Definition | Vibrio vulnificus YJ016 chromosome I, complete sequence. |
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Accession | NC_005139 |
Length | 3,354,505 |
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The map label for this gene is yffB [H]
Identifier: 37680683
GI number: 37680683
Start: 2531285
End: 2531698
Strand: Direct
Name: yffB [H]
Synonym: VV2499
Alternate gene names: 37680683
Gene position: 2531285-2531698 (Clockwise)
Preceding gene: 37680681
Following gene: 37680684
Centisome position: 75.46
GC content: 43.0
Gene sequence:
>414_bases GTGTTCTGTCGCTTCTTGATAGGATGCAAAACACAACAAAAAGAATTAGCCCAAAAGGAAAAACACATGACCATTACCAT GTATGGCATTCCTAACTGCGACACCATTAAGAAAGCCAAAAAATGGCTAGAAGACGCAGGCGTTGCTTACGAATTTCATG ATTATCGTAAGCAAGGTATTAACGCGGAACTTGTGAGTGAGTTTTGTCAGCAATTGACTTGGGAGCAAGTGCTTAATAAG CGCGGCACCACCTTCCGTCAGTTGACTGACGAGCAAAAAGAGTCGCTCAATGAGACAACCGCCGTTGATTTGCTAGTCGC ACACCCTGCGATGATCAAACGCCCAATTTTGCGAGTCAATGACCAGCTACACGTTGGCTTTAAAGCAGAACAGTATTCAA AAATTTTCAATTAA
Upstream 100 bases:
>100_bases TTTTCTCAGTCTTTTGTTGAGGTTGATCAATAACTCTCCAATCCCCTTAGCGAAAGTGTGAGTTTTTTTGAACTTCAAAA TATTCCTGACGATATTTTGT
Downstream 100 bases:
>100_bases TGAAGGATTATCAAGGATGACAGACAGCCCAGTACTGGCTCTAACCAAAGATCTCATCAGTCGCCAGTCGGTAACCCCCG AAGACGCCGGTTGCCAAGAT
Product: arsenate reductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 137; Mature: 137
Protein sequence:
>137_residues MFCRFLIGCKTQQKELAQKEKHMTITMYGIPNCDTIKKAKKWLEDAGVAYEFHDYRKQGINAELVSEFCQQLTWEQVLNK RGTTFRQLTDEQKESLNETTAVDLLVAHPAMIKRPILRVNDQLHVGFKAEQYSKIFN
Sequences:
>Translated_137_residues MFCRFLIGCKTQQKELAQKEKHMTITMYGIPNCDTIKKAKKWLEDAGVAYEFHDYRKQGINAELVSEFCQQLTWEQVLNK RGTTFRQLTDEQKESLNETTAVDLLVAHPAMIKRPILRVNDQLHVGFKAEQYSKIFN >Mature_137_residues MFCRFLIGCKTQQKELAQKEKHMTITMYGIPNCDTIKKAKKWLEDAGVAYEFHDYRKQGINAELVSEFCQQLTWEQVLNK RGTTFRQLTDEQKESLNETTAVDLLVAHPAMIKRPILRVNDQLHVGFKAEQYSKIFN
Specific function: Unknown
COG id: COG1393
COG function: function code P; Arsenate reductase and related proteins, glutaredoxin family
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ArsC family [H]
Homologues:
Organism=Escherichia coli, GI1788815, Length=115, Percent_Identity=43.4782608695652, Blast_Score=111, Evalue=2e-26,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006660 - InterPro: IPR012336 - InterPro: IPR012335 - InterPro: IPR006504 [H]
Pfam domain/function: PF03960 ArsC [H]
EC number: NA
Molecular weight: Translated: 15999; Mature: 15999
Theoretical pI: Translated: 8.63; Mature: 8.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFCRFLIGCKTQQKELAQKEKHMTITMYGIPNCDTIKKAKKWLEDAGVAYEFHDYRKQGI CCCHHHHCCCCHHHHHHHHHHCEEEEEECCCCCHHHHHHHHHHHHCCCCHHHHHHHHHCC NAELVSEFCQQLTWEQVLNKRGTTFRQLTDEQKESLNETTAVDLLVAHPAMIKRPILRVN CHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCC DQLHVGFKAEQYSKIFN CCEEECCCHHHHHHHCC >Mature Secondary Structure MFCRFLIGCKTQQKELAQKEKHMTITMYGIPNCDTIKKAKKWLEDAGVAYEFHDYRKQGI CCCHHHHCCCCHHHHHHHHHHCEEEEEECCCCCHHHHHHHHHHHHCCCCHHHHHHHHHCC NAELVSEFCQQLTWEQVLNKRGTTFRQLTDEQKESLNETTAVDLLVAHPAMIKRPILRVN CHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCC DQLHVGFKAEQYSKIFN CCEEECCCHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1644752; 9205837; 9278503; 10493123 [H]