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The map label for this gene is cmoB [H]

Identifier: 37680475

GI number: 37680475

Start: 2307554

End: 2308525

Strand: Direct

Name: cmoB [H]

Synonym: VV2291

Alternate gene names: 37680475

Gene position: 2307554-2308525 (Clockwise)

Preceding gene: 37680474

Following gene: 37680476

Centisome position: 68.79

GC content: 48.05

Gene sequence:

>972_bases
ATGTTTAATTTTGCTAATTTTTACCAGTTAATCGCTCAAGACACTCGTCTTCAGCCATGGCTCAACGTTCTACCTCAACA
GCTAACAGATTGGCAAAATGCTGAGCATGGTGATTTCCCTCGCTGGTTAAAAGCACTCAATAAGATCCCAGAAGGCGCAC
CCGATCAGATAGACATTAAGCACTCTGTCACCATTAGCAATGACACCCCGTTCCATCAAGGCGAGTTGAAGAAGCTTGAA
AGCTTGCTGCGTACTTTCCACCCTTGGCGCAAAGGCCCTTATACCGTTCACGGCATTCATATTGACACCGAATGGCGCAG
TGACTGGAAATGGGACCGTGTTCTACCTCATATTTCACCATTGAAAAATCGCAGCGTGCTGGATGTCGGCTGTGGCAATG
GTTATCACATGTGGCGCATGTTGGGTGAAGGCGCACGTCTGTGCGTGGGTATTGATCCATCACACCTGTTTTTAATTCAG
TTTGAAGCGATCCGTAAGTTAATGGGTGGCGATCAACGTGCACACCTGCTGCCATTGGGCATTGAACAGCTACCAAAGCT
TGAAGCGTTCGATACTGTTTTCAGTATGGGGGTGTTGTACCACCGTCGCTCTCCGCTTGATCACTTAATTCAACTGAAAG
ATCAGCTTGTCTCCGGCGGTGAATTGATTCTGGAAACCTTGGTGATTGAAGGGGATGAAACGGCAGTTTTGGTTCCCAAG
GAACGCTACGCTCAAATGCGCAATGTGTATTTCTTCCCTTCAGCTCGCGCTTTAAAAGTGTGGTTAGAATTGGTTGGCTT
TGAAGACGTGCGCATCGTGGACGAAAACGTCACCTCTGTCGACGAGCAACGCACCACCAATTGGATGACTCACAATTCAC
TGCCTGATTATCTCGATCAGAATGACCCGAGCAAAACGGTGGAAGGTTATCCAGCACCTCGCCGCGCAATTTTGGTGGCG
AAAAAGCCATAA

Upstream 100 bases:

>100_bases
TAGCGAGAAGCGAGAAGCGAGAAGCGAGAAGCGAGAAGCGAGAAAGTCTTAACGTTTCGCATTTAGTGTCAATTTTTAAT
TTATTACTCAGTGAAAAACG

Downstream 100 bases:

>100_bases
TTGACACGGTTTTGACTCAATAATTTGAGTATCACTAAACCCTAACAAGAGGATGCTTCACGCATCCTTTTTTATACGCT
ACACTCCTCTTTACAATAAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 323; Mature: 323

Protein sequence:

>323_residues
MFNFANFYQLIAQDTRLQPWLNVLPQQLTDWQNAEHGDFPRWLKALNKIPEGAPDQIDIKHSVTISNDTPFHQGELKKLE
SLLRTFHPWRKGPYTVHGIHIDTEWRSDWKWDRVLPHISPLKNRSVLDVGCGNGYHMWRMLGEGARLCVGIDPSHLFLIQ
FEAIRKLMGGDQRAHLLPLGIEQLPKLEAFDTVFSMGVLYHRRSPLDHLIQLKDQLVSGGELILETLVIEGDETAVLVPK
ERYAQMRNVYFFPSARALKVWLELVGFEDVRIVDENVTSVDEQRTTNWMTHNSLPDYLDQNDPSKTVEGYPAPRRAILVA
KKP

Sequences:

>Translated_323_residues
MFNFANFYQLIAQDTRLQPWLNVLPQQLTDWQNAEHGDFPRWLKALNKIPEGAPDQIDIKHSVTISNDTPFHQGELKKLE
SLLRTFHPWRKGPYTVHGIHIDTEWRSDWKWDRVLPHISPLKNRSVLDVGCGNGYHMWRMLGEGARLCVGIDPSHLFLIQ
FEAIRKLMGGDQRAHLLPLGIEQLPKLEAFDTVFSMGVLYHRRSPLDHLIQLKDQLVSGGELILETLVIEGDETAVLVPK
ERYAQMRNVYFFPSARALKVWLELVGFEDVRIVDENVTSVDEQRTTNWMTHNSLPDYLDQNDPSKTVEGYPAPRRAILVA
KKP
>Mature_323_residues
MFNFANFYQLIAQDTRLQPWLNVLPQQLTDWQNAEHGDFPRWLKALNKIPEGAPDQIDIKHSVTISNDTPFHQGELKKLE
SLLRTFHPWRKGPYTVHGIHIDTEWRSDWKWDRVLPHISPLKNRSVLDVGCGNGYHMWRMLGEGARLCVGIDPSHLFLIQ
FEAIRKLMGGDQRAHLLPLGIEQLPKLEAFDTVFSMGVLYHRRSPLDHLIQLKDQLVSGGELILETLVIEGDETAVLVPK
ERYAQMRNVYFFPSARALKVWLELVGFEDVRIVDENVTSVDEQRTTNWMTHNSLPDYLDQNDPSKTVEGYPAPRRAILVA
KKP

Specific function: Catalyzes the conversion of 5-hydroxyuridine (ho5U) to 5-methoxyuridine (mo5U) at position 34 in tRNA [H]

COG id: COG0500

COG function: function code QR; SAM-dependent methyltransferases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily. CmoB family [H]

Homologues:

Organism=Escherichia coli, GI1788178, Length=324, Percent_Identity=64.1975308641975, Blast_Score=446, Evalue=1e-127,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010017 [H]

Pfam domain/function: PF08003 Methyltransf_9 [H]

EC number: NA

Molecular weight: Translated: 37271; Mature: 37271

Theoretical pI: Translated: 6.71; Mature: 6.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFNFANFYQLIAQDTRLQPWLNVLPQQLTDWQNAEHGDFPRWLKALNKIPEGAPDQIDIK
CCCHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCEEEE
HSVTISNDTPFHQGELKKLESLLRTFHPWRKGPYTVHGIHIDTEWRSDWKWDRVLPHISP
EEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEEEEECCCCCCCCHHHHCCCCCC
LKNRSVLDVGCGNGYHMWRMLGEGARLCVGIDPSHLFLIQFEAIRKLMGGDQRAHLLPLG
CCCCCEEEECCCCCHHHHHHHCCCCEEEEECCCCEEEEEEHHHHHHHHCCCCCEEEEECC
IEQLPKLEAFDTVFSMGVLYHRRSPLDHLIQLKDQLVSGGELILETLVIEGDETAVLVPK
HHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHEEHHHEECCCCCEEEECH
ERYAQMRNVYFFPSARALKVWLELVGFEDVRIVDENVTSVDEQRTTNWMTHNSLPDYLDQ
HHHHHHHCEEECCCHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHCCCCCCCCCCHHHCC
NDPSKTVEGYPAPRRAILVAKKP
CCCCCCCCCCCCCCEEEEEEECC
>Mature Secondary Structure
MFNFANFYQLIAQDTRLQPWLNVLPQQLTDWQNAEHGDFPRWLKALNKIPEGAPDQIDIK
CCCHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCEEEE
HSVTISNDTPFHQGELKKLESLLRTFHPWRKGPYTVHGIHIDTEWRSDWKWDRVLPHISP
EEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEEEEECCCCCCCCHHHHCCCCCC
LKNRSVLDVGCGNGYHMWRMLGEGARLCVGIDPSHLFLIQFEAIRKLMGGDQRAHLLPLG
CCCCCEEEECCCCCHHHHHHHCCCCEEEEECCCCEEEEEEHHHHHHHHCCCCCEEEEECC
IEQLPKLEAFDTVFSMGVLYHRRSPLDHLIQLKDQLVSGGELILETLVIEGDETAVLVPK
HHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHEEHHHEECCCCCEEEECH
ERYAQMRNVYFFPSARALKVWLELVGFEDVRIVDENVTSVDEQRTTNWMTHNSLPDYLDQ
HHHHHHHCEEECCCHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHCCCCCCCCCCHHHCC
NDPSKTVEGYPAPRRAILVAKKP
CCCCCCCCCCCCCCEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA