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The map label for this gene is 45358950

Identifier: 45358950

GI number: 45358950

Start: 1367087

End: 1367941

Strand: Direct

Name: 45358950

Synonym: MMP1387

Alternate gene names: NA

Gene position: 1367087-1367941 (Clockwise)

Preceding gene: 45358949

Following gene: 45358956

Centisome position: 82.3

GC content: 37.08

Gene sequence:

>855_bases
ATGACCAGAAATCCTGTTGTTGCAGGGATGTTTTATCCTGCTGAATACCATGAATTACTTGAAATGATCGAATACTGCTA
TTTGAACCCAAGGGGCCCTAGAGAACTGCCTTCAAAACGGGGAAAATATACAAAACCGCTTGGAATCGTATCACCCCATG
CAGGATATATCTACTCTGGACCTGTTGCCGCACACGGCTACAAAAAAATATCTGAAAACATAAGCGGGGAAATCACAGCG
ATAATTCTTGGTCCAAACCATACAGGACTTGGCTCTGGAATTGCCACCATGAAAGGAACATGGAAAACGCCTTTTGGAGA
TATGGAAATCGATAACGAATTTGCTGATAGATTATGGAAAGAATGCGATATTTTAGATATGGATGAAAATTCACATTTGA
GAGAACACTCAATAGAAGTACAGCTTCCATTTTTAAAGCATCTTGAAGACCTAAATATCGCAAAATTCAAATTTGTCCCA
ATATCTATGATGATGCAGGATTATGAATCTTGTATTGATGTAGGGTATGTTATTGCAAAAGTTGCAAGGGAATTAAACAG
AAAAATTGTAATAATTGCTTCTACGGACTTTTCACACTACGAACCCCAAGAACAGGCCTCAAAAAAAGATGCAGTTGTTA
TAAAAGACATTTTAGAATTAAACGATGAAGAAATATTCACTGATGTTGTAACACACACTATAAGCATGTGCGGATACGGG
CCAGTTATTGCAATGGTTAAAGCAATGAAAGATTTGGGTGCTAGGACCTCATATTTACTTTATTATTCAACTTCTGGCGA
TGTTACAAAAGATTATTCAGAAGTCGTTGGATATGCTTCACTGCTAATAAAATAG

Upstream 100 bases:

>100_bases
ATTCTTGCAGGTATTATCATGCTATTTGGAAATGGAACTTTGAAAATAATATAAATCCTTAGAAAAATAAATTAGAGTAG
ATAACTTTGGGGATGAGATT

Downstream 100 bases:

>100_bases
GTTTAAATTAACTAAGCTAAAATAATAAATTAATAGTTTCTAAAATTAGTTCGAGTTTAAATAATCCTTAAGTTCTTTTT
TTAAATCATTTACAGAAGGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 284; Mature: 283

Protein sequence:

>284_residues
MTRNPVVAGMFYPAEYHELLEMIEYCYLNPRGPRELPSKRGKYTKPLGIVSPHAGYIYSGPVAAHGYKKISENISGEITA
IILGPNHTGLGSGIATMKGTWKTPFGDMEIDNEFADRLWKECDILDMDENSHLREHSIEVQLPFLKHLEDLNIAKFKFVP
ISMMMQDYESCIDVGYVIAKVARELNRKIVIIASTDFSHYEPQEQASKKDAVVIKDILELNDEEIFTDVVTHTISMCGYG
PVIAMVKAMKDLGARTSYLLYYSTSGDVTKDYSEVVGYASLLIK

Sequences:

>Translated_284_residues
MTRNPVVAGMFYPAEYHELLEMIEYCYLNPRGPRELPSKRGKYTKPLGIVSPHAGYIYSGPVAAHGYKKISENISGEITA
IILGPNHTGLGSGIATMKGTWKTPFGDMEIDNEFADRLWKECDILDMDENSHLREHSIEVQLPFLKHLEDLNIAKFKFVP
ISMMMQDYESCIDVGYVIAKVARELNRKIVIIASTDFSHYEPQEQASKKDAVVIKDILELNDEEIFTDVVTHTISMCGYG
PVIAMVKAMKDLGARTSYLLYYSTSGDVTKDYSEVVGYASLLIK
>Mature_283_residues
TRNPVVAGMFYPAEYHELLEMIEYCYLNPRGPRELPSKRGKYTKPLGIVSPHAGYIYSGPVAAHGYKKISENISGEITAI
ILGPNHTGLGSGIATMKGTWKTPFGDMEIDNEFADRLWKECDILDMDENSHLREHSIEVQLPFLKHLEDLNIAKFKFVPI
SMMMQDYESCIDVGYVIAKVARELNRKIVIIASTDFSHYEPQEQASKKDAVVIKDILELNDEEIFTDVVTHTISMCGYGP
VIAMVKAMKDLGARTSYLLYYSTSGDVTKDYSEVVGYASLLIK

Specific function: Unknown

COG id: COG1355

COG function: function code R; Predicted dioxygenase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0103 family [H]

Homologues:

Organism=Homo sapiens, GI7705720, Length=299, Percent_Identity=24.7491638795987, Blast_Score=77, Evalue=1e-14,
Organism=Caenorhabditis elegans, GI32566861, Length=288, Percent_Identity=26.0416666666667, Blast_Score=81, Evalue=7e-16,
Organism=Caenorhabditis elegans, GI25146594, Length=264, Percent_Identity=26.8939393939394, Blast_Score=80, Evalue=8e-16,
Organism=Drosophila melanogaster, GI21357419, Length=253, Percent_Identity=28.0632411067194, Blast_Score=77, Evalue=1e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020619
- InterPro:   IPR002737 [H]

Pfam domain/function: PF01875 Memo [H]

EC number: NA

Molecular weight: Translated: 31921; Mature: 31790

Theoretical pI: Translated: 5.38; Mature: 5.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRNPVVAGMFYPAEYHELLEMIEYCYLNPRGPRELPSKRGKYTKPLGIVSPHAGYIYSG
CCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCCCCCCCCCEEECC
PVAAHGYKKISENISGEITAIILGPNHTGLGSGIATMKGTWKTPFGDMEIDNEFADRLWK
CHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCHHHCCCCCCCCCCCCCCCHHHHHHHHH
ECDILDMDENSHLREHSIEVQLPFLKHLEDLNIAKFKFVPISMMMQDYESCIDVGYVIAK
HCCCEECCCCCCHHHCCEEEEEHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHH
VARELNRKIVIIASTDFSHYEPQEQASKKDAVVIKDILELNDEEIFTDVVTHTISMCGYG
HHHHHCCEEEEEEECCCCCCCCHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHCCCC
PVIAMVKAMKDLGARTSYLLYYSTSGDVTKDYSEVVGYASLLIK
HHHHHHHHHHHCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TRNPVVAGMFYPAEYHELLEMIEYCYLNPRGPRELPSKRGKYTKPLGIVSPHAGYIYSG
CCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCCCCCCCCCEEECC
PVAAHGYKKISENISGEITAIILGPNHTGLGSGIATMKGTWKTPFGDMEIDNEFADRLWK
CHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCHHHCCCCCCCCCCCCCCCHHHHHHHHH
ECDILDMDENSHLREHSIEVQLPFLKHLEDLNIAKFKFVPISMMMQDYESCIDVGYVIAK
HCCCEECCCCCCHHHCCEEEEEHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHH
VARELNRKIVIIASTDFSHYEPQEQASKKDAVVIKDILELNDEEIFTDVVTHTISMCGYG
HHHHHCCEEEEEEECCCCCCCCHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHCCCC
PVIAMVKAMKDLGARTSYLLYYSTSGDVTKDYSEVVGYASLLIK
HHHHHHHHHHHCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA