Definition Vibrio vulnificus YJ016 chromosome I, complete sequence.
Accession NC_005139
Length 3,354,505

Click here to switch to the map view.

The map label for this gene is yffB [H]

Identifier: 37680683

GI number: 37680683

Start: 2531285

End: 2531698

Strand: Direct

Name: yffB [H]

Synonym: VV2499

Alternate gene names: 37680683

Gene position: 2531285-2531698 (Clockwise)

Preceding gene: 37680681

Following gene: 37680684

Centisome position: 75.46

GC content: 43.0

Gene sequence:

>414_bases
GTGTTCTGTCGCTTCTTGATAGGATGCAAAACACAACAAAAAGAATTAGCCCAAAAGGAAAAACACATGACCATTACCAT
GTATGGCATTCCTAACTGCGACACCATTAAGAAAGCCAAAAAATGGCTAGAAGACGCAGGCGTTGCTTACGAATTTCATG
ATTATCGTAAGCAAGGTATTAACGCGGAACTTGTGAGTGAGTTTTGTCAGCAATTGACTTGGGAGCAAGTGCTTAATAAG
CGCGGCACCACCTTCCGTCAGTTGACTGACGAGCAAAAAGAGTCGCTCAATGAGACAACCGCCGTTGATTTGCTAGTCGC
ACACCCTGCGATGATCAAACGCCCAATTTTGCGAGTCAATGACCAGCTACACGTTGGCTTTAAAGCAGAACAGTATTCAA
AAATTTTCAATTAA

Upstream 100 bases:

>100_bases
TTTTCTCAGTCTTTTGTTGAGGTTGATCAATAACTCTCCAATCCCCTTAGCGAAAGTGTGAGTTTTTTTGAACTTCAAAA
TATTCCTGACGATATTTTGT

Downstream 100 bases:

>100_bases
TGAAGGATTATCAAGGATGACAGACAGCCCAGTACTGGCTCTAACCAAAGATCTCATCAGTCGCCAGTCGGTAACCCCCG
AAGACGCCGGTTGCCAAGAT

Product: arsenate reductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 137; Mature: 137

Protein sequence:

>137_residues
MFCRFLIGCKTQQKELAQKEKHMTITMYGIPNCDTIKKAKKWLEDAGVAYEFHDYRKQGINAELVSEFCQQLTWEQVLNK
RGTTFRQLTDEQKESLNETTAVDLLVAHPAMIKRPILRVNDQLHVGFKAEQYSKIFN

Sequences:

>Translated_137_residues
MFCRFLIGCKTQQKELAQKEKHMTITMYGIPNCDTIKKAKKWLEDAGVAYEFHDYRKQGINAELVSEFCQQLTWEQVLNK
RGTTFRQLTDEQKESLNETTAVDLLVAHPAMIKRPILRVNDQLHVGFKAEQYSKIFN
>Mature_137_residues
MFCRFLIGCKTQQKELAQKEKHMTITMYGIPNCDTIKKAKKWLEDAGVAYEFHDYRKQGINAELVSEFCQQLTWEQVLNK
RGTTFRQLTDEQKESLNETTAVDLLVAHPAMIKRPILRVNDQLHVGFKAEQYSKIFN

Specific function: Unknown

COG id: COG1393

COG function: function code P; Arsenate reductase and related proteins, glutaredoxin family

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ArsC family [H]

Homologues:

Organism=Escherichia coli, GI1788815, Length=115, Percent_Identity=43.4782608695652, Blast_Score=111, Evalue=2e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006660
- InterPro:   IPR012336
- InterPro:   IPR012335
- InterPro:   IPR006504 [H]

Pfam domain/function: PF03960 ArsC [H]

EC number: NA

Molecular weight: Translated: 15999; Mature: 15999

Theoretical pI: Translated: 8.63; Mature: 8.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFCRFLIGCKTQQKELAQKEKHMTITMYGIPNCDTIKKAKKWLEDAGVAYEFHDYRKQGI
CCCHHHHCCCCHHHHHHHHHHCEEEEEECCCCCHHHHHHHHHHHHCCCCHHHHHHHHHCC
NAELVSEFCQQLTWEQVLNKRGTTFRQLTDEQKESLNETTAVDLLVAHPAMIKRPILRVN
CHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCC
DQLHVGFKAEQYSKIFN
CCEEECCCHHHHHHHCC
>Mature Secondary Structure
MFCRFLIGCKTQQKELAQKEKHMTITMYGIPNCDTIKKAKKWLEDAGVAYEFHDYRKQGI
CCCHHHHCCCCHHHHHHHHHHCEEEEEECCCCCHHHHHHHHHHHHCCCCHHHHHHHHHCC
NAELVSEFCQQLTWEQVLNKRGTTFRQLTDEQKESLNETTAVDLLVAHPAMIKRPILRVN
CHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCC
DQLHVGFKAEQYSKIFN
CCEEECCCHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1644752; 9205837; 9278503; 10493123 [H]