Definition | Vibrio vulnificus YJ016 chromosome I, complete sequence. |
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Accession | NC_005139 |
Length | 3,354,505 |
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The map label for this gene is 37680441
Identifier: 37680441
GI number: 37680441
Start: 2275925
End: 2276623
Strand: Direct
Name: 37680441
Synonym: VV2257
Alternate gene names: NA
Gene position: 2275925-2276623 (Clockwise)
Preceding gene: 37680440
Following gene: 37680442
Centisome position: 67.85
GC content: 44.35
Gene sequence:
>699_bases ATGTCTCCAACAGTGAATCGGCGCAGTGCTGAGCATCTCGAACTCATCTTTGAAATTTACTCTCTCATTCCAACCACACG TAAAATCACCGCTCGTGAGATCCAGCAAGCACTCTCTGACAAAGGAGTAATCAGAACGAAACGAACTGTACAGCGCTATC TTGATAGCCTGCTGAACTATTTCGACATAGAGCAAGATACACGAAGCCAACCTTATGGCTATCGCCGTACAGCGAATTCA AAACTGGCTTTAGGTCCCCGTGAACACATGGTGTTTTTGTGGGCTGAAGCCTACTTAAAATCACTCTTACCACGTACTTA CCATCGCATGGTGGATAGTGCTTTCGCACCTTTTAGCACTCTGAGTACGAAGCGAAAACTGATCGATGTTCGGCTGCCAG TCACTACTTACTCCAACGAAACAAACAGTATGGTTTTTGAAACCTTATGTACTGCCGTGTTTTACCAACGTGAAGTTAGG TTATCACTCATAAACCTACCTAAGAGCCTGTATGTCAACCCGTTGGGATTTATCGTGGAGCAAGGCCATTTTTACCTTGC ATACCAATATCAAGCCACTTTTCACGTGGTCCTCATCGATGAGGTTGTGTCTGCGTATCTAACCACTTTTGCTTATCACT ATCCCAACAATTTTTCACTTAGCAACACTCCCCTTTCTAAGAAGGAACTCACACCATGA
Upstream 100 bases:
>100_bases CTCTGGACTGTGTGGCCACCAGTCCTTCCATTTTTCCCGCTATCTCTCCAAGCATTGATGTCTTGGGGCCAGATAAGTGT GCTTAAAATTTGGTGGTCCT
Downstream 100 bases:
>100_bases AACACAAAACGATAAAAACGTCCTTGAGCATATCTGGATTATTACTACTCACCGCATGTGGCGGTGGTAGCGGTAGTAAC GGAGGTAGTACTAATCCAAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 232; Mature: 231
Protein sequence:
>232_residues MSPTVNRRSAEHLELIFEIYSLIPTTRKITAREIQQALSDKGVIRTKRTVQRYLDSLLNYFDIEQDTRSQPYGYRRTANS KLALGPREHMVFLWAEAYLKSLLPRTYHRMVDSAFAPFSTLSTKRKLIDVRLPVTTYSNETNSMVFETLCTAVFYQREVR LSLINLPKSLYVNPLGFIVEQGHFYLAYQYQATFHVVLIDEVVSAYLTTFAYHYPNNFSLSNTPLSKKELTP
Sequences:
>Translated_232_residues MSPTVNRRSAEHLELIFEIYSLIPTTRKITAREIQQALSDKGVIRTKRTVQRYLDSLLNYFDIEQDTRSQPYGYRRTANS KLALGPREHMVFLWAEAYLKSLLPRTYHRMVDSAFAPFSTLSTKRKLIDVRLPVTTYSNETNSMVFETLCTAVFYQREVR LSLINLPKSLYVNPLGFIVEQGHFYLAYQYQATFHVVLIDEVVSAYLTTFAYHYPNNFSLSNTPLSKKELTP >Mature_231_residues SPTVNRRSAEHLELIFEIYSLIPTTRKITAREIQQALSDKGVIRTKRTVQRYLDSLLNYFDIEQDTRSQPYGYRRTANSK LALGPREHMVFLWAEAYLKSLLPRTYHRMVDSAFAPFSTLSTKRKLIDVRLPVTTYSNETNSMVFETLCTAVFYQREVRL SLINLPKSLYVNPLGFIVEQGHFYLAYQYQATFHVVLIDEVVSAYLTTFAYHYPNNFSLSNTPLSKKELTP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26970; Mature: 26839
Theoretical pI: Translated: 9.68; Mature: 9.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSPTVNRRSAEHLELIFEIYSLIPTTRKITAREIQQALSDKGVIRTKRTVQRYLDSLLNY CCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH FDIEQDTRSQPYGYRRTANSKLALGPREHMVFLWAEAYLKSLLPRTYHRMVDSAFAPFST HCCCCCCCCCCCCCEECCCCEEEECCHHHEEEHHHHHHHHHHHHHHHHHHHHHHCCCHHH LSTKRKLIDVRLPVTTYSNETNSMVFETLCTAVFYQREVRLSLINLPKSLYVNPLGFIVE HHHHHHEEEEEECEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCHHHHHEE QGHFYLAYQYQATFHVVLIDEVVSAYLTTFAYHYPNNFSLSNTPLSKKELTP CCCEEEEEEECCEEEEEEHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure SPTVNRRSAEHLELIFEIYSLIPTTRKITAREIQQALSDKGVIRTKRTVQRYLDSLLNY CCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH FDIEQDTRSQPYGYRRTANSKLALGPREHMVFLWAEAYLKSLLPRTYHRMVDSAFAPFST HCCCCCCCCCCCCCEECCCCEEEECCHHHEEEHHHHHHHHHHHHHHHHHHHHHHCCCHHH LSTKRKLIDVRLPVTTYSNETNSMVFETLCTAVFYQREVRLSLINLPKSLYVNPLGFIVE HHHHHHEEEEEECEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCHHHHHEE QGHFYLAYQYQATFHVVLIDEVVSAYLTTFAYHYPNNFSLSNTPLSKKELTP CCCEEEEEEECCEEEEEEHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA