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The map label for this gene is 45656157

Identifier: 45656157

GI number: 45656157

Start: 288059

End: 289144

Strand: Reverse

Name: 45656157

Synonym: LIC10252

Alternate gene names: NA

Gene position: 289144-288059 (Counterclockwise)

Preceding gene: 45656159

Following gene: 45656156

Centisome position: 6.76

GC content: 36.83

Gene sequence:

>1086_bases
ATGATCCGATTCTTACATACAGCAGACCTACATCTAAGTCTAAAAGAGAAAGTTTATTCTCTTTCCGTTTTAAAAGAAAT
TGTTTCCACGGCAAAAACTGAAAAATGCACTCATATTCTTTTTTGTGGTGACCTTTTCGATCGTAACTCTGACATCGCTT
CTCTCAAAGAAGACGTAAAAGAAATCCTAACTTCTTTTTCTGGTAAAATTCTCTTTATCCCAGGCAACCACGAAGAGTTA
GGAATTTCAGAAGGTTCCTATCCAATTTCTGCAGATCTTTCCCCCATATCTTATCCCCAAAAAAATGATCGTTTTAAACT
TTGGTTCGAAGAAATAGACGGCGTAGACGCCGAATTTTTCGGTTTTCCGTTTCGCAGAAATTTAGATTATTCGAATATTC
AATTTAACGAAAAGAAAACTCTCTATCGTATCGCTCTTTTACACGGTACAGATACAAAATTGGTGGAATACTTGGGGCCT
TCTCCCGAAGACGCGGATTCTATTTTAGATTCAAAACCCTTTTTAGACGCCAAGTTCGATTACCTGGCACTCGGCCATAT
CCATTCAGAACGCTCTGAAAAAATCGGCTCTCTTTTGATTGCGTATCCTGGTTCTCCTAGAATTGTTTCTTCTGGCGAAT
TCGGTCCTCGTTCCGTCAACATTGTTACCCTCGGTAAAAATGGAACTCCAGTCCTTCAAAAAAAAATCATTTCTTCTGCG
GGTGAATTTAAAGAATTTTCTCTTTCTGCAAATCTCGCAGGCCAGATTCCAGAGCTTTCTAAAATACCTGCTTTGATTTC
CGAATTGGATTTTGTTCGTATTAAAATTTCTGGAATCGTAGAAGACGAACATATTGTTTCAGAAACTTTAGACAATTTCA
GTAAATCTCTCATTTGTAGAAAATTAGAAATCAAAACAAATGATCTCAAAACCTCTTCTGCGCTAATCGACAACCCAATC
GCAAAAGTATTTTATGATAAACTAATGGATAAAAAATCAAATTGGAACGGCCAAAATTCCCCCGATTGGAACGAAGTTTT
AGTCTTAGGGTTAGAACAAATCGAAGAATTTTCTGGAAAAAAATGA

Upstream 100 bases:

>100_bases
TTTTTCGGACGGCAAGCCCCCAAAAAAATCTTCAAAGATATTTATAGACTCTAAATTATGTCCGGGGGAACGGATATACT
CCGAAGGCAGAAACTAAATC

Downstream 100 bases:

>100_bases
TATGATTTCTGCGATCCAACTTCTCAACTTCGGAAAATTTAAAGGTAAAGAATTTGAACTTTCGAACTCTGCCACCGTTT
TTTTAGGTAAAAATGAATCC

Product: exonuclease

Products: NA

Alternate protein names: Metallophosphoesterase; Ser/Thr Protein Phosphatase Family Protein; Nuclease SbcCD Subunit D; DNA Repair Exonuclease

Number of amino acids: Translated: 361; Mature: 361

Protein sequence:

>361_residues
MIRFLHTADLHLSLKEKVYSLSVLKEIVSTAKTEKCTHILFCGDLFDRNSDIASLKEDVKEILTSFSGKILFIPGNHEEL
GISEGSYPISADLSPISYPQKNDRFKLWFEEIDGVDAEFFGFPFRRNLDYSNIQFNEKKTLYRIALLHGTDTKLVEYLGP
SPEDADSILDSKPFLDAKFDYLALGHIHSERSEKIGSLLIAYPGSPRIVSSGEFGPRSVNIVTLGKNGTPVLQKKIISSA
GEFKEFSLSANLAGQIPELSKIPALISELDFVRIKISGIVEDEHIVSETLDNFSKSLICRKLEIKTNDLKTSSALIDNPI
AKVFYDKLMDKKSNWNGQNSPDWNEVLVLGLEQIEEFSGKK

Sequences:

>Translated_361_residues
MIRFLHTADLHLSLKEKVYSLSVLKEIVSTAKTEKCTHILFCGDLFDRNSDIASLKEDVKEILTSFSGKILFIPGNHEEL
GISEGSYPISADLSPISYPQKNDRFKLWFEEIDGVDAEFFGFPFRRNLDYSNIQFNEKKTLYRIALLHGTDTKLVEYLGP
SPEDADSILDSKPFLDAKFDYLALGHIHSERSEKIGSLLIAYPGSPRIVSSGEFGPRSVNIVTLGKNGTPVLQKKIISSA
GEFKEFSLSANLAGQIPELSKIPALISELDFVRIKISGIVEDEHIVSETLDNFSKSLICRKLEIKTNDLKTSSALIDNPI
AKVFYDKLMDKKSNWNGQNSPDWNEVLVLGLEQIEEFSGKK
>Mature_361_residues
MIRFLHTADLHLSLKEKVYSLSVLKEIVSTAKTEKCTHILFCGDLFDRNSDIASLKEDVKEILTSFSGKILFIPGNHEEL
GISEGSYPISADLSPISYPQKNDRFKLWFEEIDGVDAEFFGFPFRRNLDYSNIQFNEKKTLYRIALLHGTDTKLVEYLGP
SPEDADSILDSKPFLDAKFDYLALGHIHSERSEKIGSLLIAYPGSPRIVSSGEFGPRSVNIVTLGKNGTPVLQKKIISSA
GEFKEFSLSANLAGQIPELSKIPALISELDFVRIKISGIVEDEHIVSETLDNFSKSLICRKLEIKTNDLKTSSALIDNPI
AKVFYDKLMDKKSNWNGQNSPDWNEVLVLGLEQIEEFSGKK

Specific function: Unknown

COG id: COG0420

COG function: function code L; DNA repair exonuclease

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40456; Mature: 40456

Theoretical pI: Translated: 5.33; Mature: 5.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIRFLHTADLHLSLKEKVYSLSVLKEIVSTAKTEKCTHILFCGDLFDRNSDIASLKEDVK
CEEEEEECCEEEEHHHHHHHHHHHHHHHHHHHHCCCEEEEEECHHHCCCCCHHHHHHHHH
EILTSFSGKILFIPGNHEELGISEGSYPISADLSPISYPQKNDRFKLWFEEIDGVDAEFF
HHHHHHCCEEEEEECCCCEECCCCCCCCEECCCCCCCCCCCCCCEEEEHHHHCCCCHHHH
GFPFRRNLDYSNIQFNEKKTLYRIALLHGTDTKLVEYLGPSPEDADSILDSKPFLDAKFD
CCCHHCCCCCCCEEECCCCEEEEEEEEECCCHHHHHHCCCCCCCHHHHHCCCCCCCCCCC
YLALGHIHSERSEKIGSLLIAYPGSPRIVSSGEFGPRSVNIVTLGKNGTPVLQKKIISSA
EEEEHHHHHHHHHHHCCEEEEECCCCCEEECCCCCCCEEEEEEECCCCCHHHHHHHHHCC
GEFKEFSLSANLAGQIPELSKIPALISELDFVRIKISGIVEDEHIVSETLDNFSKSLICR
CCCEEEEECCCCCCCCCCHHHHHHHHHCCCEEEEEEEEEECHHHHHHHHHHHHHHHHHHH
KLEIKTNDLKTSSALIDNPIAKVFYDKLMDKKSNWNGQNSPDWNEVLVLGLEQIEEFSGK
EEEEECCCCCCHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCC
K
C
>Mature Secondary Structure
MIRFLHTADLHLSLKEKVYSLSVLKEIVSTAKTEKCTHILFCGDLFDRNSDIASLKEDVK
CEEEEEECCEEEEHHHHHHHHHHHHHHHHHHHHCCCEEEEEECHHHCCCCCHHHHHHHHH
EILTSFSGKILFIPGNHEELGISEGSYPISADLSPISYPQKNDRFKLWFEEIDGVDAEFF
HHHHHHCCEEEEEECCCCEECCCCCCCCEECCCCCCCCCCCCCCEEEEHHHHCCCCHHHH
GFPFRRNLDYSNIQFNEKKTLYRIALLHGTDTKLVEYLGPSPEDADSILDSKPFLDAKFD
CCCHHCCCCCCCEEECCCCEEEEEEEEECCCHHHHHHCCCCCCCHHHHHCCCCCCCCCCC
YLALGHIHSERSEKIGSLLIAYPGSPRIVSSGEFGPRSVNIVTLGKNGTPVLQKKIISSA
EEEEHHHHHHHHHHHCCEEEEECCCCCEEECCCCCCCEEEEEEECCCCCHHHHHHHHHCC
GEFKEFSLSANLAGQIPELSKIPALISELDFVRIKISGIVEDEHIVSETLDNFSKSLICR
CCCEEEEECCCCCCCCCCHHHHHHHHHCCCEEEEEEEEEECHHHHHHHHHHHHHHHHHHH
KLEIKTNDLKTSSALIDNPIAKVFYDKLMDKKSNWNGQNSPDWNEVLVLGLEQIEEFSGK
EEEEECCCCCCHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCC
K
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA