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The map label for this gene is 45359001

Identifier: 45359001

GI number: 45359001

Start: 1409164

End: 1410327

Strand: Direct

Name: 45359001

Synonym: MMP1438

Alternate gene names: NA

Gene position: 1409164-1410327 (Clockwise)

Preceding gene: 45359000

Following gene: 45359002

Centisome position: 84.83

GC content: 35.82

Gene sequence:

>1164_bases
ATGGATTGGCCGTTTAAAGCTTTTACATTAACGTTAATTACACTATCCTTATTGGCAGTCACTAGCGCAAATTGTGGCTT
TGATGGATGTGAACCAACTTTTTCAAACGTAACTTACCAAAATTTTAACGAAAACTATTCTAATTTATTTGATAATAACC
ACAATCTATTCTTCGAATTAAACAGCCCTTTTAAAAATAATATGGAGTACAAAACTTTTGAAGTTAAAGCATATGCTCCA
TTAAAGAAAACGTCTTCAAAAATAGATTTGCTTGAATCAAGATATGTCCCAGTAACTACAGTAGACACTTCTTCTGAAGA
TAATACCGACACTTCTTCTGAAGATAATACCGACACTTCTTCTGAAGATAATACCGACACTTCTTCTGAAGATAATACCG
ACACTTCTTCTGAAGATAATACCGACACTTCTTCTGAAGATAATACCGACACTTCTTCTGAAGATAATACCGACACTTCT
TCTGAAGATTACGTTTATTTACCCTCAAAAATAACACAATCTCCAAAAACATCGCTATATATCATTAAAACTACCCCTGA
ACCAGTAGTAGAAGAACCAGTAGTAGAAGAACCAGTAGTAGAAGAACCAGTAGTAGAAGAACCAGTAGTAGAAGAACCAG
TAGTAGAAGAACCAGTAGTAGAAGAACCAGTAGTAGAAGAACCAGTAGTAGAAGAACCAGTAGTATATAAAAACGCTCAG
ATTGAGCAATATATATTTGAATATACTAACATGGAGCGCTCTTCATATGGTCTTGAAGAGTTAGTACTTGATAATGCATT
AAGCCAAATTTCACAAGATCACAGTGACGACATGGCAGAAAATGATTATTTTTCCCATATAAACTTGGATGGGGAAACAC
CTACCGATAGAGCTATTGCAGCAGACTATAACGTTGTAAAATACCTCGGAGACGGTTATTACTCCACAGGAATTGGCGAA
AATATTGCAAAAATGCCTACCGGAAATGTAATTGGAATTGGATATGTTTCAGACGATGCTGAAAGTATTGCAAAAGCAAT
TGTGGACGCATGGATGGACAGCGATGGCCACAGAGCAAATATTCTAAACTCCCAATACACCAATATGGGCATTGGCGTTG
CATTTGATGGTACGTATTACATTGCAACACAAAATTTCTACTAA

Upstream 100 bases:

>100_bases
GATATTAAGTCAAAATTATAGAAAACCATATAAATTGATCTTATATATTCAATAACGGGTAATCCCCCAATATTCAAAAA
TATATAATGGAGACTAAACA

Downstream 100 bases:

>100_bases
TTAACCTACAAATCTATCTTTTTTTATTTTTTTCAACCGAAATTTAAAGCTATTGCTCATTTATCAATTTTTCTTGAATT
TAAAACCCAAAAATATTAAT

Product: hypothetical protein

Products: NA

Alternate protein names: Allergen V5/Tpx-1 ; SCP-Like Extracellular Protein; Transmembrane Protein; Allergen V5/Tpx-1 Family Protein; RNA Polymerase ECF-Subfamily Sigma Factor; Domains; Lipoprotein; Calcium-Chelating Exported Protein; Allergen V5/Tpx-1 Related Protein; SCP/PR1 Domain-Containing Protein; Copper Amine Oxidase-Like Protein; Beta-Galactosidase; Scp-Like Extracellular; Copper Amine Oxidase Domain-Containing Protein

Number of amino acids: Translated: 387; Mature: 387

Protein sequence:

>387_residues
MDWPFKAFTLTLITLSLLAVTSANCGFDGCEPTFSNVTYQNFNENYSNLFDNNHNLFFELNSPFKNNMEYKTFEVKAYAP
LKKTSSKIDLLESRYVPVTTVDTSSEDNTDTSSEDNTDTSSEDNTDTSSEDNTDTSSEDNTDTSSEDNTDTSSEDNTDTS
SEDYVYLPSKITQSPKTSLYIIKTTPEPVVEEPVVEEPVVEEPVVEEPVVEEPVVEEPVVEEPVVEEPVVEEPVVYKNAQ
IEQYIFEYTNMERSSYGLEELVLDNALSQISQDHSDDMAENDYFSHINLDGETPTDRAIAADYNVVKYLGDGYYSTGIGE
NIAKMPTGNVIGIGYVSDDAESIAKAIVDAWMDSDGHRANILNSQYTNMGIGVAFDGTYYIATQNFY

Sequences:

>Translated_387_residues
MDWPFKAFTLTLITLSLLAVTSANCGFDGCEPTFSNVTYQNFNENYSNLFDNNHNLFFELNSPFKNNMEYKTFEVKAYAP
LKKTSSKIDLLESRYVPVTTVDTSSEDNTDTSSEDNTDTSSEDNTDTSSEDNTDTSSEDNTDTSSEDNTDTSSEDNTDTS
SEDYVYLPSKITQSPKTSLYIIKTTPEPVVEEPVVEEPVVEEPVVEEPVVEEPVVEEPVVEEPVVEEPVVEEPVVYKNAQ
IEQYIFEYTNMERSSYGLEELVLDNALSQISQDHSDDMAENDYFSHINLDGETPTDRAIAADYNVVKYLGDGYYSTGIGE
NIAKMPTGNVIGIGYVSDDAESIAKAIVDAWMDSDGHRANILNSQYTNMGIGVAFDGTYYIATQNFY
>Mature_387_residues
MDWPFKAFTLTLITLSLLAVTSANCGFDGCEPTFSNVTYQNFNENYSNLFDNNHNLFFELNSPFKNNMEYKTFEVKAYAP
LKKTSSKIDLLESRYVPVTTVDTSSEDNTDTSSEDNTDTSSEDNTDTSSEDNTDTSSEDNTDTSSEDNTDTSSEDNTDTS
SEDYVYLPSKITQSPKTSLYIIKTTPEPVVEEPVVEEPVVEEPVVEEPVVEEPVVEEPVVEEPVVEEPVVEEPVVYKNAQ
IEQYIFEYTNMERSSYGLEELVLDNALSQISQDHSDDMAENDYFSHINLDGETPTDRAIAADYNVVKYLGDGYYSTGIGE
NIAKMPTGNVIGIGYVSDDAESIAKAIVDAWMDSDGHRANILNSQYTNMGIGVAFDGTYYIATQNFY

Specific function: Unknown

COG id: COG2340

COG function: function code S; Uncharacterized protein with SCP/PR1 domains

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 43129; Mature: 43129

Theoretical pI: Translated: 3.62; Mature: 3.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDWPFKAFTLTLITLSLLAVTSANCGFDGCEPTFSNVTYQNFNENYSNLFDNNHNLFFEL
CCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEECCCCCHHHHHHCCCCEEEEEE
NSPFKNNMEYKTFEVKAYAPLKKTSSKIDLLESRYVPVTTVDTSSEDNTDTSSEDNTDTS
CCCCCCCCCEEEEEEEEECCHHHCCCHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCC
SEDNTDTSSEDNTDTSSEDNTDTSSEDNTDTSSEDNTDTSSEDYVYLPSKITQSPKTSLY
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCHHHCCCCCCEEE
IIKTTPEPVVEEPVVEEPVVEEPVVEEPVVEEPVVEEPVVEEPVVEEPVVEEPVVYKNAQ
EEECCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCH
IEQYIFEYTNMERSSYGLEELVLDNALSQISQDHSDDMAENDYFSHINLDGETPTDRAIA
HHHHHHHHHCCCHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCEEE
ADYNVVKYLGDGYYSTGIGENIAKMPTGNVIGIGYVSDDAESIAKAIVDAWMDSDGHRAN
CCCHHHHHHCCCCCCCCCCCCHHHCCCCCEEEEEEECCCHHHHHHHHHHHHHCCCCCEEE
ILNSQYTNMGIGVAFDGTYYIATQNFY
ECCCCCCCCCEEEEECCEEEEEECCCC
>Mature Secondary Structure
MDWPFKAFTLTLITLSLLAVTSANCGFDGCEPTFSNVTYQNFNENYSNLFDNNHNLFFEL
CCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEECCCCCHHHHHHCCCCEEEEEE
NSPFKNNMEYKTFEVKAYAPLKKTSSKIDLLESRYVPVTTVDTSSEDNTDTSSEDNTDTS
CCCCCCCCCEEEEEEEEECCHHHCCCHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCC
SEDNTDTSSEDNTDTSSEDNTDTSSEDNTDTSSEDNTDTSSEDYVYLPSKITQSPKTSLY
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCHHHCCCCCCEEE
IIKTTPEPVVEEPVVEEPVVEEPVVEEPVVEEPVVEEPVVEEPVVEEPVVEEPVVYKNAQ
EEECCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCH
IEQYIFEYTNMERSSYGLEELVLDNALSQISQDHSDDMAENDYFSHINLDGETPTDRAIA
HHHHHHHHHCCCHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCEEE
ADYNVVKYLGDGYYSTGIGENIAKMPTGNVIGIGYVSDDAESIAKAIVDAWMDSDGHRAN
CCCHHHHHHCCCCCCCCCCCCHHHCCCCCEEEEEEECCCHHHHHHHHHHHHHCCCCCEEE
ILNSQYTNMGIGVAFDGTYYIATQNFY
ECCCCCCCCCEEEEECCEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA