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The map label for this gene is cmoA [H]

Identifier: 37680474

GI number: 37680474

Start: 2306713

End: 2307456

Strand: Direct

Name: cmoA [H]

Synonym: VV2290

Alternate gene names: 37680474

Gene position: 2306713-2307456 (Clockwise)

Preceding gene: 37680473

Following gene: 37680475

Centisome position: 68.76

GC content: 44.62

Gene sequence:

>744_bases
ATGGTTATGAACCCAAAAAGCAATCCAGATACTATTTTTTCGGCTCCAATCGATAAAATTGGGGATTTCACCTTCGATGA
ACGCGTGGCGGAAGTCTTTCCAGACATGATTCAACGTTCGGTTCCGGGTTACAGCAACATCATTTCTGCTATTGGTATGT
TGGCCGAACGTTTTGTCAAACCTCACAGTAATGTGTATGACTTAGGTTGCTCACTGGGCGCAGCCACACTCTCAATGCGT
CGCCACATCAAACAAGAAGGCTGCCAGATCATTGCGGTCGATAATTCGAAAGCGATGGTTGAACGCTGCAAGCTTCACGT
CAATGCCTACCGCAGCGACACCCCCGTGAACGTGATTGAAGCCGATATTCGCAACATAGATATCGAAAACGCTTCCGTGG
TGGTTCTGAACTTTACTTTGCAATTCTTATCACCAGAAGATCGTTACGTATTGCTGGAAAAAATCTACGCAGGTTTACGT
CCTGGCGGCATTTTGATCCTTTCCGAAAAGTACGTTTTTGAAGATCAAGTTTCTAATGAACTGTTGATTGACCTTCACCA
TGACTTCAAACGGGCAAATGGGTACAGTGAGCTAGAAATCAGCCAAAAACGCAGTGCGATTGAAAACGTGATGCGTCCAG
ATTCGAAGAAACAACACAAAGAGCGCTTCGCACAAATTGGATTCAGCAGCTACGATGTTTGGTTCCAATGCTTTAACTTT
GGATCGATGTTTGCGATTAAGTAG

Upstream 100 bases:

>100_bases
TCTAAGCCGTGTCTTGCAATGCATGACAGCTTGAGGAAATTCCCCTAAAATACGCGCCTTTTTACCGCCTATGTGAAAAC
AGGCAGTTTGTTAGCAGAGA

Downstream 100 bases:

>100_bases
CGAGAAGCGAGAAGCGAGAAGCGAGAAGCGAGAAGCGAGAAAGTCTTAACGTTTCGCATTTAGTGTCAATTTTTAATTTA
TTACTCAGTGAAAAACGATG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 247; Mature: 247

Protein sequence:

>247_residues
MVMNPKSNPDTIFSAPIDKIGDFTFDERVAEVFPDMIQRSVPGYSNIISAIGMLAERFVKPHSNVYDLGCSLGAATLSMR
RHIKQEGCQIIAVDNSKAMVERCKLHVNAYRSDTPVNVIEADIRNIDIENASVVVLNFTLQFLSPEDRYVLLEKIYAGLR
PGGILILSEKYVFEDQVSNELLIDLHHDFKRANGYSELEISQKRSAIENVMRPDSKKQHKERFAQIGFSSYDVWFQCFNF
GSMFAIK

Sequences:

>Translated_247_residues
MVMNPKSNPDTIFSAPIDKIGDFTFDERVAEVFPDMIQRSVPGYSNIISAIGMLAERFVKPHSNVYDLGCSLGAATLSMR
RHIKQEGCQIIAVDNSKAMVERCKLHVNAYRSDTPVNVIEADIRNIDIENASVVVLNFTLQFLSPEDRYVLLEKIYAGLR
PGGILILSEKYVFEDQVSNELLIDLHHDFKRANGYSELEISQKRSAIENVMRPDSKKQHKERFAQIGFSSYDVWFQCFNF
GSMFAIK
>Mature_247_residues
MVMNPKSNPDTIFSAPIDKIGDFTFDERVAEVFPDMIQRSVPGYSNIISAIGMLAERFVKPHSNVYDLGCSLGAATLSMR
RHIKQEGCQIIAVDNSKAMVERCKLHVNAYRSDTPVNVIEADIRNIDIENASVVVLNFTLQFLSPEDRYVLLEKIYAGLR
PGGILILSEKYVFEDQVSNELLIDLHHDFKRANGYSELEISQKRSAIENVMRPDSKKQHKERFAQIGFSSYDVWFQCFNF
GSMFAIK

Specific function: Catalyzes the conversion of 5-methoxyuridine (mo5U) to uridine-5-oxyacetic acid (cmo5U) at position 34 in tRNA. May also participate in the methylation of uridine-5-oxyacetic acid (cmo5U) to uridine-5-oxyacetic acid methyl ester (mcmo5U) [H]

COG id: COG0500

COG function: function code QR; SAM-dependent methyltransferases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily. CmoA family [H]

Homologues:

Organism=Escherichia coli, GI1788177, Length=241, Percent_Identity=69.7095435684647, Blast_Score=361, Evalue=1e-101,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013216
- InterPro:   IPR005271 [H]

Pfam domain/function: PF08241 Methyltransf_11 [H]

EC number: NA

Molecular weight: Translated: 28065; Mature: 28065

Theoretical pI: Translated: 6.25; Mature: 6.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVMNPKSNPDTIFSAPIDKIGDFTFDERVAEVFPDMIQRSVPGYSNIISAIGMLAERFVK
CCCCCCCCCCCEEECCHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHC
PHSNVYDLGCSLGAATLSMRRHIKQEGCQIIAVDNSKAMVERCKLHVNAYRSDTPVNVIE
CCCCHHHHCCHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHCCCCCCCHHHH
ADIRNIDIENASVVVLNFTLQFLSPEDRYVLLEKIYAGLRPGGILILSEKYVFEDQVSNE
HHHHCCCCCCCEEEEEEEEEEECCCCCCEEHHHHHHCCCCCCCEEEEECCHHHHHHCCCC
LLIDLHHDFKRANGYSELEISQKRSAIENVMRPDSKKQHKERFAQIGFSSYDVWFQCFNF
EEEEEHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHCC
GSMFAIK
CCEEEEC
>Mature Secondary Structure
MVMNPKSNPDTIFSAPIDKIGDFTFDERVAEVFPDMIQRSVPGYSNIISAIGMLAERFVK
CCCCCCCCCCCEEECCHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHC
PHSNVYDLGCSLGAATLSMRRHIKQEGCQIIAVDNSKAMVERCKLHVNAYRSDTPVNVIE
CCCCHHHHCCHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHCCCCCCCHHHH
ADIRNIDIENASVVVLNFTLQFLSPEDRYVLLEKIYAGLRPGGILILSEKYVFEDQVSNE
HHHHCCCCCCCEEEEEEEEEEECCCCCCEEHHHHHHCCCCCCCEEEEECCHHHHHHCCCC
LLIDLHHDFKRANGYSELEISQKRSAIENVMRPDSKKQHKERFAQIGFSSYDVWFQCFNF
EEEEEHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHCC
GSMFAIK
CCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA