Definition | Vibrio vulnificus YJ016 chromosome I, complete sequence. |
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Accession | NC_005139 |
Length | 3,354,505 |
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The map label for this gene is 37680592
Identifier: 37680592
GI number: 37680592
Start: 2438658
End: 2439803
Strand: Direct
Name: 37680592
Synonym: VV2408
Alternate gene names: NA
Gene position: 2438658-2439803 (Clockwise)
Preceding gene: 37680591
Following gene: 37680597
Centisome position: 72.7
GC content: 50.17
Gene sequence:
>1146_bases ATGTGTAACTTACTCAAAATCGTCTTAATAGCCACACTGCTGTTCCTCGCTGGGTGCGATGTTGATGATGCCAGTGATGC CACCAAATACACTAAGCCAACAGTCAACGCAGGTTCCGACCAATACCATACGTTGCCCATCGACACCATTACCCTGCATG GTTCTGCCAAAAGTTGGCCGAAACTGGTGTTCTCTATCAAGACCAAGCAATGGCGACAAATTTCTGGTCCACAGAGCCTA ACCATTTTAAACGCTGACAGCTTTACGGCCACACTGCTCAACCCGACCGTTGCAGGAACGTACATCTTTGAACTTTACGC CAAAGACAGTGGTGATCGCGCCAATACGGACCAAGTGAAGATTGTGCTGCGCGAGCCTCAACCGGTTGTCGCAGCGCGAA AATCATTGGGCTATGAAGACGACTACCAGCAGCTTTGGCAAAGCGTAGCGACAAACTATCCACGCTACGATCAAATTCAA GATGAGTGGCAACAGCTTTATCAGCCCTATTTGATCAAAGCGGCACAGGCGCAAAACGAAGAGCAATGGCGTTCATTAGT CGAAGCCATGTTCACCGAACTGAGTGGACCAAAGCTAACCACCATACAAGCCCCGTCGGCAGAGCGATGGAGAGCGAACC CAACAAGAGCCCTCGCAGTTCGCGGCCGTCAAGACAATGGCATTGGCTTGCTTGAGATAGGCGCTCTACATGAGCAAGAC GCACTCCATGATATAGGTGAGCTGCATGAGATAGATGCGCTGCATGATGTTTCGCTGGCCGATTTCACAAAGCAGCTCGA CGATGCGCTTATGCAGCTTAAGGGGGTTAGCGAGATACGCTTGGAAATAAGAACGCCAAATGCACTTGGCGAACAGGCAC TTTTTACCCTTTTGGAAAAACTCACCACACGCGCGGCTTTGCTGTGCATCAGCCCAAACAAGGAAGCATCTTCTTGTGTC TCACTGCCTGCAAATAGTGACCTCGATGGAGTTGCGTTGTTGATCAACCCAACGTGCGAGCAGACCACTTGTAGGATATT GAGTGAGTATCTCAGCTACCTACACAGTGGCGAACAGCACTTCTACTACATGCCATCACCCGTGCTCGACTCACATTGGC GATTGGTCATGGATCCCGAATCTTAA
Upstream 100 bases:
>100_bases GGGTTATCAAGAGTCGGATTCTGATATCGATTTTTACGACAGTGAAGAGGTCTTTCTCTCCACTGGCATTAGCTACAGTT TCTGATCCGGAGGACTTAAG
Downstream 100 bases:
>100_bases CCCGTTCATCAAAGAAAAAGACGCAATGAAAAAGCGATGCTGTGACAGCATCGCTTTGGTGTTAGTTGAGTTTGTGTCTG CCCAATAACGAATGGGAGAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 381; Mature: 381
Protein sequence:
>381_residues MCNLLKIVLIATLLFLAGCDVDDASDATKYTKPTVNAGSDQYHTLPIDTITLHGSAKSWPKLVFSIKTKQWRQISGPQSL TILNADSFTATLLNPTVAGTYIFELYAKDSGDRANTDQVKIVLREPQPVVAARKSLGYEDDYQQLWQSVATNYPRYDQIQ DEWQQLYQPYLIKAAQAQNEEQWRSLVEAMFTELSGPKLTTIQAPSAERWRANPTRALAVRGRQDNGIGLLEIGALHEQD ALHDIGELHEIDALHDVSLADFTKQLDDALMQLKGVSEIRLEIRTPNALGEQALFTLLEKLTTRAALLCISPNKEASSCV SLPANSDLDGVALLINPTCEQTTCRILSEYLSYLHSGEQHFYYMPSPVLDSHWRLVMDPES
Sequences:
>Translated_381_residues MCNLLKIVLIATLLFLAGCDVDDASDATKYTKPTVNAGSDQYHTLPIDTITLHGSAKSWPKLVFSIKTKQWRQISGPQSL TILNADSFTATLLNPTVAGTYIFELYAKDSGDRANTDQVKIVLREPQPVVAARKSLGYEDDYQQLWQSVATNYPRYDQIQ DEWQQLYQPYLIKAAQAQNEEQWRSLVEAMFTELSGPKLTTIQAPSAERWRANPTRALAVRGRQDNGIGLLEIGALHEQD ALHDIGELHEIDALHDVSLADFTKQLDDALMQLKGVSEIRLEIRTPNALGEQALFTLLEKLTTRAALLCISPNKEASSCV SLPANSDLDGVALLINPTCEQTTCRILSEYLSYLHSGEQHFYYMPSPVLDSHWRLVMDPES >Mature_381_residues MCNLLKIVLIATLLFLAGCDVDDASDATKYTKPTVNAGSDQYHTLPIDTITLHGSAKSWPKLVFSIKTKQWRQISGPQSL TILNADSFTATLLNPTVAGTYIFELYAKDSGDRANTDQVKIVLREPQPVVAARKSLGYEDDYQQLWQSVATNYPRYDQIQ DEWQQLYQPYLIKAAQAQNEEQWRSLVEAMFTELSGPKLTTIQAPSAERWRANPTRALAVRGRQDNGIGLLEIGALHEQD ALHDIGELHEIDALHDVSLADFTKQLDDALMQLKGVSEIRLEIRTPNALGEQALFTLLEKLTTRAALLCISPNKEASSCV SLPANSDLDGVALLINPTCEQTTCRILSEYLSYLHSGEQHFYYMPSPVLDSHWRLVMDPES
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42565; Mature: 42565
Theoretical pI: Translated: 4.76; Mature: 4.76
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MCNLLKIVLIATLLFLAGCDVDDASDATKYTKPTVNAGSDQYHTLPIDTITLHGSAKSWP CCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEECCCCCCCC KLVFSIKTKQWRQISGPQSLTILNADSFTATLLNPTVAGTYIFELYAKDSGDRANTDQVK CEEEEECCHHHHHCCCCCEEEEEECCCCEEEECCCCHHHEEEEEEEECCCCCCCCCCEEE IVLREPQPVVAARKSLGYEDDYQQLWQSVATNYPRYDQIQDEWQQLYQPYLIKAAQAQNE EEEECCCCHHHHHHHCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCH EQWRSLVEAMFTELSGPKLTTIQAPSAERWRANPTRALAVRGRQDNGIGLLEIGALHEQD HHHHHHHHHHHHHCCCCEEEEEECCCCHHCCCCCCEEEEEECCCCCCCEEEEECCCCCHH ALHDIGELHEIDALHDVSLADFTKQLDDALMQLKGVSEIRLEIRTPNALGEQALFTLLEK HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHH LTTRAALLCISPNKEASSCVSLPANSDLDGVALLINPTCEQTTCRILSEYLSYLHSGEQH HHHHEEEEEECCCCCCHHEEECCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHCCCCE FYYMPSPVLDSHWRLVMDPES EEECCCCCCCCCCEEEECCCC >Mature Secondary Structure MCNLLKIVLIATLLFLAGCDVDDASDATKYTKPTVNAGSDQYHTLPIDTITLHGSAKSWP CCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEECCCCCCCC KLVFSIKTKQWRQISGPQSLTILNADSFTATLLNPTVAGTYIFELYAKDSGDRANTDQVK CEEEEECCHHHHHCCCCCEEEEEECCCCEEEECCCCHHHEEEEEEEECCCCCCCCCCEEE IVLREPQPVVAARKSLGYEDDYQQLWQSVATNYPRYDQIQDEWQQLYQPYLIKAAQAQNE EEEECCCCHHHHHHHCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCH EQWRSLVEAMFTELSGPKLTTIQAPSAERWRANPTRALAVRGRQDNGIGLLEIGALHEQD HHHHHHHHHHHHHCCCCEEEEEECCCCHHCCCCCCEEEEEECCCCCCCEEEEECCCCCHH ALHDIGELHEIDALHDVSLADFTKQLDDALMQLKGVSEIRLEIRTPNALGEQALFTLLEK HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHH LTTRAALLCISPNKEASSCVSLPANSDLDGVALLINPTCEQTTCRILSEYLSYLHSGEQH HHHHEEEEEECCCCCCHHEEECCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHCCCCE FYYMPSPVLDSHWRLVMDPES EEECCCCCCCCCCEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA