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The map label for this gene is 45358949

Identifier: 45358949

GI number: 45358949

Start: 1366033

End: 1367040

Strand: Direct

Name: 45358949

Synonym: MMP1386

Alternate gene names: NA

Gene position: 1366033-1367040 (Clockwise)

Preceding gene: 45358948

Following gene: 45358950

Centisome position: 82.23

GC content: 32.94

Gene sequence:

>1008_bases
GTGAATGTACGACTTATCGAATGCTATGTTCCAAAAAAGATATTTGCAGGATATGAAGAATCGCTTGGAGATAACCTTGA
AAACATTATCTGGCACAGCATTTGTGAAGAATCAAATTATACTGTAATTAGATTACTTACCGAAACAGAACACGTTGAAA
AAGTAATCGATGTACTCTCCTCAAAATACGGCGGATCAAATTTTAGAATTTTGGTAACTGAACCAACTGCAACAATTCCG
GAAATCAAAAAAGAAGAAAAAGTAGAAGTTGAAGATAAAACCCCAAAAAGAGTTTCAAGACATGAAATAATTGGAAAAAT
AGGAGATATATCCAATCTTTCAAAAGAATATTACTCATTATTATTTTTAGCTGCGGTTGTTGCATCTATTGGAATTTGGT
TAGATGATGTTGCATTGATAATTGGTTCTATGATAATTGCACCTTTTTTAAGCCCCATGATTTCATTCACGTTCTCAATT
GCAGTCATGGATACATCTCTTGCAAAAAAATCTTTGAAAAATTTAATATTGGGAATTTTAACAGTACTTGTATTTTCATT
CTTTATTGGAACATTCATACATGTAAGTCCCGAAAGCCCGCAAGTAGCATCCAGAATGAATTTAGGCTTGCAAAATATTG
TAATTGCACTTTCAGCAGGGTTTGTTGGTACACTTTCAATGTTAATCCCAGAAATTTCATCAACTGTTGTTGGAGTTATG
ATTGCAGTTGCCCTGATGCCCCCACTCGTTGCCTTTGGTTTAATGCTTGGTTCAGGATATTACTTAGAATCAGTCCCGAT
TCTGATACTATTTATTGTAAATATAATCTCAGTTAATTTTGCGTCTGCGTCATTGTTTTATATTTACGGCATAACGCCAT
ATAAATGGTGGGAAATCGAAAAAGCAAGGAAATTATCAATATTTACCATAATATTCTGGTTCTCAAATCTCTTAATTCTT
GCAGGTATTATCATGCTATTTGGAAATGGAACTTTGAAAATAATATAA

Upstream 100 bases:

>100_bases
AAACTTTTTTTACTATTTTTTTAAATAAATTTTCGACAATTATATTATATAGTTTTTTCATAAGTTGTTTTATTGTTTAA
TCTGGTTTTGAGGGATTTAC

Downstream 100 bases:

>100_bases
ATCCTTAGAAAAATAAATTAGAGTAGATAACTTTGGGGATGAGATTATGACCAGAAATCCTGTTGTTGCAGGGATGTTTT
ATCCTGCTGAATACCATGAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 335; Mature: 335

Protein sequence:

>335_residues
MNVRLIECYVPKKIFAGYEESLGDNLENIIWHSICEESNYTVIRLLTETEHVEKVIDVLSSKYGGSNFRILVTEPTATIP
EIKKEEKVEVEDKTPKRVSRHEIIGKIGDISNLSKEYYSLLFLAAVVASIGIWLDDVALIIGSMIIAPFLSPMISFTFSI
AVMDTSLAKKSLKNLILGILTVLVFSFFIGTFIHVSPESPQVASRMNLGLQNIVIALSAGFVGTLSMLIPEISSTVVGVM
IAVALMPPLVAFGLMLGSGYYLESVPILILFIVNIISVNFASASLFYIYGITPYKWWEIEKARKLSIFTIIFWFSNLLIL
AGIIMLFGNGTLKII

Sequences:

>Translated_335_residues
MNVRLIECYVPKKIFAGYEESLGDNLENIIWHSICEESNYTVIRLLTETEHVEKVIDVLSSKYGGSNFRILVTEPTATIP
EIKKEEKVEVEDKTPKRVSRHEIIGKIGDISNLSKEYYSLLFLAAVVASIGIWLDDVALIIGSMIIAPFLSPMISFTFSI
AVMDTSLAKKSLKNLILGILTVLVFSFFIGTFIHVSPESPQVASRMNLGLQNIVIALSAGFVGTLSMLIPEISSTVVGVM
IAVALMPPLVAFGLMLGSGYYLESVPILILFIVNIISVNFASASLFYIYGITPYKWWEIEKARKLSIFTIIFWFSNLLIL
AGIIMLFGNGTLKII
>Mature_335_residues
MNVRLIECYVPKKIFAGYEESLGDNLENIIWHSICEESNYTVIRLLTETEHVEKVIDVLSSKYGGSNFRILVTEPTATIP
EIKKEEKVEVEDKTPKRVSRHEIIGKIGDISNLSKEYYSLLFLAAVVASIGIWLDDVALIIGSMIIAPFLSPMISFTFSI
AVMDTSLAKKSLKNLILGILTVLVFSFFIGTFIHVSPESPQVASRMNLGLQNIVIALSAGFVGTLSMLIPEISSTVVGVM
IAVALMPPLVAFGLMLGSGYYLESVPILILFIVNIISVNFASASLFYIYGITPYKWWEIEKARKLSIFTIIFWFSNLLIL
AGIIMLFGNGTLKII

Specific function: Unknown

COG id: COG1808

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005233
- InterPro:   IPR013031
- InterPro:   IPR005240 [H]

Pfam domain/function: PF04087 DUF389 [H]

EC number: NA

Molecular weight: Translated: 37117; Mature: 37117

Theoretical pI: Translated: 5.74; Mature: 5.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNVRLIECYVPKKIFAGYEESLGDNLENIIWHSICEESNYTVIRLLTETEHVEKVIDVLS
CCEEEEEEECCHHHHCCHHHHHCCCHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHH
SKYGGSNFRILVTEPTATIPEIKKEEKVEVEDKTPKRVSRHEIIGKIGDISNLSKEYYSL
CCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHH
LFLAAVVASIGIWLDDVALIIGSMIIAPFLSPMISFTFSIAVMDTSLAKKSLKNLILGIL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TVLVFSFFIGTFIHVSPESPQVASRMNLGLQNIVIALSAGFVGTLSMLIPEISSTVVGVM
HHHHHHHHHHHEEEECCCCCHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
IAVALMPPLVAFGLMLGSGYYLESVPILILFIVNIISVNFASASLFYIYGITPYKWWEIE
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCEEEEHH
KARKLSIFTIIFWFSNLLILAGIIMLFGNGTLKII
HCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEC
>Mature Secondary Structure
MNVRLIECYVPKKIFAGYEESLGDNLENIIWHSICEESNYTVIRLLTETEHVEKVIDVLS
CCEEEEEEECCHHHHCCHHHHHCCCHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHH
SKYGGSNFRILVTEPTATIPEIKKEEKVEVEDKTPKRVSRHEIIGKIGDISNLSKEYYSL
CCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHH
LFLAAVVASIGIWLDDVALIIGSMIIAPFLSPMISFTFSIAVMDTSLAKKSLKNLILGIL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TVLVFSFFIGTFIHVSPESPQVASRMNLGLQNIVIALSAGFVGTLSMLIPEISSTVVGVM
HHHHHHHHHHHEEEECCCCCHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
IAVALMPPLVAFGLMLGSGYYLESVPILILFIVNIISVNFASASLFYIYGITPYKWWEIE
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCEEEEHH
KARKLSIFTIIFWFSNLLILAGIIMLFGNGTLKII
HCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]