Definition | Vibrio vulnificus YJ016 chromosome I, complete sequence. |
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Accession | NC_005139 |
Length | 3,354,505 |
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The map label for this gene is yciN [H]
Identifier: 37680500
GI number: 37680500
Start: 2337108
End: 2337356
Strand: Direct
Name: yciN [H]
Synonym: VV2316
Alternate gene names: 37680500
Gene position: 2337108-2337356 (Clockwise)
Preceding gene: 37680493
Following gene: 37680504
Centisome position: 69.67
GC content: 39.76
Gene sequence:
>249_bases ATGAGTGATAAGAAATCCATTTCTGAATTTGAACTGCTATTAATTGCCAACCACATCATCCAAGAGCATGACGATTATAT AGAGGGAATGAGAGCAACCAGCGTCGAAGAAAAAGATGACGTGCTGGTGTTTAAAGGGGAATATTTCTTAGACCATAACG GACTACCAACAGCCAAAACTACGTCGGTTTTCAACATGTTTAAGTACCTCGCGCACCATTTGTCGAAAGAGTTTACTCTC GACAAATAA
Upstream 100 bases:
>100_bases CAACCGTCTGCTTTTTGTCTCGAATTCTTTAATAGCGATTGAATTCGCCCGTCAAGACTCTAGACTATCGCTCGTAAATC ATAGTAAAGGCACTAAGAAA
Downstream 100 bases:
>100_bases TCTTCCCACTGATACGCCAACATTTCCATAAACGAGTTGGCGTTGAAGTTAGCCGGCAAGCGAGTAAATCTCCATCAGCA TAGATTTACTATGTACCAAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 82; Mature: 81
Protein sequence:
>82_residues MSDKKSISEFELLLIANHIIQEHDDYIEGMRATSVEEKDDVLVFKGEYFLDHNGLPTAKTTSVFNMFKYLAHHLSKEFTL DK
Sequences:
>Translated_82_residues MSDKKSISEFELLLIANHIIQEHDDYIEGMRATSVEEKDDVLVFKGEYFLDHNGLPTAKTTSVFNMFKYLAHHLSKEFTL DK >Mature_81_residues SDKKSISEFELLLIANHIIQEHDDYIEGMRATSVEEKDDVLVFKGEYFLDHNGLPTAKTTSVFNMFKYLAHHLSKEFTLD K
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1787528, Length=78, Percent_Identity=53.8461538461538, Blast_Score=87, Evalue=2e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR019633 [H]
Pfam domain/function: PF10692 DUF2498 [H]
EC number: NA
Molecular weight: Translated: 9522; Mature: 9391
Theoretical pI: Translated: 5.09; Mature: 5.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDKKSISEFELLLIANHIIQEHDDYIEGMRATSVEEKDDVLVFKGEYFLDHNGLPTAKT CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCEEECCCCCCCCHH TSVFNMFKYLAHHLSKEFTLDK HHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure SDKKSISEFELLLIANHIIQEHDDYIEGMRATSVEEKDDVLVFKGEYFLDHNGLPTAKT CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCEEECCCCCCCCHH TSVFNMFKYLAHHLSKEFTLDK HHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]