Definition | Vibrio vulnificus YJ016 chromosome I, complete sequence. |
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Accession | NC_005139 |
Length | 3,354,505 |
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The map label for this gene is 37680402
Identifier: 37680402
GI number: 37680402
Start: 2235864
End: 2236619
Strand: Direct
Name: 37680402
Synonym: VV2218
Alternate gene names: NA
Gene position: 2235864-2236619 (Clockwise)
Preceding gene: 37680399
Following gene: 37680403
Centisome position: 66.65
GC content: 27.12
Gene sequence:
>756_bases ATGGAAAATTATTCAATACAAAACAATGAAGATACATTCCTTATTAGAAATAGAAACGAATCAATATATATAGAATTTGT TCTTCAAGCGATTTACAACCCATCAAGCAAGGAAATAAAATATTATGAGATATTATCTAGAATAATAAGCTCTTCAGGTG AAAATTATAACAATGAAGACTTTTTTGAGAACATAGATGACACTTTTTTGAAAATGATCGCCATATGTCAGTTAAAAGAG GCTAAAAGATTAAGTATTAATAAGCCTATTTCTATTAATTTAACACTATCTTGCTTACTTGATACCGATTTCATAAACGA ACTAATAGATAGGAAAAATATTGAATTGGCAATTGAGATTAATGATATAAATTCTAATTTTGACTGCGATTTATTATTTG AAAACATTAAAAAGTTACAAAGAAGCAATATAGAGATTTGGTTAGATGACTATCACGAGAACCATAAATTAGCTAATCTT TCCCTTGGAACAATAAATTGGGATAAAATTAAAATTGATAAATCATTTCTACATTACAATGACTATGACATAGAAGCAAT AAGATCACTTTGTTTTGTTTTAAGACCATTTACAAGAACAGGATTTATTTTTGAAGGTGTAGAAACTTATTATCAGGAGA GATTAGTTAGATTGTCTGGTTCACTATCTCAAGGGTACTTTCATTCATATCCTGAAAAATGGTCAAAACACTTATCAAGT CAAGGATACAAACATGATAAAGAAAAGGAAATTTAA
Upstream 100 bases:
>100_bases AAAACAAGTCAACTTATATAAAAACAAGCAAGTTTGGTAGACAACAATTTACACAAGAAATATATTAAAAGCATATGATG CAACATGATGGAGCTTATCC
Downstream 100 bases:
>100_bases AGAGTTCCAAGGAAAATCTGTATACTTAAAAATAAGATGCTACAGAAACCACATTATCTCCTTCAATTCAAATGGAAATA TTTCACACAAAGGGTTTATT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 251; Mature: 251
Protein sequence:
>251_residues MENYSIQNNEDTFLIRNRNESIYIEFVLQAIYNPSSKEIKYYEILSRIISSSGENYNNEDFFENIDDTFLKMIAICQLKE AKRLSINKPISINLTLSCLLDTDFINELIDRKNIELAIEINDINSNFDCDLLFENIKKLQRSNIEIWLDDYHENHKLANL SLGTINWDKIKIDKSFLHYNDYDIEAIRSLCFVLRPFTRTGFIFEGVETYYQERLVRLSGSLSQGYFHSYPEKWSKHLSS QGYKHDKEKEI
Sequences:
>Translated_251_residues MENYSIQNNEDTFLIRNRNESIYIEFVLQAIYNPSSKEIKYYEILSRIISSSGENYNNEDFFENIDDTFLKMIAICQLKE AKRLSINKPISINLTLSCLLDTDFINELIDRKNIELAIEINDINSNFDCDLLFENIKKLQRSNIEIWLDDYHENHKLANL SLGTINWDKIKIDKSFLHYNDYDIEAIRSLCFVLRPFTRTGFIFEGVETYYQERLVRLSGSLSQGYFHSYPEKWSKHLSS QGYKHDKEKEI >Mature_251_residues MENYSIQNNEDTFLIRNRNESIYIEFVLQAIYNPSSKEIKYYEILSRIISSSGENYNNEDFFENIDDTFLKMIAICQLKE AKRLSINKPISINLTLSCLLDTDFINELIDRKNIELAIEINDINSNFDCDLLFENIKKLQRSNIEIWLDDYHENHKLANL SLGTINWDKIKIDKSFLHYNDYDIEAIRSLCFVLRPFTRTGFIFEGVETYYQERLVRLSGSLSQGYFHSYPEKWSKHLSS QGYKHDKEKEI
Specific function: Unknown
COG id: COG2200
COG function: function code T; FOG: EAL domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29765; Mature: 29765
Theoretical pI: Translated: 4.86; Mature: 4.86
Prosite motif: PS50883 EAL
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MENYSIQNNEDTFLIRNRNESIYIEFVLQAIYNPSSKEIKYYEILSRIISSSGENYNNED CCCCCCCCCCCEEEEECCCCEEEHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCH FFENIDDTFLKMIAICQLKEAKRLSINKPISINLTLSCLLDTDFINELIDRKNIELAIEI HHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEEECHHHHHHHHCCCCCEEEEEE NDINSNFDCDLLFENIKKLQRSNIEIWLDDYHENHKLANLSLGTINWDKIKIDKSFLHYN ECCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCEEEEEEECCCCCCEEEEEHHHCCCC DYDIEAIRSLCFVLRPFTRTGFIFEGVETYYQERLVRLSGSLSQGYFHSYPEKWSKHLSS CCCHHHHHHHHHHHCCHHHCCHHHHHHHHHHHHHHHHHCCCCCCCHHHCCHHHHHHHHHC QGYKHDKEKEI CCCCCCCCCCC >Mature Secondary Structure MENYSIQNNEDTFLIRNRNESIYIEFVLQAIYNPSSKEIKYYEILSRIISSSGENYNNED CCCCCCCCCCCEEEEECCCCEEEHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCH FFENIDDTFLKMIAICQLKEAKRLSINKPISINLTLSCLLDTDFINELIDRKNIELAIEI HHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEEECHHHHHHHHCCCCCEEEEEE NDINSNFDCDLLFENIKKLQRSNIEIWLDDYHENHKLANLSLGTINWDKIKIDKSFLHYN ECCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCEEEEEEECCCCCCEEEEEHHHCCCC DYDIEAIRSLCFVLRPFTRTGFIFEGVETYYQERLVRLSGSLSQGYFHSYPEKWSKHLSS CCCHHHHHHHHHHHCCHHHCCHHHHHHHHHHHHHHHHHCCCCCCCHHHCCHHHHHHHHHC QGYKHDKEKEI CCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA