Definition | Vibrio vulnificus YJ016 chromosome I, complete sequence. |
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Accession | NC_005139 |
Length | 3,354,505 |
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The map label for this gene is ydaF [H]
Identifier: 37680551
GI number: 37680551
Start: 2397635
End: 2398183
Strand: Direct
Name: ydaF [H]
Synonym: VV2367
Alternate gene names: 37680551
Gene position: 2397635-2398183 (Clockwise)
Preceding gene: 37680550
Following gene: 37680559
Centisome position: 71.48
GC content: 47.54
Gene sequence:
>549_bases ATGAGTCCCGATTTCCATATCGTAACCCAACGAGTGATCTTACGTTTAATCGAAGCCGAGCGTGCGAGTGAGTTGGCGAA GTTAATTCGTCGTTCAACCTCTCTCCATCAATGGATCGATTGGTGTCACCCGAATTACAGCGAAAAAGAAGCGCAAAGCT TTCTTCTCATGACCCGATTGAACTGGGTGAAAGCTGACGCGTATGGGTTTGGCATATTTCTCAAAGACAGTGACGAGCTG GTTGGCATGGTGGCCATCAATGAGCTTTACCACACCTTCAACATGGCCAGTCTCGGTTATTGGATCGCCGACGATCATCA GCGCCAAGGGCTAGCCAAAGAAGCCATGTGGGCGCTGGCGGAGTTTTGCTTTGCCAAACTCAAACTAACCCGATTGGAAA TTGTGTGCGCAATTGATAACCAAGCTAGCCAGAAACTGATTGAATCTTGCCATGCCAAACAAGAGACCATCGCCCGTAAT CGCTTTGTTTTCCACGACAAACCACAAGATGGTGTGGTCTATTCATTGATTCCCCAAGATATGCATTAA
Upstream 100 bases:
>100_bases TTGCTCATAAGCCCTCGACTGTGTCGGGGGCTTTGTTTTTCTCAACCAATTCACAAAGTCATCATTTATACTTTACTCAA ATGCCTATAACGGAACTGCC
Downstream 100 bases:
>100_bases TACCGACACGAATGGGAGAAATATCAGCCATTAAAAAAGGAGCTCGTTGGCTCCTTTTGGGTCAGTTCGTCACTTCGTAT TTCAATTAGTGAAGTTTCAA
Product: putative ribosomal-protein-serine acetyltransferase
Products: CoA; Ribosomal-Protein N-Acetyl-L-Serine. [C]
Alternate protein names: NA
Number of amino acids: Translated: 182; Mature: 181
Protein sequence:
>182_residues MSPDFHIVTQRVILRLIEAERASELAKLIRRSTSLHQWIDWCHPNYSEKEAQSFLLMTRLNWVKADAYGFGIFLKDSDEL VGMVAINELYHTFNMASLGYWIADDHQRQGLAKEAMWALAEFCFAKLKLTRLEIVCAIDNQASQKLIESCHAKQETIARN RFVFHDKPQDGVVYSLIPQDMH
Sequences:
>Translated_182_residues MSPDFHIVTQRVILRLIEAERASELAKLIRRSTSLHQWIDWCHPNYSEKEAQSFLLMTRLNWVKADAYGFGIFLKDSDEL VGMVAINELYHTFNMASLGYWIADDHQRQGLAKEAMWALAEFCFAKLKLTRLEIVCAIDNQASQKLIESCHAKQETIARN RFVFHDKPQDGVVYSLIPQDMH >Mature_181_residues SPDFHIVTQRVILRLIEAERASELAKLIRRSTSLHQWIDWCHPNYSEKEAQSFLLMTRLNWVKADAYGFGIFLKDSDELV GMVAINELYHTFNMASLGYWIADDHQRQGLAKEAMWALAEFCFAKLKLTRLEIVCAIDNQASQKLIESCHAKQETIARNR FVFHDKPQDGVVYSLIPQDMH
Specific function: Putative N-acetyltransferase. May act on ribosomal proteins (Potential) [H]
COG id: COG1670
COG function: function code J; Acetyltransferases, including N-acetylases of ribosomal proteins
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 N-acetyltransferase domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000182 - InterPro: IPR016181 [H]
Pfam domain/function: PF00583 Acetyltransf_1 [H]
EC number: 2.3.1.- [C]
Molecular weight: Translated: 21100; Mature: 20968
Theoretical pI: Translated: 6.71; Mature: 6.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSPDFHIVTQRVILRLIEAERASELAKLIRRSTSLHQWIDWCHPNYSEKEAQSFLLMTRL CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCHHHHHHHHHHHHH NWVKADAYGFGIFLKDSDELVGMVAINELYHTFNMASLGYWIADDHQRQGLAKEAMWALA HHHEECCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCEECCCHHHCCHHHHHHHHHH EFCFAKLKLTRLEIVCAIDNQASQKLIESCHAKQETIARNRFVFHDKPQDGVVYSLIPQD HHHHHHHHHHHEEEEEEECCHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEEEECCCC MH CC >Mature Secondary Structure SPDFHIVTQRVILRLIEAERASELAKLIRRSTSLHQWIDWCHPNYSEKEAQSFLLMTRL CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCHHHHHHHHHHHHH NWVKADAYGFGIFLKDSDELVGMVAINELYHTFNMASLGYWIADDHQRQGLAKEAMWALA HHHEECCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCEECCCHHHCCHHHHHHHHHH EFCFAKLKLTRLEIVCAIDNQASQKLIESCHAKQETIARNRFVFHDKPQDGVVYSLIPQD HHHHHHHHHHHEEEEEEECCHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEEEECCCC MH CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Acetyl-CoA; Ribosomal-Protein L-Serine [C]
Specific reaction: Acetyl-CoA + Ribosomal-Protein L-Serine = CoA + Ribosomal-Protein N-Acetyl-L-Serine. [C]
General reaction: Transferases; Acyltransferases; Transferring groups other than amino-acyl groups [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]