEIEKSKNNASSFELLLKDKENTINSKKKELNDYKTQLSILQKLKQKAEEWFDKIDTILKEDGF
SEEIKTTHSNPLHQLLGLILSGLGFCGVLGSFALFLFSKLSLTMFLSGVFLSGGLIILGLWLFSHKKESVNFRYSSEKEK
NFVLKISGQWNLTFPEYSIPLMEKIENLRQFFSKQIQNFDLKTAQVESIEKEIRFLTEELDPIRSNLKLEAEKISNLESK
RNSWLNDRRSATIQDYHKQVAEFQTQSKFFSEGLKKILTEHSSHSLEDLEIKQKTLIATMEDVPNEFPNDPERQFRDSKK
RELEKELQSLDNELKKLNTAIQVEDARIQDLLPEKEKDLKDTILSLFEKELEFSKIESKRKSAKIAQELFEEISKDQSTQ
FVLIASEIGKEIDLLLPKRSVILEAIDKKDSIKMQDEAGTFRSIDHLSGGTLATFYLIFKLFLARKTVPKKGILLLDEPF
VHLDRGRIESAFFYLKKFQEETEYQICFFTKQEEIADTVLRFFKDSKKVSL

Sequences:

>Translated_771_residues
MISAIQLLNFGKFKGKEFELSNSATVFLGKNESGKTTIFDALRLAIGSRFLTASQEPKKSILSRYGETCLEGYNILGKVP
DLSKDSAPQFVHCVSLREGELEFAFNNDKLIKPDFLRSKLLNNGVNLEGISSSFKKIHSPKTGSKDADHFNDLKEEIVNL
QTKRSKLILEIENLHSRNKNNSEKEEKHFKDQNKEIEIKNKLAQIEKNSALDLKIQKKIQILECISEIQRLKSIEESIRK
NLLYSKDESAGFDSFQKEIEKSKNNASSFELLLKDKENTINSKKKELNDYKTQLSILQKLKQKAEEWFDKIDTILKEDGF
SEEIKTTHSNPLHQLLGLILSGLGFCGVLGSFALFLFSKLSLTMFLSGVFLSGGLIILGLWLFSHKKESVNFRYSSEKEK
NFVLKISGQWNLTFPEYSIPLMEKIENLRQFFSKQIQNFDLKTAQVESIEKEIRFLTEELDPIRSNLKLEAEKISNLESK
RNSWLNDRRSATIQDYHKQVAEFQTQSKFFSEGLKKILTEHSSHSLEDLEIKQKTLIATMEDVPNEFPNDPERQFRDSKK
RELEKELQSLDNELKKLNTAIQVEDARIQDLLPEKEKDLKDTILSLFEKELEFSKIESKRKSAKIAQELFEEISKDQSTQ
FVLIASEIGKEIDLLLPKRSVILEAIDKKDSIKMQDEAGTFRSIDHLSGGTLATFYLIFKLFLARKTVPKKGILLLDEPF
VHLDRGRIESAFFYLKKFQEETEYQICFFTKQEEIADTVLRFFKDSKKVSL
>Mature_771_residues
MISAIQLLNFGKFKGKEFELSNSATVFLGKNESGKTTIFDALRLAIGSRFLTASQEPKKSILSRYGETCLEGYNILGKVP
DLSKDSAPQFVHCVSLREGELEFAFNNDKLIKPDFLRSKLLNNGVNLEGISSSFKKIHSPKTGSKDADHFNDLKEEIVNL
QTKRSKLILEIENLHSRNKNNSEKEEKHFKDQNKEIEIKNKLAQIEKNSALDLKIQKKIQILECISEIQRLKSIEESIRK
NLLYSKDESAGFDSFQKEIEKSKNNASSFELLLKDKENTINSKKKELNDYKTQLSILQKLKQKAEEWFDKIDTILKEDGF
SEEIKTTHSNPLHQLLGLILSGLGFCGVLGSFALFLFSKLSLTMFLSGVFLSGGLIILGLWLFSHKKESVNFRYSSEKEK
NFVLKISGQWNLTFPEYSIPLMEKIENLRQFFSKQIQNFDLKTAQVESIEKEIRFLTEELDPIRSNLKLEAEKISNLESK
RNSWLNDRRSATIQDYHKQVAEFQTQSKFFSEGLKKILTEHSSHSLEDLEIKQKTLIATMEDVPNEFPNDPERQFRDSKK
RELEKELQSLDNELKKLNTAIQVEDARIQDLLPEKEKDLKDTILSLFEKELEFSKIESKRKSAKIAQELFEEISKDQSTQ
FVLIASEIGKEIDLLLPKRSVILEAIDKKDSIKMQDEAGTFRSIDHLSGGTLATFYLIFKLFLARKTVPKKGILLLDEPF
VHLDRGRIESAFFYLKKFQEETEYQICFFTKQEEIADTVLRFFKDSKKVSL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 88918; Mature: 88918

Theoretical pI: Translated: 7.94; Mature: 7.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MISAIQLLNFGKFKGKEFELSNSATVFLGKNESGKTTIFDALRLAIGSRFLTASQEPKKS
CCCHHHHHHCCCCCCCEEEECCCEEEEEECCCCCCHHHHHHHHHHHCCHHHCCCCCHHHH
ILSRYGETCLEGYNILGKVPDLSKDSAPQFVHCVSLREGELEFAFNNDKLIKPDFLRSKL
HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEHHHCCCCCEEEEECCCCCCCHHHHHHHH
LNNGVNLEGISSSFKKIHSPKTGSKDADHFNDLKEEIVNLQTKRSKLILEIENLHSRNKN
HHCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHEEEHHHHHCCCCC
NSEKEEKHFKDQNKEIEIKNKLAQIEKNSALDLKIQKKIQILECISEIQRLKSIEESIRK
CCHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
NLLYSKDESAGFDSFQKEIEKSKNNASSFELLLKDKENTINSKKKELNDYKTQLSILQKL
HHCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHEECCHHHHHHHHHHHHHHHHHHHHHHHH
KQKAEEWFDKIDTILKEDGFSEEIKTTHSNPLHQLLGLILSGLGFCGVLGSFALFLFSKL
HHHHHHHHHHHHHHHHCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SLTMFLSGVFLSGGLIILGLWLFSHKKESVNFRYSSEKEKNFVLKISGQWNLTFPEYSIP
HHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCEEECCCCCCCEEEEEECCEEECCCCCCCH
LMEKIENLRQFFSKQIQNFDLKTAQVESIEKEIRFLTEELDPIRSNLKLEAEKISNLESK
HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCEECHHHHHHHHHH
RNSWLNDRRSATIQDYHKQVAEFQTQSKFFSEGLKKILTEHSSHSLEDLEIKQKTLIATM
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH
EDVPNEFPNDPERQFRDSKKRELEKELQSLDNELKKLNTAIQVEDARIQDLLPEKEKDLK
HHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECHHHHHHHCCCHHHHHH
DTILSLFEKELEFSKIESKRKSAKIAQELFEEISKDQSTQFVLIASEIGKEIDLLLPKRS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHHCCHHHHHCCHHH
VILEAIDKKDSIKMQDEAGTFRSIDHLSGGTLATFYLIFKLFLARKTVPKKGILLLDEPF
HHHHHHCCCCCCEECCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCEEEECCCC
VHLDRGRIESAFFYLKKFQEETEYQICFFTKQEEIADTVLRFFKDSKKVSL
HHHCCCHHHHHHHHHHHHHHCCCEEEEEEECHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MISAIQLLNFGKFKGKEFELSNSATVFLGKNESGKTTIFDALRLAIGSRFLTASQEPKKS
CCCHHHHHHCCCCCCCEEEECCCEEEEEECCCCCCHHHHHHHHHHHCCHHHCCCCCHHHH
ILSRYGETCLEGYNILGKVPDLSKDSAPQFVHCVSLREGELEFAFNNDKLIKPDFLRSKL
HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEHHHCCCCCEEEEECCCCCCCHHHHHHHH
LNNGVNLEGISSSFKKIHSPKTGSKDADHFNDLKEEIVNLQTKRSKLILEIENLHSRNKN
HHCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHEEEHHHHHCCCCC
NSEKEEKHFKDQNKEIEIKNKLAQIEKNSALDLKIQKKIQILECISEIQRLKSIEESIRK
CCHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
NLLYSKDESAGFDSFQKEIEKSKNNASSFELLLKDKENTINSKKKELNDYKTQLSILQKL
HHCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHEECCHHHHHHHHHHHHHHHHHHHHHHHH
KQKAEEWFDKIDTILKEDGFSEEIKTTHSNPLHQLLGLILSGLGFCGVLGSFALFLFSKL
HHHHHHHHHHHHHHHHCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SLTMFLSGVFLSGGLIILGLWLFSHKKESVNFRYSSEKEKNFVLKISGQWNLTFPEYSIP
HHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCEEECCCCCCCEEEEEECCEEECCCCCCCH
LMEKIENLRQFFSKQIQNFDLKTAQVESIEKEIRFLTEELDPIRSNLKLEAEKISNLESK
HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCEECHHHHHHHHHH
RNSWLNDRRSATIQDYHKQVAEFQTQSKFFSEGLKKILTEHSSHSLEDLEIKQKTLIATM
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH
EDVPNEFPNDPERQFRDSKKRELEKELQSLDNELKKLNTAIQVEDARIQDLLPEKEKDLK
HHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECHHHHHHHCCCHHHHHH
DTILSLFEKELEFSKIESKRKSAKIAQELFEEISKDQSTQFVLIASEIGKEIDLLLPKRS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHHCCHHHHHCCHHH
VILEAIDKKDSIKMQDEAGTFRSIDHLSGGTLATFYLIFKLFLARKTVPKKGILLLDEPF
HHHHHHCCCCCCEECCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCEEEECCCC
VHLDRGRIESAFFYLKKFQEETEYQICFFTKQEEIADTVLRFFKDSKKVSL
HHHCCCHHHHHHHHHHHHHHCCCEEEEEEECHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA