Definition | Vibrio vulnificus YJ016 chromosome I, complete sequence. |
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Accession | NC_005139 |
Length | 3,354,505 |
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The map label for this gene is 37680343
Identifier: 37680343
GI number: 37680343
Start: 2172666
End: 2172932
Strand: Direct
Name: 37680343
Synonym: VV2159
Alternate gene names: NA
Gene position: 2172666-2172932 (Clockwise)
Preceding gene: 37680342
Following gene: 37680344
Centisome position: 64.77
GC content: 43.07
Gene sequence:
>267_bases GTGACAAGCAATATGCGCAAATTTGAACAACTTTACGCCCTATGCCATGTATTTGGCTTCCGACTAGATGCTGAAGATGT CCATAAACTGAGTCAGAGCTTCACTGGAATGCCTTACATCAAGAAACAACGAAAGTTATTTAGTGCCATTCGAAAAGCCT ACATTCTTCGAGATAACGAAGAGCTGGGTTATGCGCTTTCAGCGAGAAGAAATGGCGTTAGCCTGTTTTACTGCTACCAA GTCCAATCAGGAGAGCCGCAATGTTAA
Upstream 100 bases:
>100_bases AATTTGTAATCCGTTTTTATCAATCCGTCTCAGTAAGCAAAATTGGCTATTCACCGTTAAATTAGATTCAAGATGACAAG TAACAGAGTGAGACGATCTA
Downstream 100 bases:
>100_bases CGAGAAATACGATGGAATGGAGTGATTTAGTTCAACGTGAAGGTTTTTGTGAGCTGCTGGAAGGCATGATGAAAAACGAC GACGGAATGGTCGGGCAATA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 88; Mature: 87
Protein sequence:
>88_residues MTSNMRKFEQLYALCHVFGFRLDAEDVHKLSQSFTGMPYIKKQRKLFSAIRKAYILRDNEELGYALSARRNGVSLFYCYQ VQSGEPQC
Sequences:
>Translated_88_residues MTSNMRKFEQLYALCHVFGFRLDAEDVHKLSQSFTGMPYIKKQRKLFSAIRKAYILRDNEELGYALSARRNGVSLFYCYQ VQSGEPQC >Mature_87_residues TSNMRKFEQLYALCHVFGFRLDAEDVHKLSQSFTGMPYIKKQRKLFSAIRKAYILRDNEELGYALSARRNGVSLFYCYQV QSGEPQC
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10294; Mature: 10163
Theoretical pI: Translated: 9.47; Mature: 9.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.4 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 6.8 %Cys+Met (Translated Protein) 3.4 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSNMRKFEQLYALCHVFGFRLDAEDVHKLSQSFTGMPYIKKQRKLFSAIRKAYILRDNE CCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCC ELGYALSARRNGVSLFYCYQVQSGEPQC CCCHHHHCCCCCCEEEEEEEECCCCCCC >Mature Secondary Structure TSNMRKFEQLYALCHVFGFRLDAEDVHKLSQSFTGMPYIKKQRKLFSAIRKAYILRDNE CCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCC ELGYALSARRNGVSLFYCYQVQSGEPQC CCCHHHHCCCCCCEEEEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA