Definition | Vibrio vulnificus YJ016 chromosome I, complete sequence. |
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Accession | NC_005139 |
Length | 3,354,505 |
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The map label for this gene is ate [H]
Identifier: 37680504
GI number: 37680504
Start: 2341420
End: 2342310
Strand: Direct
Name: ate [H]
Synonym: VV2320
Alternate gene names: 37680504
Gene position: 2341420-2342310 (Clockwise)
Preceding gene: 37680500
Following gene: 37680505
Centisome position: 69.8
GC content: 46.69
Gene sequence:
>891_bases ATGGTATTTTTGCCGTCATTTCAGCGAGCATGGTGGCAAGTTGATCGATTGCCAGGTGATGAATTCTCATTTGCACTCAT TGGGGGCTTTTACGTTGCCGAGAGAGGAATTTCTCCAACGGCTGCTATGCTTAAAACAACAGAGAGTAACGTCGGGTTGT TTCTCACCCCAATGGTTGAAGAGGCACAATGCATGAGTTCAGATATCCACCAAATTAAAATAGGGCTCACAGACAATCAT CCTTGCAGTTATTTGCCCGAGAGAAAAGAACGAGTCGCTGTGGCACTTGAGGCGGATATGCACACGGCTGACAATTATGA AGTTCTGTTGGCCAATGGATTTCGTCGCAGTGGCAATACCATCTACAAGCCTCATTGCGATAGCTGCCACTCATGCCAAC CCATTCGCATCTCCGTACCCGACATTGAACTTTCACGCAGCCAAAAGCGTTTGCTGGCCAAAGCACGCTCCCTTAGCTGG TCGATGAAGCGGAATATGGATGAAAACTGGTTCGATCTCTACAGTCGATACATTGTTGCTCGCCATCGTAACGGAACCAT GTATCCCCCGAAAAAAGATGACTTTGCTCACTTTTCTCGTAATCAATGGCTAACCACGCAGTTTCTCCACATTTATGAAG GACAACGCTTAATCGCTGTCGCAGTGACAGACATCATGGATCATTGCGCCAGTGCTTTTTACACCTTTTTCGAACCAGAA CATGAGCTATCTCTGGGGACACTGGCCGTGCTCTTTCAATTGGAATACTGTCAAGAAGAGAAAAAGCAGTGGCTCTATTT GGGCTATCAGATTGACGAGTGCCCAGCGATGAACTATAAAGTTCGCTTTCATCGCCACCAAAAACTAGTAAATCAGCGTT GGCAAGGGTAG
Upstream 100 bases:
>100_bases ATCAAAGACTCATTGGCGGTTTCTATGGCCTTAGCATAGGAGAATTGTTTTGTGGCGAATCGATGTTTAGCCTCGAAACC AACGCATCTAAAATTGCATT
Downstream 100 bases:
>100_bases AATACGCCCCAACTTTACTTTTTTACATTTTGACGGCTTATGTAACCGTCAAGATTCGCCAAGTTTCTAAGAGGATTAAA TGGCTAAAGAAGACGTAATT
Product: arginyl-tRNA-protein transferase
Products: NA
Alternate protein names: Arginyltransferase; R-transferase [H]
Number of amino acids: Translated: 296; Mature: 296
Protein sequence:
>296_residues MVFLPSFQRAWWQVDRLPGDEFSFALIGGFYVAERGISPTAAMLKTTESNVGLFLTPMVEEAQCMSSDIHQIKIGLTDNH PCSYLPERKERVAVALEADMHTADNYEVLLANGFRRSGNTIYKPHCDSCHSCQPIRISVPDIELSRSQKRLLAKARSLSW SMKRNMDENWFDLYSRYIVARHRNGTMYPPKKDDFAHFSRNQWLTTQFLHIYEGQRLIAVAVTDIMDHCASAFYTFFEPE HELSLGTLAVLFQLEYCQEEKKQWLYLGYQIDECPAMNYKVRFHRHQKLVNQRWQG
Sequences:
>Translated_296_residues MVFLPSFQRAWWQVDRLPGDEFSFALIGGFYVAERGISPTAAMLKTTESNVGLFLTPMVEEAQCMSSDIHQIKIGLTDNH PCSYLPERKERVAVALEADMHTADNYEVLLANGFRRSGNTIYKPHCDSCHSCQPIRISVPDIELSRSQKRLLAKARSLSW SMKRNMDENWFDLYSRYIVARHRNGTMYPPKKDDFAHFSRNQWLTTQFLHIYEGQRLIAVAVTDIMDHCASAFYTFFEPE HELSLGTLAVLFQLEYCQEEKKQWLYLGYQIDECPAMNYKVRFHRHQKLVNQRWQG >Mature_296_residues MVFLPSFQRAWWQVDRLPGDEFSFALIGGFYVAERGISPTAAMLKTTESNVGLFLTPMVEEAQCMSSDIHQIKIGLTDNH PCSYLPERKERVAVALEADMHTADNYEVLLANGFRRSGNTIYKPHCDSCHSCQPIRISVPDIELSRSQKRLLAKARSLSW SMKRNMDENWFDLYSRYIVARHRNGTMYPPKKDDFAHFSRNQWLTTQFLHIYEGQRLIAVAVTDIMDHCASAFYTFFEPE HELSLGTLAVLFQLEYCQEEKKQWLYLGYQIDECPAMNYKVRFHRHQKLVNQRWQG
Specific function: May conjugate Arg from its aminoacyl-tRNA to the N- termini of proteins containing an N-terminal aspartate or glutamate (Potential) [H]
COG id: COG2935
COG function: function code O; Putative arginyl-tRNA:protein arginylyltransferase
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the R-transferase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016181 - InterPro: IPR007472 - InterPro: IPR017138 - InterPro: IPR007471 [H]
Pfam domain/function: PF04377 ATE_C; PF04376 ATE_N [H]
EC number: =2.3.2.8 [H]
Molecular weight: Translated: 34535; Mature: 34535
Theoretical pI: Translated: 7.33; Mature: 7.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 6.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVFLPSFQRAWWQVDRLPGDEFSFALIGGFYVAERGISPTAAMLKTTESNVGLFLTPMVE CEECCCHHHHHHHHHCCCCCCCEEEEEHHHHHHHCCCCCHHHHHEECCCCCCEEEECCHH EAQCMSSDIHQIKIGLTDNHPCSYLPERKERVAVALEADMHTADNYEVLLANGFRRSGNT HHHHHHCCCEEEEEECCCCCCCCCCCCCCCEEEEEEECCCCCCCCEEEEEECCCCCCCCE IYKPHCDSCHSCQPIRISVPDIELSRSQKRLLAKARSLSWSMKRNMDENWFDLYSRYIVA EECCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHCCHHHHCCCCCHHHHHHHHHHEE RHRNGTMYPPKKDDFAHFSRNQWLTTQFLHIYEGQRLIAVAVTDIMDHCASAFYTFFEPE ECCCCCCCCCCCCCHHHHCCCCCHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHCCCC HELSLGTLAVLFQLEYCQEEKKQWLYLGYQIDECPAMNYKVRFHRHQKLVNQRWQG CCCCHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCEEEEHHHHHHHHHHCCCC >Mature Secondary Structure MVFLPSFQRAWWQVDRLPGDEFSFALIGGFYVAERGISPTAAMLKTTESNVGLFLTPMVE CEECCCHHHHHHHHHCCCCCCCEEEEEHHHHHHHCCCCCHHHHHEECCCCCCEEEECCHH EAQCMSSDIHQIKIGLTDNHPCSYLPERKERVAVALEADMHTADNYEVLLANGFRRSGNT HHHHHHCCCEEEEEECCCCCCCCCCCCCCCEEEEEEECCCCCCCCEEEEEECCCCCCCCE IYKPHCDSCHSCQPIRISVPDIELSRSQKRLLAKARSLSWSMKRNMDENWFDLYSRYIVA EECCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHCCHHHHCCCCCHHHHHHHHHHEE RHRNGTMYPPKKDDFAHFSRNQWLTTQFLHIYEGQRLIAVAVTDIMDHCASAFYTFFEPE ECCCCCCCCCCCCCHHHHCCCCCHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHCCCC HELSLGTLAVLFQLEYCQEEKKQWLYLGYQIDECPAMNYKVRFHRHQKLVNQRWQG CCCCHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCEEEEHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA