Definition | Vibrio vulnificus YJ016 chromosome I, complete sequence. |
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Accession | NC_005139 |
Length | 3,354,505 |
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The map label for this gene is 37680560
Identifier: 37680560
GI number: 37680560
Start: 2406823
End: 2407983
Strand: Direct
Name: 37680560
Synonym: VV2376
Alternate gene names: NA
Gene position: 2406823-2407983 (Clockwise)
Preceding gene: 37680559
Following gene: 37680564
Centisome position: 71.75
GC content: 48.75
Gene sequence:
>1161_bases ATGGCTGTACACGTTGGTATCATTGATCAGGACCCTGTCAGACTGGTGACTCCTCTCCTCGATCTGCGTACCGTCAGCAC TCATATCGTGTTTATCGGTGATGAGTCTCAACGCGATATGTATCAAAGACTTCATTCTGTGCTTGCTCAGCGTGATATCA CTTCCGAACTGTTTGTCATCCCCTCTGTCGTCGATACTCGTTTGATCAAACAATCTATTCAGGCCTTAGCTGAAGATCTC AAAAGCCGTGGGGAAGATGTCAAACTGAACGCCAGTTGTGGCCTGCGTCATCGCCTTCTTTCTGTTTATGAGGTATTCCG CACTTACCATTGGCCAATTTTTGTGGTGGAACCAAACAGCGACAAACTGTGCTGGCTCTATCCTGATGGCCGTGAAGACA CTCAAGTACAAGATCGCATTACCGTTGCTGATTATCTCACTATCTTTGGTGCGCGCGGTGAGTTCAATGAGGTCGAACTG CCACCTCAACTTGACCAAAAATTGCATGAACTCGGCGAGCGTTGGGCCAGTCACGCTTTGGAATTAGGCCCTGGTTTGGC GACTTTAAACTATCTCGCCACGACCTGCCGCAAAGAGCAAAAGCTGGATGTAGAGTTATCTGAAAAGCAGCAAGGCTATC GCGAGCTGAATATGCTGCTGGCAGATTTGGTGGAAGCGCAGATCGCCACTTACGAAAACGGCATTCTTACCTTTGCCAAT GAAGACGCTCGTCGTTTCTCCAATGGCGAATGGTTAGAGACACTGGTTCACAGCACCGTCAAACAGATCCAAGATGACAT GCCCACCATTCAAGACCACTCGCTCAATGTTCAGGTCTATCGTCAACTTGGTGAGCGCGAAGTGCGTAATGAGCTTGATG TCGCCTCTGTGGTTAACAATAAACTGCACATCATTGAATGTAAGACGAAGGGCATGCGTGATGACGGCGACGATACGCTT TATAAGCTTGAATCACTGCGTGACCTACTCGGTGGCCTACAAGCAAGAGCCATGTTGGTAAGCTTCCGTCCACTGCGTCA CAACGATATTACCCGTGCAGAGGATCTTGGCTTAGCGCTGATCGGCCCTGATGAATTGAAAGATTTGAAAAAGCATCTCA CAGAGTGGTTTGCACAAGCAGGTGGTAGCGACGGGATCTAA
Upstream 100 bases:
>100_bases GCCCTTGTTTTTTATGCGCTGTGTCTACATATGAAGATCAGGCGCTTGCACTCTCTTTCACATCCTCATTTTTTGCAAGC CGTACTGAGAAGGAAATGTT
Downstream 100 bases:
>100_bases TTCCCGTCTTGCTTGGAGGGGCTTAAAAGACCAATTGCTTTTTCAACCGACAAACAAAAACCCCGAAGCGATTGCCTCGG GGTTTCTTCATTCAATCAGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 386; Mature: 385
Protein sequence:
>386_residues MAVHVGIIDQDPVRLVTPLLDLRTVSTHIVFIGDESQRDMYQRLHSVLAQRDITSELFVIPSVVDTRLIKQSIQALAEDL KSRGEDVKLNASCGLRHRLLSVYEVFRTYHWPIFVVEPNSDKLCWLYPDGREDTQVQDRITVADYLTIFGARGEFNEVEL PPQLDQKLHELGERWASHALELGPGLATLNYLATTCRKEQKLDVELSEKQQGYRELNMLLADLVEAQIATYENGILTFAN EDARRFSNGEWLETLVHSTVKQIQDDMPTIQDHSLNVQVYRQLGEREVRNELDVASVVNNKLHIIECKTKGMRDDGDDTL YKLESLRDLLGGLQARAMLVSFRPLRHNDITRAEDLGLALIGPDELKDLKKHLTEWFAQAGGSDGI
Sequences:
>Translated_386_residues MAVHVGIIDQDPVRLVTPLLDLRTVSTHIVFIGDESQRDMYQRLHSVLAQRDITSELFVIPSVVDTRLIKQSIQALAEDL KSRGEDVKLNASCGLRHRLLSVYEVFRTYHWPIFVVEPNSDKLCWLYPDGREDTQVQDRITVADYLTIFGARGEFNEVEL PPQLDQKLHELGERWASHALELGPGLATLNYLATTCRKEQKLDVELSEKQQGYRELNMLLADLVEAQIATYENGILTFAN EDARRFSNGEWLETLVHSTVKQIQDDMPTIQDHSLNVQVYRQLGEREVRNELDVASVVNNKLHIIECKTKGMRDDGDDTL YKLESLRDLLGGLQARAMLVSFRPLRHNDITRAEDLGLALIGPDELKDLKKHLTEWFAQAGGSDGI >Mature_385_residues AVHVGIIDQDPVRLVTPLLDLRTVSTHIVFIGDESQRDMYQRLHSVLAQRDITSELFVIPSVVDTRLIKQSIQALAEDLK SRGEDVKLNASCGLRHRLLSVYEVFRTYHWPIFVVEPNSDKLCWLYPDGREDTQVQDRITVADYLTIFGARGEFNEVELP PQLDQKLHELGERWASHALELGPGLATLNYLATTCRKEQKLDVELSEKQQGYRELNMLLADLVEAQIATYENGILTFANE DARRFSNGEWLETLVHSTVKQIQDDMPTIQDHSLNVQVYRQLGEREVRNELDVASVVNNKLHIIECKTKGMRDDGDDTLY KLESLRDLLGGLQARAMLVSFRPLRHNDITRAEDLGLALIGPDELKDLKKHLTEWFAQAGGSDGI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43922; Mature: 43791
Theoretical pI: Translated: 4.88; Mature: 4.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAVHVGIIDQDPVRLVTPLLDLRTVSTHIVFIGDESQRDMYQRLHSVLAQRDITSELFVI CEEEEEECCCCCHHHHHHHHHHEEEEEEEEEECCCCHHHHHHHHHHHHHHHCCCHHHEEH PSVVDTRLIKQSIQALAEDLKSRGEDVKLNASCGLRHRLLSVYEVFRTYHWPIFVVEPNS HHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHCCEEEEEECCC DKLCWLYPDGREDTQVQDRITVADYLTIFGARGEFNEVELPPQLDQKLHELGERWASHAL CCEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH ELGPGLATLNYLATTCRKEQKLDVELSEKQQGYRELNMLLADLVEAQIATYENGILTFAN HHCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEC EDARRFSNGEWLETLVHSTVKQIQDDMPTIQDHSLNVQVYRQLGEREVRNELDVASVVNN CHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC KLHIIECKTKGMRDDGDDTLYKLESLRDLLGGLQARAMLVSFRPLRHNDITRAEDLGLAL CEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCEEE IGPDELKDLKKHLTEWFAQAGGSDGI ECHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure AVHVGIIDQDPVRLVTPLLDLRTVSTHIVFIGDESQRDMYQRLHSVLAQRDITSELFVI EEEEEECCCCCHHHHHHHHHHEEEEEEEEEECCCCHHHHHHHHHHHHHHHCCCHHHEEH PSVVDTRLIKQSIQALAEDLKSRGEDVKLNASCGLRHRLLSVYEVFRTYHWPIFVVEPNS HHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHCCEEEEEECCC DKLCWLYPDGREDTQVQDRITVADYLTIFGARGEFNEVELPPQLDQKLHELGERWASHAL CCEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH ELGPGLATLNYLATTCRKEQKLDVELSEKQQGYRELNMLLADLVEAQIATYENGILTFAN HHCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEC EDARRFSNGEWLETLVHSTVKQIQDDMPTIQDHSLNVQVYRQLGEREVRNELDVASVVNN CHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC KLHIIECKTKGMRDDGDDTLYKLESLRDLLGGLQARAMLVSFRPLRHNDITRAEDLGLAL CEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCEEE IGPDELKDLKKHLTEWFAQAGGSDGI ECHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA