Click here to switch to the map view.

The map label for this gene is 37680442

Identifier: 37680442

GI number: 37680442

Start: 2276620

End: 2278101

Strand: Direct

Name: 37680442

Synonym: VV2258

Alternate gene names: NA

Gene position: 2276620-2278101 (Clockwise)

Preceding gene: 37680441

Following gene: 37680444

Centisome position: 67.87

GC content: 44.87

Gene sequence:

>1482_bases
ATGAAACACAAAACGATAAAAACGTCCTTGAGCATATCTGGATTATTACTACTCACCGCATGTGGCGGTGGTAGCGGTAG
TAACGGAGGTAGTACTAATCCAAGTGCGTCTGCCAAAGTTGGCGGCCTAGCGATTGATGGTTATGTTGAAGGTGCTACTG
CATTCCTCGACTACAACTTCAATGGTGTGATGGATGAGGATGAACCTCGTGACATCACTGATCAAAACGGACGCTTCGAT
TTTACGATTGAAGAAGATGACATAATCTGTAAAGAGTACTCGCCAATTATCGTCGATGTACCTGCTGGTGCATACGATAG
CGATTATGGGTTAGTTGATAAGCCTTATCGCTTAACCTTTCCGCCCTCATTCTCATCTGACAACGTCGGCGAAGATGTAT
TTGCTACGACTCCATTCACTACAGTGATTTGGTCAGCGGTTGAATCTGACCTACTACAAAGTGGTGTAAGCAACTGTAAA
GAGTTGGCTGCTAATACTGAAGCACAAAACAAAGTTGCACGTCTAGTCGCCGAGAAGGAATACGAGTTGGGTAACCGCTA
CAACATTCCTGCTAACGAGCTATACGCAGACTTCATCGCTTCTGGTAACACCGAGCAGCATCAACTAGCCCAGCTTCTAA
CCAGCGGTCTAGCAAAAGGCTATGCTGAAACTTCAACTCTAGTCGATGCGAACCCTAACGCTTGGAAAGCTACAGTTGAG
TACTACGTTGAGAAAGACGACGCAGGTAATTTCACCAAGTGGTATCGTGAAGAACGCGTGTTTGATGCCGACACACATTC
TCTACGTATATTTGAAGTATCGGCTGACCTAGAAACTGTAGGCCGTCTCATCGTTTACCGTAACAAAATCAAAGCCGAAG
AAGGCGCGATGCAAAAATACACTGATGACCTAATCGACTACCTGCCAGAAATCAGCAAATACGGTTGTGGTTTAACTAAT
GATTACGTACAGAACTCAAAAGACTACGGCAACGACACCGTTACATTCTCTGTATCAGCTTCTGTTCTAGTTGACGACCA
TACTGCATGTGCTAATCCACTCGTATACTCTTCTAGCGTACCTTACGCTAACGTCATTCGTGAATTGAAAAACGGCAATG
TGTTACTACAAGCTGGTATGTGGGGTTTTGACTTTGGTGACAATGCTGTTATCGATGACCTAATCAACGATGGTTTGTAC
TCTAACATCACAAACCCAACAGTGCTGGACCAGTTCTCAACTTGGAACTACTCACTGGACTCAACTGAATCTTACGGTGC
ATCACGTTGGACACGTACATCAGTTGTAAGTACAGCTGAGAAAAATGTCATCACAGACGTGAACAGCAAAGGTATCTGGA
TTGTACGTACAACTTACCCTAACGGCACTCACCAAACGCAGTGTGGGGACTCTCTAGATACTTTAGTGGGCGTGGCTCAT
ATGGGTATGTGTGAAGAACTGCCCATAGTGCCTGCTAACTAA

Upstream 100 bases:

>100_bases
TCGATGAGGTTGTGTCTGCGTATCTAACCACTTTTGCTTATCACTATCCCAACAATTTTTCACTTAGCAACACTCCCCTT
TCTAAGAAGGAACTCACACC

Downstream 100 bases:

>100_bases
TCATAACGAGTTGAGAGGGGGTGTCTCCCCTCTCTTTTTTTTATTTTATTGAGCAACCAAAGTTTCTGTTTCCAGTACCA
AATTGCTTGGTGCGTACTTT

Product: hypothetical protein

Products: NA

Alternate protein names: PKD Domain-Containing Protein

Number of amino acids: Translated: 493; Mature: 493

Protein sequence:

>493_residues
MKHKTIKTSLSISGLLLLTACGGGSGSNGGSTNPSASAKVGGLAIDGYVEGATAFLDYNFNGVMDEDEPRDITDQNGRFD
FTIEEDDIICKEYSPIIVDVPAGAYDSDYGLVDKPYRLTFPPSFSSDNVGEDVFATTPFTTVIWSAVESDLLQSGVSNCK
ELAANTEAQNKVARLVAEKEYELGNRYNIPANELYADFIASGNTEQHQLAQLLTSGLAKGYAETSTLVDANPNAWKATVE
YYVEKDDAGNFTKWYREERVFDADTHSLRIFEVSADLETVGRLIVYRNKIKAEEGAMQKYTDDLIDYLPEISKYGCGLTN
DYVQNSKDYGNDTVTFSVSASVLVDDHTACANPLVYSSSVPYANVIRELKNGNVLLQAGMWGFDFGDNAVIDDLINDGLY
SNITNPTVLDQFSTWNYSLDSTESYGASRWTRTSVVSTAEKNVITDVNSKGIWIVRTTYPNGTHQTQCGDSLDTLVGVAH
MGMCEELPIVPAN

Sequences:

>Translated_493_residues
MKHKTIKTSLSISGLLLLTACGGGSGSNGGSTNPSASAKVGGLAIDGYVEGATAFLDYNFNGVMDEDEPRDITDQNGRFD
FTIEEDDIICKEYSPIIVDVPAGAYDSDYGLVDKPYRLTFPPSFSSDNVGEDVFATTPFTTVIWSAVESDLLQSGVSNCK
ELAANTEAQNKVARLVAEKEYELGNRYNIPANELYADFIASGNTEQHQLAQLLTSGLAKGYAETSTLVDANPNAWKATVE
YYVEKDDAGNFTKWYREERVFDADTHSLRIFEVSADLETVGRLIVYRNKIKAEEGAMQKYTDDLIDYLPEISKYGCGLTN
DYVQNSKDYGNDTVTFSVSASVLVDDHTACANPLVYSSSVPYANVIRELKNGNVLLQAGMWGFDFGDNAVIDDLINDGLY
SNITNPTVLDQFSTWNYSLDSTESYGASRWTRTSVVSTAEKNVITDVNSKGIWIVRTTYPNGTHQTQCGDSLDTLVGVAH
MGMCEELPIVPAN
>Mature_493_residues
MKHKTIKTSLSISGLLLLTACGGGSGSNGGSTNPSASAKVGGLAIDGYVEGATAFLDYNFNGVMDEDEPRDITDQNGRFD
FTIEEDDIICKEYSPIIVDVPAGAYDSDYGLVDKPYRLTFPPSFSSDNVGEDVFATTPFTTVIWSAVESDLLQSGVSNCK
ELAANTEAQNKVARLVAEKEYELGNRYNIPANELYADFIASGNTEQHQLAQLLTSGLAKGYAETSTLVDANPNAWKATVE
YYVEKDDAGNFTKWYREERVFDADTHSLRIFEVSADLETVGRLIVYRNKIKAEEGAMQKYTDDLIDYLPEISKYGCGLTN
DYVQNSKDYGNDTVTFSVSASVLVDDHTACANPLVYSSSVPYANVIRELKNGNVLLQAGMWGFDFGDNAVIDDLINDGLY
SNITNPTVLDQFSTWNYSLDSTESYGASRWTRTSVVSTAEKNVITDVNSKGIWIVRTTYPNGTHQTQCGDSLDTLVGVAH
MGMCEELPIVPAN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 53874; Mature: 53874

Theoretical pI: Translated: 4.13; Mature: 4.13

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKHKTIKTSLSISGLLLLTACGGGSGSNGGSTNPSASAKVGGLAIDGYVEGATAFLDYNF
CCCCEEEEECCCCEEEEEEEECCCCCCCCCCCCCCCCCEECCEEEECEECCEEEEEEECC
NGVMDEDEPRDITDQNGRFDFTIEEDDIICKEYSPIIVDVPAGAYDSDYGLVDKPYRLTF
CCCCCCCCCCCCCCCCCEEEEEECCCCEEEECCCCEEEECCCCCCCCCCCCCCCCEEEEC
PPSFSSDNVGEDVFATTPFTTVIWSAVESDLLQSGVSNCKELAANTEAQNKVARLVAEKE
CCCCCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
YELGNRYNIPANELYADFIASGNTEQHQLAQLLTSGLAKGYAETSTLVDANPNAWKATVE
HHCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCEEEECCCCCEEEEEE
YYVEKDDAGNFTKWYREERVFDADTHSLRIFEVSADLETVGRLIVYRNKIKAEEGAMQKY
EEEECCCCCCHHHHHHHHCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHCCHHHHHHHH
TDDLIDYLPEISKYGCGLTNDYVQNSKDYGNDTVTFSVSASVLVDDHTACANPLVYSSSV
HHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCEEEEEEEEEEEEECCCHHCCCEEEECCC
PYANVIRELKNGNVLLQAGMWGFDFGDNAVIDDLINDGLYSNITNPTVLDQFSTWNYSLD
CHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHHHCCCHHHCCCCCHHCCCCCCCCCCCC
STESYGASRWTRTSVVSTAEKNVITDVNSKGIWIVRTTYPNGTHQTQCGDSLDTLVGVAH
CCCCCCCCCCHHHHHHHHHHCCCEEECCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHH
MGMCEELPIVPAN
CCCHHCCCCCCCC
>Mature Secondary Structure
MKHKTIKTSLSISGLLLLTACGGGSGSNGGSTNPSASAKVGGLAIDGYVEGATAFLDYNF
CCCCEEEEECCCCEEEEEEEECCCCCCCCCCCCCCCCCEECCEEEECEECCEEEEEEECC
NGVMDEDEPRDITDQNGRFDFTIEEDDIICKEYSPIIVDVPAGAYDSDYGLVDKPYRLTF
CCCCCCCCCCCCCCCCCEEEEEECCCCEEEECCCCEEEECCCCCCCCCCCCCCCCEEEEC
PPSFSSDNVGEDVFATTPFTTVIWSAVESDLLQSGVSNCKELAANTEAQNKVARLVAEKE
CCCCCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
YELGNRYNIPANELYADFIASGNTEQHQLAQLLTSGLAKGYAETSTLVDANPNAWKATVE
HHCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCEEEECCCCCEEEEEE
YYVEKDDAGNFTKWYREERVFDADTHSLRIFEVSADLETVGRLIVYRNKIKAEEGAMQKY
EEEECCCCCCHHHHHHHHCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHCCHHHHHHHH
TDDLIDYLPEISKYGCGLTNDYVQNSKDYGNDTVTFSVSASVLVDDHTACANPLVYSSSV
HHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCEEEEEEEEEEEEECCCHHCCCEEEECCC
PYANVIRELKNGNVLLQAGMWGFDFGDNAVIDDLINDGLYSNITNPTVLDQFSTWNYSLD
CHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHHHCCCHHHCCCCCHHCCCCCCCCCCCC
STESYGASRWTRTSVVSTAEKNVITDVNSKGIWIVRTTYPNGTHQTQCGDSLDTLVGVAH
CCCCCCCCCCHHHHHHHHHHCCCEEECCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHH
MGMCEELPIVPAN
CCCHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA