Definition | Vibrio vulnificus YJ016 chromosome I, complete sequence. |
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Accession | NC_005139 |
Length | 3,354,505 |
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The map label for this gene is 37680550
Identifier: 37680550
GI number: 37680550
Start: 2396753
End: 2397520
Strand: Direct
Name: 37680550
Synonym: VV2366
Alternate gene names: NA
Gene position: 2396753-2397520 (Clockwise)
Preceding gene: 37680549
Following gene: 37680551
Centisome position: 71.45
GC content: 47.66
Gene sequence:
>768_bases ATGAGATTTCTCATTCCTCTGTTACTACTCTGTGTTTCAATGCCTTCTTGGGCACAGAGACAATTTGATGTTGAAGTGAT CATCTTTAAACGCGCCGTAGATGCAGAGCAAACTAATGAGTCCTGGCCGAATCAATTGCCAGAGATCACCATGACTTATG CCGGCGATTTTCAGGATGCCCAGTTCCGCCAGAGCAAAGGGGTTTCTATGCTGCCTTACTCTAGCTACCAGCTGTTATCG CAGAAAGAAGCGCTAGAGAAGCATGCCGGCTTCCAAGTGTTGCTGCACAAAGCGTGGCGTCAAGGTGACCGAGGAAAAGG TTCAGCGCCGATCTTCCGTATTCGCGCAGGAAAAGACTACTCAAAAGAGTACAACCCAGACGGTTCTGAAAAACAGGCCG CTGTGCAAGCACCGTTAGATGGCATTACAGAAGTGAGCATCGACAACCCTCTTTACGAGTTAGACGGCACGCTACAGGTT TATGTTCAGCATTATCTTTTCATCGAAACCGCATTGGATCTTAAAGAGCCAAGCGTGCGTGAAATTACGCTAGAGGCCAC ACCGCTTGAAGAAAATGCAGAGCAGTTAGGCCAAGTTGATGGTAATGTTCAGTTGGGTAACTTAACCGAAGTCACTCCAA CGGTGACGGTCGAGCAGTTCTTAAAGAGCTATCGAATGGATCAAAAACGTCGTATGCGTAGTGGTGAAACTCACTACCTC GACCACCCACTGCTTGGAATAGTGATTCAAGTGCGTCGCGTAGAATAA
Upstream 100 bases:
>100_bases TTTAGCGTACCATTGACGGACAGACGCCAACGTATTCAGTTTATCCAAGATTTGCTGAATGAGTTTAACCAGAATTTATT ACCAGTGAGCTAGTTATTCC
Downstream 100 bases:
>100_bases CCTCTACTCGCCCTTTGCTCATAAGCCCTCGACTGTGTCGGGGGCTTTGTTTTTCTCAACCAATTCACAAAGTCATCATT TATACTTTACTCAAATGCCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 255; Mature: 255
Protein sequence:
>255_residues MRFLIPLLLLCVSMPSWAQRQFDVEVIIFKRAVDAEQTNESWPNQLPEITMTYAGDFQDAQFRQSKGVSMLPYSSYQLLS QKEALEKHAGFQVLLHKAWRQGDRGKGSAPIFRIRAGKDYSKEYNPDGSEKQAAVQAPLDGITEVSIDNPLYELDGTLQV YVQHYLFIETALDLKEPSVREITLEATPLEENAEQLGQVDGNVQLGNLTEVTPTVTVEQFLKSYRMDQKRRMRSGETHYL DHPLLGIVIQVRRVE
Sequences:
>Translated_255_residues MRFLIPLLLLCVSMPSWAQRQFDVEVIIFKRAVDAEQTNESWPNQLPEITMTYAGDFQDAQFRQSKGVSMLPYSSYQLLS QKEALEKHAGFQVLLHKAWRQGDRGKGSAPIFRIRAGKDYSKEYNPDGSEKQAAVQAPLDGITEVSIDNPLYELDGTLQV YVQHYLFIETALDLKEPSVREITLEATPLEENAEQLGQVDGNVQLGNLTEVTPTVTVEQFLKSYRMDQKRRMRSGETHYL DHPLLGIVIQVRRVE >Mature_255_residues MRFLIPLLLLCVSMPSWAQRQFDVEVIIFKRAVDAEQTNESWPNQLPEITMTYAGDFQDAQFRQSKGVSMLPYSSYQLLS QKEALEKHAGFQVLLHKAWRQGDRGKGSAPIFRIRAGKDYSKEYNPDGSEKQAAVQAPLDGITEVSIDNPLYELDGTLQV YVQHYLFIETALDLKEPSVREITLEATPLEENAEQLGQVDGNVQLGNLTEVTPTVTVEQFLKSYRMDQKRRMRSGETHYL DHPLLGIVIQVRRVE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29088; Mature: 29088
Theoretical pI: Translated: 5.04; Mature: 5.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRFLIPLLLLCVSMPSWAQRQFDVEVIIFKRAVDAEQTNESWPNQLPEITMTYAGDFQDA CCHHHHHHHHHCCCCCHHHHHCCEEEEEEEECCCCHHCCCCCCCCCCCEEEEECCCCCCH QFRQSKGVSMLPYSSYQLLSQKEALEKHAGFQVLLHKAWRQGDRGKGSAPIFRIRAGKDY HHHHHCCCEECCCHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCEEEEECCCCC SKEYNPDGSEKQAAVQAPLDGITEVSIDNPLYELDGTLQVYVQHYLFIETALDLKEPSVR CCCCCCCCCHHHHHHHCCCCCCEEEECCCCHHHHCCHHHHHHHHHHHHHHHHCCCCCCCE EITLEATPLEENAEQLGQVDGNVQLGNLTEVTPTVTVEQFLKSYRMDQKRRMRSGETHYL EEEEECCCCHHHHHHHHCCCCCEEECCCCCCCCHHHHHHHHHHHCCCHHHHHHCCCCEEC DHPLLGIVIQVRRVE CCCHHHHEEEEEECC >Mature Secondary Structure MRFLIPLLLLCVSMPSWAQRQFDVEVIIFKRAVDAEQTNESWPNQLPEITMTYAGDFQDA CCHHHHHHHHHCCCCCHHHHHCCEEEEEEEECCCCHHCCCCCCCCCCCEEEEECCCCCCH QFRQSKGVSMLPYSSYQLLSQKEALEKHAGFQVLLHKAWRQGDRGKGSAPIFRIRAGKDY HHHHHCCCEECCCHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCEEEEECCCCC SKEYNPDGSEKQAAVQAPLDGITEVSIDNPLYELDGTLQVYVQHYLFIETALDLKEPSVR CCCCCCCCCHHHHHHHCCCCCCEEEECCCCHHHHCCHHHHHHHHHHHHHHHHCCCCCCCE EITLEATPLEENAEQLGQVDGNVQLGNLTEVTPTVTVEQFLKSYRMDQKRRMRSGETHYL EEEEECCCCHHHHHHHHCCCCCEEECCCCCCCCHHHHHHHHHHHCCCHHHHHHCCCCEEC DHPLLGIVIQVRRVE CCCHHHHEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA