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The map label for this gene is nusA

Identifier: 45358929

GI number: 45358929

Start: 1347192

End: 1347713

Strand: Direct

Name: nusA

Synonym: MMP1366

Alternate gene names: NA

Gene position: 1347192-1347713 (Clockwise)

Preceding gene: 45358928

Following gene: 45358930

Centisome position: 81.1

GC content: 33.91

Gene sequence:

>522_bases
ATGAGAATTAAACTTAATACAGAAGATATCATGAGAATCAGTCTCTTCGAAAAGATGACTGGTGCTGACGTGATTGATAG
CACTTCTGATGATGAAAAAATTGTTTTCGTTGTTAAAGAAGGTGACATTGGAGCTGCAATTGGAAAAGGCGGCGAAAATG
TGAGAAATGCAACTGAAAAATTCGGTAAAAAAATAGACTTAATCGAATACTCAGAAGATGTAAAACAGTTCATTAAAAAC
ATCTTTGCTCCAATTGAAGTAGAAGATGTATGGACTAAAAAATTTGGTGACGATTTAGTAGTTTACATAAGAGTTCATCC
AAGATTTAGGAGAGCTATTATTGGAGACAAAGGAAAAAACATTGATAGAGCAGTAGACATCGCAGGAAGGCTTGCAGGTG
TTAAAAATATCAAAGTCGTTGCTGGTTTAAGAAAAGATAACGATAAAAAACCAAAACAGGAAGAAGTACCTGAAAAAGCA
GCAGAATCATCTAAAAATGTTGAAGCTGAAGAAAACCAATAA

Upstream 100 bases:

>100_bases
TGTGGAAAACCATTCCCTGTTTCCGCATTGTTGGTTTTAGAACCTGGTAACTCGGCTATTTTAAACGTTAACAATGAAGA
ATAACCGCGGGTGATGGTTG

Downstream 100 bases:

>100_bases
GGTGATTTTATGGCAGGAAGTAAATCTCCAAAAGGAGAATTCGCAGGAAGAAAATTACTTTTAAAAAGAAAAGCAAGCAG
ATGGCACCACTACAAATACG

Product: transcription elongation factor NusA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 173; Mature: 173

Protein sequence:

>173_residues
MRIKLNTEDIMRISLFEKMTGADVIDSTSDDEKIVFVVKEGDIGAAIGKGGENVRNATEKFGKKIDLIEYSEDVKQFIKN
IFAPIEVEDVWTKKFGDDLVVYIRVHPRFRRAIIGDKGKNIDRAVDIAGRLAGVKNIKVVAGLRKDNDKKPKQEEVPEKA
AESSKNVEAEENQ

Sequences:

>Translated_173_residues
MRIKLNTEDIMRISLFEKMTGADVIDSTSDDEKIVFVVKEGDIGAAIGKGGENVRNATEKFGKKIDLIEYSEDVKQFIKN
IFAPIEVEDVWTKKFGDDLVVYIRVHPRFRRAIIGDKGKNIDRAVDIAGRLAGVKNIKVVAGLRKDNDKKPKQEEVPEKA
AESSKNVEAEENQ
>Mature_173_residues
MRIKLNTEDIMRISLFEKMTGADVIDSTSDDEKIVFVVKEGDIGAAIGKGGENVRNATEKFGKKIDLIEYSEDVKQFIKN
IFAPIEVEDVWTKKFGDDLVVYIRVHPRFRRAIIGDKGKNIDRAVDIAGRLAGVKNIKVVAGLRKDNDKKPKQEEVPEKA
AESSKNVEAEENQ

Specific function: Unknown

COG id: COG0195

COG function: function code K; Transcription elongation factor

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 KH domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004087
- InterPro:   IPR015946
- InterPro:   IPR009019
- InterPro:   IPR004088
- InterPro:   IPR004044
- InterPro:   IPR010212 [H]

Pfam domain/function: PF07650 KH_2 [H]

EC number: NA

Molecular weight: Translated: 19404; Mature: 19404

Theoretical pI: Translated: 6.09; Mature: 6.09

Prosite motif: PS50084 KH_TYPE_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRIKLNTEDIMRISLFEKMTGADVIDSTSDDEKIVFVVKEGDIGAAIGKGGENVRNATEK
CEEEECHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCCEECCCCCHHHHHHHHH
FGKKIDLIEYSEDVKQFIKNIFAPIEVEDVWTKKFGDDLVVYIRVHPRFRRAIIGDKGKN
HCCCCCEEHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCEEEEEEECCHHHHHHHCCCCCC
IDRAVDIAGRLAGVKNIKVVAGLRKDNDKKPKQEEVPEKAAESSKNVEAEENQ
HHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MRIKLNTEDIMRISLFEKMTGADVIDSTSDDEKIVFVVKEGDIGAAIGKGGENVRNATEK
CEEEECHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCCEECCCCCHHHHHHHHH
FGKKIDLIEYSEDVKQFIKNIFAPIEVEDVWTKKFGDDLVVYIRVHPRFRRAIIGDKGKN
HCCCCCEEHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCEEEEEEECCHHHHHHHCCCCCC
IDRAVDIAGRLAGVKNIKVVAGLRKDNDKKPKQEEVPEKAAESSKNVEAEENQ
HHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2475640 [H]