Definition | Vibrio vulnificus YJ016 chromosome I, complete sequence. |
---|---|
Accession | NC_005139 |
Length | 3,354,505 |
Click here to switch to the map view.
The map label for this gene is 37680478
Identifier: 37680478
GI number: 37680478
Start: 2310921
End: 2311913
Strand: Direct
Name: 37680478
Synonym: VV2294
Alternate gene names: NA
Gene position: 2310921-2311913 (Clockwise)
Preceding gene: 37680477
Following gene: 37680481
Centisome position: 68.89
GC content: 49.75
Gene sequence:
>993_bases ATGTTCTCCTTTTTGTCTAAGTACACATCACCGATGAAGCTGCGACGCAAAGGGATCATGGGGATGAATAAGCGTAACCA CGCTTATATTGGTCGCTATAACGACCGTTCCAAATACCCTTTGGTGGATGACAAGCTCAAAACCAAGATCATCGCGCAAC GTGCGGGCTGTACAGTGCCGCAGTTGATTGGTGTGATCAGCAATCAGGCCGATGTGAAGAACATTCACGAGATGGTAAAA ACGTGGCCCGGCTTTGTTATCAAACCCGCTCGTGGCAGTGGTGGCAAAGGTATCCTTGTCGTGACCTCGCACAAAGATGG CGTTTACACCAAACCTTCGGGTTCCACCATCAACAAAGAAGAGATCGAACGCCATATTTCTAATGCTCTAGCGGGGTTAT TCTCTCTTGGTGGAAAAAACGATGTCGCCGTGGTTGAGAACTTAATTAAGTTTGATAACTGCTTTGACGGCTTCAGCTTC GAAGGGGTGCCCGATGTGCGGATCATCGTATTCAAAGGCTACCCTGTGATGGCGATGATGCGTTGCTCAACGGCCGCGTC TGATGGAAAAGCCAACTTGCACCAAGGTGCGGTTGGGGTAGGTATTGATATTGCGACGGGGAAAGCGATTCGTGCCGTGC AGTTCAACCAACCTGTCACTCACCATCCAGATACAGGAAAAGATCTTGCCACTTTGCAAGTGCCTCATTGGCAACGTTTG TTGACCTTGGCAGCCAGTGCGTGGGAAATGACCGGACTGGGTTATCTCGGTACCGATATGGTGTTGGATAAAGAAGAAGG ACCAATGGTATTGGAACTCAACGCTCGCCCTGGTCTAGCGATTCAAATTGCCAACGGTGCGGGGCTTCTACCACGCTTAC ACCATATTGAGAACTTGGGCGCACCACTGGTCTATCCCTCAGCAGAAGAGCGTGTGGCGTATTCAATGCGTCAATTTGGC GCAAAACAAGATTTTGATAGCAGCGCAAGCTAG
Upstream 100 bases:
>100_bases TCAGCTTGTGGTACTGGCGGCAATTTTGCTATTGGGTACTTACACTGGATACCGCATTACAGAACTGCGCCGCTTTAAGC CATTGGTGGAGGATTAATCT
Downstream 100 bases:
>100_bases ATCAATTCTTGCGTCACTTATACGGTAAACGCCCGCGATGATTGCGGGCGTTTTCTTGTTGGCCATTTGAGCGCAGTGGC GTATTTTTATCCTAAAACGT
Product: hypothetical protein
Products: NA
Alternate protein names: Alpha-L-Glutamate Ligase; Alpha-L-Glutamate Ligase-Related Protein; Alpha-L-Glutamate Ligase Family Protein; Glutathione Synthase/Ribosomal; Glutathione Synthase/Ribosomal Protein; Ketopantoate Hydroxymethyltransferase; Glutathione Synthase/Ribosomal Glutaminyl Transferase; Alpha-L-Glutamate Ligase Homolog
Number of amino acids: Translated: 330; Mature: 330
Protein sequence:
>330_residues MFSFLSKYTSPMKLRRKGIMGMNKRNHAYIGRYNDRSKYPLVDDKLKTKIIAQRAGCTVPQLIGVISNQADVKNIHEMVK TWPGFVIKPARGSGGKGILVVTSHKDGVYTKPSGSTINKEEIERHISNALAGLFSLGGKNDVAVVENLIKFDNCFDGFSF EGVPDVRIIVFKGYPVMAMMRCSTAASDGKANLHQGAVGVGIDIATGKAIRAVQFNQPVTHHPDTGKDLATLQVPHWQRL LTLAASAWEMTGLGYLGTDMVLDKEEGPMVLELNARPGLAIQIANGAGLLPRLHHIENLGAPLVYPSAEERVAYSMRQFG AKQDFDSSAS
Sequences:
>Translated_330_residues MFSFLSKYTSPMKLRRKGIMGMNKRNHAYIGRYNDRSKYPLVDDKLKTKIIAQRAGCTVPQLIGVISNQADVKNIHEMVK TWPGFVIKPARGSGGKGILVVTSHKDGVYTKPSGSTINKEEIERHISNALAGLFSLGGKNDVAVVENLIKFDNCFDGFSF EGVPDVRIIVFKGYPVMAMMRCSTAASDGKANLHQGAVGVGIDIATGKAIRAVQFNQPVTHHPDTGKDLATLQVPHWQRL LTLAASAWEMTGLGYLGTDMVLDKEEGPMVLELNARPGLAIQIANGAGLLPRLHHIENLGAPLVYPSAEERVAYSMRQFG AKQDFDSSAS >Mature_330_residues MFSFLSKYTSPMKLRRKGIMGMNKRNHAYIGRYNDRSKYPLVDDKLKTKIIAQRAGCTVPQLIGVISNQADVKNIHEMVK TWPGFVIKPARGSGGKGILVVTSHKDGVYTKPSGSTINKEEIERHISNALAGLFSLGGKNDVAVVENLIKFDNCFDGFSF EGVPDVRIIVFKGYPVMAMMRCSTAASDGKANLHQGAVGVGIDIATGKAIRAVQFNQPVTHHPDTGKDLATLQVPHWQRL LTLAASAWEMTGLGYLGTDMVLDKEEGPMVLELNARPGLAIQIANGAGLLPRLHHIENLGAPLVYPSAEERVAYSMRQFG AKQDFDSSAS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35936; Mature: 35936
Theoretical pI: Translated: 9.81; Mature: 9.81
Prosite motif: PS50975 ATP_GRASP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFSFLSKYTSPMKLRRKGIMGMNKRNHAYIGRYNDRSKYPLVDDKLKTKIIAQRAGCTVP CCCHHHHCCCHHHHHHHCCCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHCCCCHH QLIGVISNQADVKNIHEMVKTWPGFVIKPARGSGGKGILVVTSHKDGVYTKPSGSTINKE HHHHHHCCCHHHHHHHHHHHHCCCEEEECCCCCCCCEEEEEEECCCCCEECCCCCCCCHH EIERHISNALAGLFSLGGKNDVAVVENLIKFDNCFDGFSFEGVPDVRIIVFKGYPVMAMM HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCHHHHH RCSTAASDGKANLHQGAVGVGIDIATGKAIRAVQFNQPVTHHPDTGKDLATLQVPHWQRL HHHCCCCCCCCCCCCCCEEEEEEECCCCEEEEEECCCCCCCCCCCCCCEEEEECCHHHHH LTLAASAWEMTGLGYLGTDMVLDKEEGPMVLELNARPGLAIQIANGAGLLPRLHHIENLG HHHHHHHHHHCCCCEECCCEEEECCCCCEEEEECCCCCEEEEECCCCCCCHHHHHHHHCC APLVYPSAEERVAYSMRQFGAKQDFDSSAS CCEECCCHHHHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure MFSFLSKYTSPMKLRRKGIMGMNKRNHAYIGRYNDRSKYPLVDDKLKTKIIAQRAGCTVP CCCHHHHCCCHHHHHHHCCCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHCCCCHH QLIGVISNQADVKNIHEMVKTWPGFVIKPARGSGGKGILVVTSHKDGVYTKPSGSTINKE HHHHHHCCCHHHHHHHHHHHHCCCEEEECCCCCCCCEEEEEEECCCCCEECCCCCCCCHH EIERHISNALAGLFSLGGKNDVAVVENLIKFDNCFDGFSFEGVPDVRIIVFKGYPVMAMM HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCHHHHH RCSTAASDGKANLHQGAVGVGIDIATGKAIRAVQFNQPVTHHPDTGKDLATLQVPHWQRL HHHCCCCCCCCCCCCCCEEEEEEECCCCEEEEEECCCCCCCCCCCCCCEEEEECCHHHHH LTLAASAWEMTGLGYLGTDMVLDKEEGPMVLELNARPGLAIQIANGAGLLPRLHHIENLG HHHHHHHHHHCCCCEECCCEEEECCCCCEEEEECCCCCEEEEECCCCCCCHHHHHHHHCC APLVYPSAEERVAYSMRQFGAKQDFDSSAS CCEECCCHHHHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA