Definition | Vibrio vulnificus YJ016 chromosome I, complete sequence. |
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Accession | NC_005139 |
Length | 3,354,505 |
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The map label for this gene is yjeI [C]
Identifier: 37680681
GI number: 37680681
Start: 2530505
End: 2530837
Strand: Direct
Name: yjeI [C]
Synonym: VV2497
Alternate gene names: 37680681
Gene position: 2530505-2530837 (Clockwise)
Preceding gene: 37680680
Following gene: 37680683
Centisome position: 75.44
GC content: 46.25
Gene sequence:
>333_bases ATGAAAAACATCGGCTTACTGTTACTTGCTAGCCTGTTTTTAGCGGGGTGTACCACCCCAACCCATCAGCCACTTTCCGG CTCACAAGCAATCGAAATCCGCATTGATGACCAGTTTAATCCTAAACAGTGTCAGTATCTTGGCACGGTGACAGGAAATG AAGGTCATTGGTATAGCTATCTCTTCTTTGCCAATGACACCATGATGCAGGGAGCGGTGAATGATTTGAAAAACAATGCC AAAGAATTAGATGCAGACACCATCTTCGTCATTGCGCCGCAGGCGTTTGTCACCTCTTTTAGCTTGCTTGGCACCGCTTA TCGCTGCCAATAA
Upstream 100 bases:
>100_bases ACGCCCCCAACACCAAGCCAATTTGTACATATACTTCCTTGGGGGCTGCTAATTGTTAGCTGGTTGGGATTTATTGTTTA CGCCATGATGAGGAACTAAT
Downstream 100 bases:
>100_bases AAAAAGCCAGCGAATGCTGGCTTACGCACGAAATCCAAGGCTGCTGGCGATATCTTTCTCACGTTCCATAACCCATTGGC TATCAAATGGTCCCCAGTCT
Product: putative outer membrane lipoprotein
Products: NA
Alternate protein names: Outermembrane Lipoprotein; Ubiquinone Biosynthesis Protein AarF; Lipoprotein
Number of amino acids: Translated: 110; Mature: 110
Protein sequence:
>110_residues MKNIGLLLLASLFLAGCTTPTHQPLSGSQAIEIRIDDQFNPKQCQYLGTVTGNEGHWYSYLFFANDTMMQGAVNDLKNNA KELDADTIFVIAPQAFVTSFSLLGTAYRCQ
Sequences:
>Translated_110_residues MKNIGLLLLASLFLAGCTTPTHQPLSGSQAIEIRIDDQFNPKQCQYLGTVTGNEGHWYSYLFFANDTMMQGAVNDLKNNA KELDADTIFVIAPQAFVTSFSLLGTAYRCQ >Mature_110_residues MKNIGLLLLASLFLAGCTTPTHQPLSGSQAIEIRIDDQFNPKQCQYLGTVTGNEGHWYSYLFFANDTMMQGAVNDLKNNA KELDADTIFVIAPQAFVTSFSLLGTAYRCQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12126; Mature: 12126
Theoretical pI: Translated: 4.88; Mature: 4.88
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNIGLLLLASLFLAGCTTPTHQPLSGSQAIEIRIDDQFNPKQCQYLGTVTGNEGHWYSY CCCHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCCCCCEEEEEEEECCCCCEEEE LFFANDTMMQGAVNDLKNNAKELDADTIFVIAPQAFVTSFSLLGTAYRCQ EEEECCCHHHHHHHHHHCCHHHCCCCEEEEEECHHHHHHHHHHCEEECCC >Mature Secondary Structure MKNIGLLLLASLFLAGCTTPTHQPLSGSQAIEIRIDDQFNPKQCQYLGTVTGNEGHWYSY CCCHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCCCCCEEEEEEEECCCCCEEEE LFFANDTMMQGAVNDLKNNAKELDADTIFVIAPQAFVTSFSLLGTAYRCQ EEEECCCHHHHHHHHHHCCHHHCCCCEEEEEECHHHHHHHHHHCEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA