Definition | Vibrio vulnificus YJ016 chromosome I, complete sequence. |
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Accession | NC_005139 |
Length | 3,354,505 |
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The map label for this gene is 37680344
Identifier: 37680344
GI number: 37680344
Start: 2172926
End: 2173336
Strand: Direct
Name: 37680344
Synonym: VV2160
Alternate gene names: NA
Gene position: 2172926-2173336 (Clockwise)
Preceding gene: 37680343
Following gene: 37680345
Centisome position: 64.78
GC content: 43.07
Gene sequence:
>411_bases ATGTTAACGAGAAATACGATGGAATGGAGTGATTTAGTTCAACGTGAAGGTTTTTGTGAGCTGCTGGAAGGCATGATGAA AAACGACGACGGAATGGTCGGGCAATATTATCTCTCTTTGAAAGAGATCGCAGAGAAGCACGGCATTGATGAGCAAGCGT TTGTCCTCTTCTTTGTTGCACTTTGCGAGCTTATGGGTGGATTCCAAGTCTATTTTCCCAAGAAAAGTAAACTCGAAAAC ACGATCAAAAAGCACTTAATTTTCAGTGAATTTGACGGTCAAAATTACGCCGACCTAGCGCGTAAATATCGAATCAGCGA AGACGTCGCACGGAAATATATTCGTGAAGTGGGCAGTACGATGAAAGCGCTGCGCAACGACGTTGCCCCACTTATTTCTA AAGACAAATAG
Upstream 100 bases:
>100_bases ACATTCTTCGAGATAACGAAGAGCTGGGTTATGCGCTTTCAGCGAGAAGAAATGGCGTTAGCCTGTTTTACTGCTACCAA GTCCAATCAGGAGAGCCGCA
Downstream 100 bases:
>100_bases TGAGATCGTTATGTCTAGAAAACGAATGAAAGCTCAGATGCAAGCTCAAAGACTCAATAGTCAACAAAAACGGTATCGTG CGATGAGTCGTTCACCTAAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 136; Mature: 136
Protein sequence:
>136_residues MLTRNTMEWSDLVQREGFCELLEGMMKNDDGMVGQYYLSLKEIAEKHGIDEQAFVLFFVALCELMGGFQVYFPKKSKLEN TIKKHLIFSEFDGQNYADLARKYRISEDVARKYIREVGSTMKALRNDVAPLISKDK
Sequences:
>Translated_136_residues MLTRNTMEWSDLVQREGFCELLEGMMKNDDGMVGQYYLSLKEIAEKHGIDEQAFVLFFVALCELMGGFQVYFPKKSKLEN TIKKHLIFSEFDGQNYADLARKYRISEDVARKYIREVGSTMKALRNDVAPLISKDK >Mature_136_residues MLTRNTMEWSDLVQREGFCELLEGMMKNDDGMVGQYYLSLKEIAEKHGIDEQAFVLFFVALCELMGGFQVYFPKKSKLEN TIKKHLIFSEFDGQNYADLARKYRISEDVARKYIREVGSTMKALRNDVAPLISKDK
Specific function: Unknown
COG id: COG5566
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15775; Mature: 15775
Theoretical pI: Translated: 6.53; Mature: 6.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 5.1 %Met (Translated Protein) 6.6 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 5.1 %Met (Mature Protein) 6.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLTRNTMEWSDLVQREGFCELLEGMMKNDDGMVGQYYLSLKEIAEKHGIDEQAFVLFFVA CCCCCCCCHHHHHHHCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHH LCELMGGFQVYFPKKSKLENTIKKHLIFSEFDGQNYADLARKYRISEDVARKYIREVGST HHHHHCCCEEECCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH MKALRNDVAPLISKDK HHHHHHHHHHHHCCCC >Mature Secondary Structure MLTRNTMEWSDLVQREGFCELLEGMMKNDDGMVGQYYLSLKEIAEKHGIDEQAFVLFFVA CCCCCCCCHHHHHHHCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHH LCELMGGFQVYFPKKSKLENTIKKHLIFSEFDGQNYADLARKYRISEDVARKYIREVGST HHHHHCCCEEECCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH MKALRNDVAPLISKDK HHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA