The gene/protein map for NC_005139 is currently unavailable.
Definition Vibrio vulnificus YJ016 chromosome I, complete sequence.
Accession NC_005139
Length 3,354,505

Click here to switch to the map view.

The map label for this gene is 37680525

Identifier: 37680525

GI number: 37680525

Start: 2366870

End: 2368417

Strand: Direct

Name: 37680525

Synonym: VV2341

Alternate gene names: NA

Gene position: 2366870-2368417 (Clockwise)

Preceding gene: 37680518

Following gene: 37680526

Centisome position: 70.56

GC content: 47.67

Gene sequence:

>1548_bases
ATGTCAGACGCAGTGAATAAAGTGCATTCTGATTCAGATATTGAAACGAAGAGCTACAGTGAGCTTCATCGTCCAGCTTC
TGAATTTGCCAGCCGCTCAGACTACCTAGACCACGAACTGCAAATTATGAAACCGCGCCGTTTCGGTTTGAACCTTCCTG
GTCGTGACTTCCGTTTTGAACTTGAGGACCTTGTTCCTGCGCTTGCTGGTACTATCGGTATTATCGCGATGTACTCTGCA
GTAATGATGTCTTGGGCAGACGGTCTAACCCAAGCTTGGGACCACATCAATTTAGGTAAAGAATTTGCTATCGAAGTGGC
GCGTGTGGAAATGTTGTTCCCAGCGTTATTCTTCTGTGTTATCGCATCTGGCTTTGTGAACCCACGAGCTAACTTAGCCG
GTAACCACGGTCCAATGATCCCTCTTATCGGCGCGATTGCTCTCGCTGGTGCTCACCCTCTTGCATTGGCACTTCTACTT
GGCGTGTTTGGTCTCCTACTGAGCTACTTTAAAGGTGGTTCTAAACTGGTGAACCTGACCTCCGAAGGTACCGCAGGTGG
CTTGTTGATCTTCCTCGGCTTTACCGGGACGATGAGCCAAATTACCTCCATTCAAGAATGGGCCGTTGGCCTGCAATCTG
CTGACGTTGCAGCTGGCAGCCTAGGCTACATTGGTTTGGTTGTGCTTGGCATTAACATCGTTATTTACGCACTGCTTGCT
AAACTCAACCTACGTTGGCTAGCAATCCCAGTATGTGCGTTTACTGGCTTGGTGATTGCACTTGCGCTAGGTGCAGGTTT
TGATCTTAAGTTCGAAACGGAAATGGGCCTACCTAACCTGAACCCAGTTTACTGGTGGGGCAGCACTGAGACTGGTTGGC
AACTTGGCCTACCAACGCTACAACACTTTATCGCTTCTCTACCATTTGCGATTCTAGCGGTAGCAATGTGGTCTCCAGAT
TTCCTTGGTCACCGTATTTTCCAAGAATTGAACTATCCTAAGAAGACAGAAAAAGTGCTGATGGATGTCGATGACACCAT
GACCATGTGTTCTATTCGTCAAATGGTGGGTACTGCACTTGGTGGCGGTAACATCACATCATCTTGGGGTACATACATGA
TCCCAGCTGCGATTGCGAAGCGTCCAATCCCTGGTGGTGCGATCATCCTAGGCTGTTTGGTTATGACGATTGCGATTCTT
GGCTTCCCAATGGATGTCGCGGTATGGCCACCAGTAATGCGTTGTGCGCTATTAGTAGGTGTATTCTTGCCTCTACTTGA
AGCCGGTATGCAGATGGTTCGTAGCACAAAAGATTCGCAAGCAGCGGGTATCTGTATCTTTGGTTCTGCGGTTGTGAACC
CAGTTCTAGCTTGGGCATTGACCATGCTACTAGATAATAATGGTCTGATTGGTGACAAAGAGCGCGCATCTAAACTATCT
TTTGTCGATAAAGTAGTGATTCCAGGTGGTGTTCTTATTATCTGTCTAGTTGCTATGCTTGCAGTTGGTATGCTAGAAAG
CCAATACGGCATCAAAGCTTGGCTATAA

Upstream 100 bases:

>100_bases
AACCCTAACACCTAGCATCGGCTATAACAGGAAAAACCCGCAGGATGCGGATCATAGAATTCAGATCGAATTACTAACTT
TTTAAATATATGAGGAATCT

Downstream 100 bases:

>100_bases
GCTTTCAAAAAAAGTTTGGGTGGTGCTGGTCACCACCCAAATTTTATTGAGTTTTTTTAGCTTTTATTGATTTAGTTTAA
GGTTTGCAAAAAAATTTTAG

Product: hypothetical protein

Products: NA

Alternate protein names: Xanthine/Uracil/Vitamin C Permease; Permease Family Protein

Number of amino acids: Translated: 515; Mature: 514

Protein sequence:

>515_residues
MSDAVNKVHSDSDIETKSYSELHRPASEFASRSDYLDHELQIMKPRRFGLNLPGRDFRFELEDLVPALAGTIGIIAMYSA
VMMSWADGLTQAWDHINLGKEFAIEVARVEMLFPALFFCVIASGFVNPRANLAGNHGPMIPLIGAIALAGAHPLALALLL
GVFGLLLSYFKGGSKLVNLTSEGTAGGLLIFLGFTGTMSQITSIQEWAVGLQSADVAAGSLGYIGLVVLGINIVIYALLA
KLNLRWLAIPVCAFTGLVIALALGAGFDLKFETEMGLPNLNPVYWWGSTETGWQLGLPTLQHFIASLPFAILAVAMWSPD
FLGHRIFQELNYPKKTEKVLMDVDDTMTMCSIRQMVGTALGGGNITSSWGTYMIPAAIAKRPIPGGAIILGCLVMTIAIL
GFPMDVAVWPPVMRCALLVGVFLPLLEAGMQMVRSTKDSQAAGICIFGSAVVNPVLAWALTMLLDNNGLIGDKERASKLS
FVDKVVIPGGVLIICLVAMLAVGMLESQYGIKAWL

Sequences:

>Translated_515_residues
MSDAVNKVHSDSDIETKSYSELHRPASEFASRSDYLDHELQIMKPRRFGLNLPGRDFRFELEDLVPALAGTIGIIAMYSA
VMMSWADGLTQAWDHINLGKEFAIEVARVEMLFPALFFCVIASGFVNPRANLAGNHGPMIPLIGAIALAGAHPLALALLL
GVFGLLLSYFKGGSKLVNLTSEGTAGGLLIFLGFTGTMSQITSIQEWAVGLQSADVAAGSLGYIGLVVLGINIVIYALLA
KLNLRWLAIPVCAFTGLVIALALGAGFDLKFETEMGLPNLNPVYWWGSTETGWQLGLPTLQHFIASLPFAILAVAMWSPD
FLGHRIFQELNYPKKTEKVLMDVDDTMTMCSIRQMVGTALGGGNITSSWGTYMIPAAIAKRPIPGGAIILGCLVMTIAIL
GFPMDVAVWPPVMRCALLVGVFLPLLEAGMQMVRSTKDSQAAGICIFGSAVVNPVLAWALTMLLDNNGLIGDKERASKLS
FVDKVVIPGGVLIICLVAMLAVGMLESQYGIKAWL
>Mature_514_residues
SDAVNKVHSDSDIETKSYSELHRPASEFASRSDYLDHELQIMKPRRFGLNLPGRDFRFELEDLVPALAGTIGIIAMYSAV
MMSWADGLTQAWDHINLGKEFAIEVARVEMLFPALFFCVIASGFVNPRANLAGNHGPMIPLIGAIALAGAHPLALALLLG
VFGLLLSYFKGGSKLVNLTSEGTAGGLLIFLGFTGTMSQITSIQEWAVGLQSADVAAGSLGYIGLVVLGINIVIYALLAK
LNLRWLAIPVCAFTGLVIALALGAGFDLKFETEMGLPNLNPVYWWGSTETGWQLGLPTLQHFIASLPFAILAVAMWSPDF
LGHRIFQELNYPKKTEKVLMDVDDTMTMCSIRQMVGTALGGGNITSSWGTYMIPAAIAKRPIPGGAIILGCLVMTIAILG
FPMDVAVWPPVMRCALLVGVFLPLLEAGMQMVRSTKDSQAAGICIFGSAVVNPVLAWALTMLLDNNGLIGDKERASKLSF
VDKVVIPGGVLIICLVAMLAVGMLESQYGIKAWL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 55249; Mature: 55118

Theoretical pI: Translated: 5.87; Mature: 5.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDAVNKVHSDSDIETKSYSELHRPASEFASRSDYLDHELQIMKPRRFGLNLPGRDFRFE
CCCHHHHHCCCCCCCHHHHHHHHCCHHHHHHHHCCCCCHHHEECCHHCCCCCCCCCCEEE
LEDLVPALAGTIGIIAMYSAVMMSWADGLTQAWDHINLGKEFAIEVARVEMLFPALFFCV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
IASGFVNPRANLAGNHGPMIPLIGAIALAGAHPLALALLLGVFGLLLSYFKGGSKLVNLT
HHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEC
SEGTAGGLLIFLGFTGTMSQITSIQEWAVGLQSADVAAGSLGYIGLVVLGINIVIYALLA
CCCCCCCEEEEEECCCHHHHHHHHHHHHHHHCCCHHCCCCHHHHHHHHHHHHHHHHHHHH
KLNLRWLAIPVCAFTGLVIALALGAGFDLKFETEMGLPNLNPVYWWGSTETGWQLGLPTL
HCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCEEEECCCCCCCCCCHHHH
QHFIASLPFAILAVAMWSPDFLGHRIFQELNYPKKTEKVLMDVDDTMTMCSIRQMVGTAL
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHC
GGGNITSSWGTYMIPAAIAKRPIPGGAIILGCLVMTIAILGFPMDVAVWPPVMRCALLVG
CCCCCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCHHHCCHHHHHHHHHH
VFLPLLEAGMQMVRSTKDSQAAGICIFGSAVVNPVLAWALTMLLDNNGLIGDKERASKLS
HHHHHHHHHHHHHHCCCCCCCCCEEEECHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHH
FVDKVVIPGGVLIICLVAMLAVGMLESQYGIKAWL
HHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
SDAVNKVHSDSDIETKSYSELHRPASEFASRSDYLDHELQIMKPRRFGLNLPGRDFRFE
CCHHHHHCCCCCCCHHHHHHHHCCHHHHHHHHCCCCCHHHEECCHHCCCCCCCCCCEEE
LEDLVPALAGTIGIIAMYSAVMMSWADGLTQAWDHINLGKEFAIEVARVEMLFPALFFCV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
IASGFVNPRANLAGNHGPMIPLIGAIALAGAHPLALALLLGVFGLLLSYFKGGSKLVNLT
HHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEC
SEGTAGGLLIFLGFTGTMSQITSIQEWAVGLQSADVAAGSLGYIGLVVLGINIVIYALLA
CCCCCCCEEEEEECCCHHHHHHHHHHHHHHHCCCHHCCCCHHHHHHHHHHHHHHHHHHHH
KLNLRWLAIPVCAFTGLVIALALGAGFDLKFETEMGLPNLNPVYWWGSTETGWQLGLPTL
HCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCEEEECCCCCCCCCCHHHH
QHFIASLPFAILAVAMWSPDFLGHRIFQELNYPKKTEKVLMDVDDTMTMCSIRQMVGTAL
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHC
GGGNITSSWGTYMIPAAIAKRPIPGGAIILGCLVMTIAILGFPMDVAVWPPVMRCALLVG
CCCCCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCHHHCCHHHHHHHHHH
VFLPLLEAGMQMVRSTKDSQAAGICIFGSAVVNPVLAWALTMLLDNNGLIGDKERASKLS
HHHHHHHHHHHHHHCCCCCCCCCEEEECHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHH
FVDKVVIPGGVLIICLVAMLAVGMLESQYGIKAWL
HHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA