Definition | Vibrio vulnificus YJ016 chromosome I, complete sequence. |
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Accession | NC_005139 |
Length | 3,354,505 |
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The map label for this gene is 37680337
Identifier: 37680337
GI number: 37680337
Start: 2167567
End: 2167899
Strand: Direct
Name: 37680337
Synonym: VV2153
Alternate gene names: NA
Gene position: 2167567-2167899 (Clockwise)
Preceding gene: 37680336
Following gene: 37680338
Centisome position: 64.62
GC content: 39.64
Gene sequence:
>333_bases ATGACAAACGTACGGGATACATCAAATGCGTGCCAGATGAAATCAACGACCATCGCCTTGGTCATTATAGAAACATTATT TGAATACGGTATTAAAGGCGCAACTTTTCGTGATATCGGATTTAAAACACAACTACCAAGAGCAACACTGCATCGCTATT TAAAAGTACTAGTCGATTCTGGTTGGGTTGAGGCATGTGGAAGTAAACAGAATATGGTTTGGAAGCCATCAAATCACTTT ATCAAGTTAGCTTTCACTTATCGCAACGCCGTTCGCGCAGAAGTTGATCGCATTGGAGCTGAATTTAAAGAGTTAACAGG AGAGGATTTATAA
Upstream 100 bases:
>100_bases TGTGTTGAAAAGTTTGGAAAGGAACGAGCACCTTCAAGAACTGGCTTAAGTCGGGCATTAAAAAAAATTCAAAACCAGAA AGCGTATTTGAGGTAAAGCA
Downstream 100 bases:
>100_bases GATGTCCGATGAAATGAAGCAATTAGTGACAGCTCAACAAGCATTGAGCGATGCGCAAGAACTGAATGCAGCTGAAGCAA TAAGCATCGCTAGTTCGCAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 110; Mature: 109
Protein sequence:
>110_residues MTNVRDTSNACQMKSTTIALVIIETLFEYGIKGATFRDIGFKTQLPRATLHRYLKVLVDSGWVEACGSKQNMVWKPSNHF IKLAFTYRNAVRAEVDRIGAEFKELTGEDL
Sequences:
>Translated_110_residues MTNVRDTSNACQMKSTTIALVIIETLFEYGIKGATFRDIGFKTQLPRATLHRYLKVLVDSGWVEACGSKQNMVWKPSNHF IKLAFTYRNAVRAEVDRIGAEFKELTGEDL >Mature_109_residues TNVRDTSNACQMKSTTIALVIIETLFEYGIKGATFRDIGFKTQLPRATLHRYLKVLVDSGWVEACGSKQNMVWKPSNHFI KLAFTYRNAVRAEVDRIGAEFKELTGEDL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12474; Mature: 12342
Theoretical pI: Translated: 9.20; Mature: 9.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTNVRDTSNACQMKSTTIALVIIETLFEYGIKGATFRDIGFKTQLPRATLHRYLKVLVDS CCCCCCCCCCHHHCHHHHHHHHHHHHHHHCCCCCEECCCCCCCCCCHHHHHHHHHHHHCC GWVEACGSKQNMVWKPSNHFIKLAFTYRNAVRAEVDRIGAEFKELTGEDL CHHHHCCCCCCEEECCCCCEEEEEEEHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure TNVRDTSNACQMKSTTIALVIIETLFEYGIKGATFRDIGFKTQLPRATLHRYLKVLVDS CCCCCCCCCHHHCHHHHHHHHHHHHHHHCCCCCEECCCCCCCCCCHHHHHHHHHHHHCC GWVEACGSKQNMVWKPSNHFIKLAFTYRNAVRAEVDRIGAEFKELTGEDL CHHHHCCCCCCEEECCCCCEEEEEEEHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA