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The map label for this gene is 45358963

Identifier: 45358963

GI number: 45358963

Start: 1383244

End: 1383408

Strand: Direct

Name: 45358963

Synonym: MMP1400

Alternate gene names: NA

Gene position: 1383244-1383408 (Clockwise)

Preceding gene: 45358962

Following gene: 45358964

Centisome position: 83.27

GC content: 36.97

Gene sequence:

>165_bases
ATGAAACAAAAATGTACTTCTTGCAATGCAGAAATTGCAGCTAGAGAAAATGCTACAAAATTCTTGTGCCCTAACTGTGG
AAAAGCAGAAATCATAAGATGCGAAAAATGCAGAAAATTAAGCAACGGATACAGTTGCCCAGTATGTGGATACGAAGGTC
CTTAA

Upstream 100 bases:

>100_bases
TGTTAACGGAAATCATCCTGAGAGAATAAATAACATTTTTAAAGGCGTAGTAGATACGTATACGAAAATAACCTTGAAAT
AAAACACTATGGTGAGAAAC

Downstream 100 bases:

>100_bases
ATTAATCTAAAAACGAAACTTAGGTGAAAATATGGCTACAGTTATCGCAAAAGTAAAAGTAATGCCTACAAGCCCAGAAG
TAGAAAAAGAATCTTTAAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 54; Mature: 54

Protein sequence:

>54_residues
MKQKCTSCNAEIAARENATKFLCPNCGKAEIIRCEKCRKLSNGYSCPVCGYEGP

Sequences:

>Translated_54_residues
MKQKCTSCNAEIAARENATKFLCPNCGKAEIIRCEKCRKLSNGYSCPVCGYEGP
>Mature_54_residues
MKQKCTSCNAEIAARENATKFLCPNCGKAEIIRCEKCRKLSNGYSCPVCGYEGP

Specific function: Unknown

COG id: COG2888

COG function: function code J; Predicted Zn-ribbon RNA-binding protein with a function in translation

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011668 [H]

Pfam domain/function: PF07754 DUF1610 [H]

EC number: NA

Molecular weight: Translated: 5919; Mature: 5919

Theoretical pI: Translated: 8.40; Mature: 8.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

14.8 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
16.7 %Cys+Met (Translated Protein)
14.8 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
16.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKQKCTSCNAEIAARENATKFLCPNCGKAEIIRCEKCRKLSNGYSCPVCGYEGP
CCCCCCCCCCEEECCCCCCEEECCCCCCCCEEECHHHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure
MKQKCTSCNAEIAARENATKFLCPNCGKAEIIRCEKCRKLSNGYSCPVCGYEGP
CCCCCCCCCCEEECCCCCCEEECCCCCCCCEEECHHHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]