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The map label for this gene is ef1B [H]

Identifier: 45358964

GI number: 45358964

Start: 1383440

End: 1383709

Strand: Direct

Name: ef1B [H]

Synonym: MMP1401

Alternate gene names: 45358964

Gene position: 1383440-1383709 (Clockwise)

Preceding gene: 45358963

Following gene: 45358965

Centisome position: 83.28

GC content: 37.78

Gene sequence:

>270_bases
ATGGCTACAGTTATCGCAAAAGTAAAAGTAATGCCTACAAGCCCAGAAGTAGAAAAAGAATCTTTAAAAGAATCTTTAAA
AGAACTCGTTGAACAAAACGATGCAAAATGCAGGGGAGTAACTGACGAACCACTCGCATTTGGACTCTACACTGTATATG
TAATGGTTGAAATGGAAGAAAAAGAAGGCGGAATGGACCCTATCGAAGAAGCTATGAACGCTTTAGAAAATGTAGAAAGC
GCTGAAGTAGTTGAACTTTCACTCGTTTAA

Upstream 100 bases:

>100_bases
AGATGCGAAAAATGCAGAAAATTAAGCAACGGATACAGTTGCCCAGTATGTGGATACGAAGGTCCTTAAATTAATCTAAA
AACGAAACTTAGGTGAAAAT

Downstream 100 bases:

>100_bases
TTTCACCAATACTAATTTTTTAAATAACGAAAAATAGCCCTAACTTAAAATAACACTCATTCTAAGCTTTAATTCAAAAT
ATGGGATTGTTATGATAAAC

Product: elongation factor 1-beta

Products: GDP; phosphate

Alternate protein names: EF-1-beta; aEF-1beta [H]

Number of amino acids: Translated: 89; Mature: 88

Protein sequence:

>89_residues
MATVIAKVKVMPTSPEVEKESLKESLKELVEQNDAKCRGVTDEPLAFGLYTVYVMVEMEEKEGGMDPIEEAMNALENVES
AEVVELSLV

Sequences:

>Translated_89_residues
MATVIAKVKVMPTSPEVEKESLKESLKELVEQNDAKCRGVTDEPLAFGLYTVYVMVEMEEKEGGMDPIEEAMNALENVES
AEVVELSLV
>Mature_88_residues
ATVIAKVKVMPTSPEVEKESLKESLKELVEQNDAKCRGVTDEPLAFGLYTVYVMVEMEEKEGGMDPIEEAMNALENVESA
EVVELSLV

Specific function: Promotes the exchange of GDP for GTP in EF-1-alpha/GDP, thus allowing the regeneration of EF-1-alpha/GTP that could then be used to form the ternary complex EF-1-alpha/GTP/AAtRNA [H]

COG id: COG2092

COG function: function code J; Translation elongation factor EF-1beta

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the EF-1-beta/EF-1-delta family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014717
- InterPro:   IPR004542
- InterPro:   IPR014038 [H]

Pfam domain/function: PF00736 EF1_GNE [H]

EC number: 3.6.5.3

Molecular weight: Translated: 9820; Mature: 9689

Theoretical pI: Translated: 3.92; Mature: 3.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
6.7 %Met     (Translated Protein)
7.9 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
5.7 %Met     (Mature Protein)
6.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATVIAKVKVMPTSPEVEKESLKESLKELVEQNDAKCRGVTDEPLAFGLYTVYVMVEMEE
CCCEEEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHEEHEEEEEECC
KEGGMDPIEEAMNALENVESAEVVELSLV
CCCCCCHHHHHHHHHHCCCCCCEEEEECC
>Mature Secondary Structure 
ATVIAKVKVMPTSPEVEKESLKESLKELVEQNDAKCRGVTDEPLAFGLYTVYVMVEMEE
CCEEEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHEEHEEEEEECC
KEGGMDPIEEAMNALENVESAEVVELSLV
CCCCCCHHHHHHHHHHCCCCCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: GTP; H2O

Specific reaction: GTP + H2O = GDP + phosphate

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA