Definition | Vibrio vulnificus YJ016 chromosome I, complete sequence. |
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Accession | NC_005139 |
Length | 3,354,505 |
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The map label for this gene is 37680591
Identifier: 37680591
GI number: 37680591
Start: 2437608
End: 2438642
Strand: Direct
Name: 37680591
Synonym: VV2407
Alternate gene names: NA
Gene position: 2437608-2438642 (Clockwise)
Preceding gene: 37680590
Following gene: 37680592
Centisome position: 72.67
GC content: 47.83
Gene sequence:
>1035_bases ATGGCTTTCAAACGTCATTCACAAGGAATTAGCATGCAAGTTTCCCCAACACGCGCGGCAATACTACTTAGTGCGATTGC TGCACTCGCCTCTTCATATAGCCTGGCAGAGCCGGACCCGTTTGATCCCGGATTCAGCGGCACCATCAGTATTAATATTG GATTTGGCCAAAGCCAATCACAAAACAACACTCATGAAGATAATGAAATCACCGCCGATCTCACCAACCAAGGCAAAAAG CTATCACAAGCGTCTCCATTTTTTCTTGGCCGATTGCAATACAGCTTTGGCGACACGTTAGTCTTTCTTGGCAATAGTGA AGAACAGATAGCAGAAGCGCAATTTCAAGCTGAACTGGGCGTTGCACATCGGTTCAACAACGCCATGATCCTCACTGCCG CACTCTTTGGGAATGTCCCTAGCATGGAAGAAGTCTGGCGTGACCCTTATCTCACTGGTCAAAAAAGGCAGACAACGGAG CAAACGGTCGGTGGCGTAAGATTCGCTATGGACATCACCAGCCCTTTGCCAATCAGTTTGAAATACGCTATCGCCAGCAG CGAAGTTGAATACGACGACATCGGCCTCTCACAAGGGTTAACTACTGAAGCTCGTTCACAATTAAAGCGTGCCAGCGACT ATCAACGCTTTGGCGCAGAGATCTCCTTTCCTTTGAGCCAGTCGTTTGTACTGTCCCCTGCGTTTTACTACACGCTGCGC GACGCCGATGGCGATGCCAAAAGCAATCAATTATTGACCGCACAGATGTCGTTTCTTATCGCCCAAGGCAGACACAGTGT TATCACAACACTGAGAAATAGCTCTGCCAGTTTTGATGCAGACAACCCCGTTTTTTCTCGCAAGCAAGATTACGAAAGCT TTGGTCTTTTTTCCGTCTACAGCTATGCCGATCTTTGGGGCTGGCGAAATACCCAACTGAACGTTATGGCGGGTTATCAA GAGTCGGATTCTGATATCGATTTTTACGACAGTGAAGAGGTCTTTCTCTCCACTGGCATTAGCTACAGTTTCTGA
Upstream 100 bases:
>100_bases GCTGCATCCGAATACTGCCGAGTCGGAATTGTGACCAAAATGGACACAATTCGTCCATAAAACACCAACGATTTATCGAT GTGGTGAATGCTAATTTGGA
Downstream 100 bases:
>100_bases TCCGGAGGACTTAAGATGTGTAACTTACTCAAAATCGTCTTAATAGCCACACTGCTGTTCCTCGCTGGGTGCGATGTTGA TGATGCCAGTGATGCCACCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 344; Mature: 343
Protein sequence:
>344_residues MAFKRHSQGISMQVSPTRAAILLSAIAALASSYSLAEPDPFDPGFSGTISINIGFGQSQSQNNTHEDNEITADLTNQGKK LSQASPFFLGRLQYSFGDTLVFLGNSEEQIAEAQFQAELGVAHRFNNAMILTAALFGNVPSMEEVWRDPYLTGQKRQTTE QTVGGVRFAMDITSPLPISLKYAIASSEVEYDDIGLSQGLTTEARSQLKRASDYQRFGAEISFPLSQSFVLSPAFYYTLR DADGDAKSNQLLTAQMSFLIAQGRHSVITTLRNSSASFDADNPVFSRKQDYESFGLFSVYSYADLWGWRNTQLNVMAGYQ ESDSDIDFYDSEEVFLSTGISYSF
Sequences:
>Translated_344_residues MAFKRHSQGISMQVSPTRAAILLSAIAALASSYSLAEPDPFDPGFSGTISINIGFGQSQSQNNTHEDNEITADLTNQGKK LSQASPFFLGRLQYSFGDTLVFLGNSEEQIAEAQFQAELGVAHRFNNAMILTAALFGNVPSMEEVWRDPYLTGQKRQTTE QTVGGVRFAMDITSPLPISLKYAIASSEVEYDDIGLSQGLTTEARSQLKRASDYQRFGAEISFPLSQSFVLSPAFYYTLR DADGDAKSNQLLTAQMSFLIAQGRHSVITTLRNSSASFDADNPVFSRKQDYESFGLFSVYSYADLWGWRNTQLNVMAGYQ ESDSDIDFYDSEEVFLSTGISYSF >Mature_343_residues AFKRHSQGISMQVSPTRAAILLSAIAALASSYSLAEPDPFDPGFSGTISINIGFGQSQSQNNTHEDNEITADLTNQGKKL SQASPFFLGRLQYSFGDTLVFLGNSEEQIAEAQFQAELGVAHRFNNAMILTAALFGNVPSMEEVWRDPYLTGQKRQTTEQ TVGGVRFAMDITSPLPISLKYAIASSEVEYDDIGLSQGLTTEARSQLKRASDYQRFGAEISFPLSQSFVLSPAFYYTLRD ADGDAKSNQLLTAQMSFLIAQGRHSVITTLRNSSASFDADNPVFSRKQDYESFGLFSVYSYADLWGWRNTQLNVMAGYQE SDSDIDFYDSEEVFLSTGISYSF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37980; Mature: 37849
Theoretical pI: Translated: 4.36; Mature: 4.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAFKRHSQGISMQVSPTRAAILLSAIAALASSYSLAEPDPFDPGFSGTISINIGFGQSQS CCCCCCCCCCEEEECCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEECCCCCC QNNTHEDNEITADLTNQGKKLSQASPFFLGRLQYSFGDTLVFLGNSEEQIAEAQFQAELG CCCCCCCCCEEEEHHHCCCCCCCCCCEEEEEEEECCCCEEEEECCCHHHHHHHHHHHHHH VAHRFNNAMILTAALFGNVPSMEEVWRDPYLTGQKRQTTEQTVGGVRFAMDITSPLPISL HHHHCCCEEEEEEEHHCCCCCHHHHHCCCCCCCCCCCCHHHHHCCEEEEEECCCCCCEEE KYAIASSEVEYDDIGLSQGLTTEARSQLKRASDYQRFGAEISFPLSQSFVLSPAFYYTLR EEEEECCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHCCEEECCCCCCEEECCEEEEEEE DADGDAKSNQLLTAQMSFLIAQGRHSVITTLRNSSASFDADNPVFSRKQDYESFGLFSVY CCCCCCCCCCEEHHHHHHHHHCCCHHEEHEECCCCCCCCCCCCCCCCCCCHHHCCHHHHH SYADLWGWRNTQLNVMAGYQESDSDIDFYDSEEVFLSTGISYSF HHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCEEEECCCCCCC >Mature Secondary Structure AFKRHSQGISMQVSPTRAAILLSAIAALASSYSLAEPDPFDPGFSGTISINIGFGQSQS CCCCCCCCCEEEECCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEECCCCCC QNNTHEDNEITADLTNQGKKLSQASPFFLGRLQYSFGDTLVFLGNSEEQIAEAQFQAELG CCCCCCCCCEEEEHHHCCCCCCCCCCEEEEEEEECCCCEEEEECCCHHHHHHHHHHHHHH VAHRFNNAMILTAALFGNVPSMEEVWRDPYLTGQKRQTTEQTVGGVRFAMDITSPLPISL HHHHCCCEEEEEEEHHCCCCCHHHHHCCCCCCCCCCCCHHHHHCCEEEEEECCCCCCEEE KYAIASSEVEYDDIGLSQGLTTEARSQLKRASDYQRFGAEISFPLSQSFVLSPAFYYTLR EEEEECCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHCCEEECCCCCCEEECCEEEEEEE DADGDAKSNQLLTAQMSFLIAQGRHSVITTLRNSSASFDADNPVFSRKQDYESFGLFSVY CCCCCCCCCCEEHHHHHHHHHCCCHHEEHEECCCCCCCCCCCCCCCCCCCHHHCCHHHHH SYADLWGWRNTQLNVMAGYQESDSDIDFYDSEEVFLSTGISYSF HHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA