Definition | Vibrio vulnificus YJ016 chromosome I, complete sequence. |
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Accession | NC_005139 |
Length | 3,354,505 |
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The map label for this gene is 37680338
Identifier: 37680338
GI number: 37680338
Start: 2167901
End: 2168869
Strand: Direct
Name: 37680338
Synonym: VV2154
Alternate gene names: NA
Gene position: 2167901-2168869 (Clockwise)
Preceding gene: 37680337
Following gene: 37680339
Centisome position: 64.63
GC content: 46.54
Gene sequence:
>969_bases ATGTCCGATGAAATGAAGCAATTAGTGACAGCTCAACAAGCATTGAGCGATGCGCAAGAACTGAATGCAGCTGAAGCAAT AAGCATCGCTAGTTCGCACGGTGCCAGCCTTGATATTGGGGTGTTTCTAGGGCGTGTTCAGATGGCTCAATCCTTTGCAA CAATGGCCGACGTCGTCTCCTTATCCACTCTGAAAGAAATACGGGACTCTGGAAAATATAAGGAATTAAAGGGTTGGAAG ATAAATCTAGGACCAACATCGGACGACGTCGTCCAAACTTCCATTGTATTACAGGGGACTTGGGATGAGTTCTGCAAGCT CTGTGGGACATCAAAATCAACGGTTAATGAAAAACTGAAGCACTTATCTAGTTTTGGTGAAAAGGCTCTTCAGTCAATGC AGGAAATAGGCATGACAACACGTGATTTGCGTCGCCTGCGCCAACTGCCTCAGGAAGATTTGACCGCCATTGTTGAAGGT GAAGTGGTCAAGGTTCAAGACCGTGATGAAGCCTTGGAAATCATTGAAGAGTTGTCGGCAAAACATCGCCAAGAGAAGCA GGCACTACAATCCGAAGTCGCTAAGTTGGCCCAAGAAAAGCAGTCCAATGAAAGACTGTTAGCGGATAAGGATAAGAAGA TTAACGACTTATCCAAGAAACTCGATACGCCGCTTTCACCAGCACAAGCGCGCCAGAAAGAAGAAGAACGCAACAGCAAG TTACTCGATCAATTGAACGTGGCAACTCTGGCCGTCGATAGTGGTTTGGCTCGCCTGTTTGATGCGATTCAAACGATTCA TGACAACCCACATCCGACCGATATTGATGTTGCTTGTGAAAATGCGTTGTTCCATACCCTAGAACGACTCCTCGCCTTAT CAGCAGACCTAGGGATTAATGCGCATGTGCTTAGTCATTTAGAGCAATGGCACGCAGAAAATGGCCTGTTCTTGGGTAAC GAGGGCTGA
Upstream 100 bases:
>100_bases CACTTTATCAAGTTAGCTTTCACTTATCGCAACGCCGTTCGCGCAGAAGTTGATCGCATTGGAGCTGAATTTAAAGAGTT AACAGGAGAGGATTTATAAG
Downstream 100 bases:
>100_bases TCCACGATGAATGCACTTGAATTAGAACGCGCACAATACCTTAAACGTCTGATGTCGGATCTTGACCACTCGGGGCGTGG CCAAAAAGGGGTTATTGTTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 322; Mature: 321
Protein sequence:
>322_residues MSDEMKQLVTAQQALSDAQELNAAEAISIASSHGASLDIGVFLGRVQMAQSFATMADVVSLSTLKEIRDSGKYKELKGWK INLGPTSDDVVQTSIVLQGTWDEFCKLCGTSKSTVNEKLKHLSSFGEKALQSMQEIGMTTRDLRRLRQLPQEDLTAIVEG EVVKVQDRDEALEIIEELSAKHRQEKQALQSEVAKLAQEKQSNERLLADKDKKINDLSKKLDTPLSPAQARQKEEERNSK LLDQLNVATLAVDSGLARLFDAIQTIHDNPHPTDIDVACENALFHTLERLLALSADLGINAHVLSHLEQWHAENGLFLGN EG
Sequences:
>Translated_322_residues MSDEMKQLVTAQQALSDAQELNAAEAISIASSHGASLDIGVFLGRVQMAQSFATMADVVSLSTLKEIRDSGKYKELKGWK INLGPTSDDVVQTSIVLQGTWDEFCKLCGTSKSTVNEKLKHLSSFGEKALQSMQEIGMTTRDLRRLRQLPQEDLTAIVEG EVVKVQDRDEALEIIEELSAKHRQEKQALQSEVAKLAQEKQSNERLLADKDKKINDLSKKLDTPLSPAQARQKEEERNSK LLDQLNVATLAVDSGLARLFDAIQTIHDNPHPTDIDVACENALFHTLERLLALSADLGINAHVLSHLEQWHAENGLFLGN EG >Mature_321_residues SDEMKQLVTAQQALSDAQELNAAEAISIASSHGASLDIGVFLGRVQMAQSFATMADVVSLSTLKEIRDSGKYKELKGWKI NLGPTSDDVVQTSIVLQGTWDEFCKLCGTSKSTVNEKLKHLSSFGEKALQSMQEIGMTTRDLRRLRQLPQEDLTAIVEGE VVKVQDRDEALEIIEELSAKHRQEKQALQSEVAKLAQEKQSNERLLADKDKKINDLSKKLDTPLSPAQARQKEEERNSKL LDQLNVATLAVDSGLARLFDAIQTIHDNPHPTDIDVACENALFHTLERLLALSADLGINAHVLSHLEQWHAENGLFLGNE G
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35587; Mature: 35455
Theoretical pI: Translated: 4.88; Mature: 4.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDEMKQLVTAQQALSDAQELNAAEAISIASSHGASLDIGVFLGRVQMAQSFATMADVVS CCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHH LSTLKEIRDSGKYKELKGWKINLGPTSDDVVQTSIVLQGTWDEFCKLCGTSKSTVNEKLK HHHHHHHHHCCCCCCCCCEEEECCCCCHHHHHHHHEEECCHHHHHHHHCCCHHHHHHHHH HLSSFGEKALQSMQEIGMTTRDLRRLRQLPQEDLTAIVEGEVVKVQDRDEALEIIEELSA HHHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHCCCEEEECCHHHHHHHHHHHHH KHRQEKQALQSEVAKLAQEKQSNERLLADKDKKINDLSKKLDTPLSPAQARQKEEERNSK HHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHH LLDQLNVATLAVDSGLARLFDAIQTIHDNPHPTDIDVACENALFHTLERLLALSADLGIN HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCH AHVLSHLEQWHAENGLFLGNEG HHHHHHHHHHHCCCCEEECCCC >Mature Secondary Structure SDEMKQLVTAQQALSDAQELNAAEAISIASSHGASLDIGVFLGRVQMAQSFATMADVVS CHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHH LSTLKEIRDSGKYKELKGWKINLGPTSDDVVQTSIVLQGTWDEFCKLCGTSKSTVNEKLK HHHHHHHHHCCCCCCCCCEEEECCCCCHHHHHHHHEEECCHHHHHHHHCCCHHHHHHHHH HLSSFGEKALQSMQEIGMTTRDLRRLRQLPQEDLTAIVEGEVVKVQDRDEALEIIEELSA HHHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHCCCEEEECCHHHHHHHHHHHHH KHRQEKQALQSEVAKLAQEKQSNERLLADKDKKINDLSKKLDTPLSPAQARQKEEERNSK HHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHH LLDQLNVATLAVDSGLARLFDAIQTIHDNPHPTDIDVACENALFHTLERLLALSADLGIN HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCH AHVLSHLEQWHAENGLFLGNEG HHHHHHHHHHHCCCCEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA