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The map label for this gene is ygiQ [C]

Identifier: 37680327

GI number: 37680327

Start: 2157098

End: 2159404

Strand: Direct

Name: ygiQ [C]

Synonym: VV2143

Alternate gene names: 37680327

Gene position: 2157098-2159404 (Clockwise)

Preceding gene: 37680320

Following gene: 37680329

Centisome position: 64.3

GC content: 51.67

Gene sequence:

>2307_bases
ATGCACAGCGATATTACCCCTATCCATACCCACAAAAAATATTGGGCCGAATGTTTTGGCACCGCCCCTTTTCTGCCAAC
CAGCAGAAAAGAGATGGACGCATTGGGTTGGGATAGCTGTGACATTGTCCTAGTCACTGGCGATGCTTATGTCGACCATC
CGAGTTTTGGTATGGCGATCATCGGTCGCTTACTGGAAGCACAAGGCTTTCGCGTGGGCATCATTGCTCAACCACAGTGG
CAAGATAAAACCGACTTCATGTCGCTGGGTAAACCAAATCTGTTTTTTGGTGTCACCTCAGGCAACATGGACTCGATGAT
CAACCGCTACACTTCAGATCGCAAATTACGTCACGATGACGCCTACACACCAAACAACGAAGGCGGCAAGCGCCCAGACC
GTGCCACACTTGTTTACTCGCAGCGTTGTCGTGAAGCCTATAAAGACGTGCCTATCGTTTTAGGCGGCATTGAAGCGAGC
TTACGCCGTGTTGCTCACTACGATTACTGGTCCGACAAAGTGCGTCGCTCTGTTTTGCTTGATGCCAAAGCGGACATTTT
GTTGTTTGGTAACGCAGAACGTGCACTGGTGGAAGTGGCGCATCGTTTGGCTGAGGGCGAAGAGATCGCTCAAATGACCA
ACATTCGTGGCACCGCGGTTAACCTTGCGGCAGAGCCAGAAGGCTACACCATCATCGATTCCTCGCGCATCGAGAAGCCA
CGTAAAGAAGCCTTTATTCCACCAAACCCATACGAAGTGGAAACGCAGTGCGAAACCAAATCGGAAGAGCCCAAAGCGCA
GCCGATTACTATTCGTCCTTCGCGTCACGACGCCGCGACCACTGCGGTGCGTTTGCCAAGTTTCGAGAAGCTGCAAAACG
ACCGCATTCTTTATGCGCACGCCAGCCGTATTCTCCACTTGGAAACCAACCCTTATTCTGGCCGCGCACTGATCCAGCGT
CACGGTAACCGCGAGCTGTGGGTAAACCAAGCGCCGATCCCACTGACCACAGAAGAGATGGATTATGTGTTCGGTTTGCC
ATATGCGCGAGTTCCGCACCCGAAATATGGTAAAGCGAAGATTCCTGCCTATGACATGATCAAAACCTCCGTCAACATCA
TGCGTGGCTGTTTTGGTGGCTGTTCATTCTGCTCAATCACCGAGCACGAAGGACGCATCATTCAAAACCGCTCACAAGAG
TCGATTTTGACCGAGCTGGAAGAGATCCGCGATAAAGTACCCGGCTTTACGGGCACCATTTCTGACTTAGGCGGGCCAAC
AGCCAATATGTATCGCCTCGGTTGTAGCGATCCAAAAGCCGAAGCCAACTGTCGTCGCCCTTCGTGTGTCTTCCCGGGGA
TCTGTAATAAGCTCAATACCGATCATAAACACACCATTGATCTCTACCGAGCAGCGCGTCAGGTTAAAGGGGTGAAGAAA
GTGATGATCGCCTCTGGCGTTCGTTATGATCTCGCGATTGAATCGCCAGAATACGTCAAAGAACTGGTCACGCACCACGT
TGGTGGTTACTTGAAAATTGCGCCTGAGCATACCGAAAAAGGTCCTCTCGACCTGATGATGAAGCCGGGTATGGGTACTT
ACGATCGCTTCAAAGAGATGTTCGATAAGTACAGCCAAGAAGCGGGCAAGAAGCAGTATCTGATCCCTTACTTCATCTCT
GCTCACCCGGGCACGACTGATGAAGACATGTTGAACTTGGCGTTGTGGTTGAAGAAGAACAATTACGAGTGCGATCAGGT
ACAGAACTTCTACCCATCGCCAATGTGTAATGCAACATCGATGTACTACTCTGAGACCAACCCACTTAAACGCGTGAAGT
ACAAACAGCGTGAAGATGTGCCGGTAGCCAAAGGGGATCGCCAGCGTCGACTGCACAAAGCGCTGTTGCGTTACCACGAT
CCAGCCAACTGGCCGTTGATCCGTGAAGCACTGATCACTATGGGTAAGAAGTATTTGATCGGTGATAAACCAGGCTGTTT
GGTGCCAGCGGAAGATGTGGATGCTCGCACGCCAGCACAGCGTCGTAAATCAGGCCGTCATGGTGCTAACCGTTTTGCTA
CTAAACACACCAGCACCCAACCGGGCTTCCCGGGTGATAAAGCTAACGCTGGTTCAGGCAAAAAACCAACACGTGGCGGC
CAGTCAAACTCGGCGCCATCACGTTCAGGCTCAGCAACTGGTGGCAAACATCCACAACGCTCTGGTGCAAACACCGGTGG
GAAAAGCTCGGGTGGGAAAAACTCACCACGTGCAGGTGGCAGAAACCAACCGTCACGAGCTCGCTAA

Upstream 100 bases:

>100_bases
TTGGTTAGCGAAAAAACGTGATAAAACTAGGGTTATGTAGTGGTGGATAGTGGTCTCACAAGCCGCTATAATTCGCGCTC
GCAAAATCTGAGGTTATTTT

Downstream 100 bases:

>100_bases
CACCAATAAAAAAGAGGCGTCTGTGATCATAAAGCGCCTCTAAGTGTTCAAAAGCCAAGGTCTCGACCTTGGCTTTTTGT
ATGTTGATGTCACGTGTTAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 768; Mature: 768

Protein sequence:

>768_residues
MHSDITPIHTHKKYWAECFGTAPFLPTSRKEMDALGWDSCDIVLVTGDAYVDHPSFGMAIIGRLLEAQGFRVGIIAQPQW
QDKTDFMSLGKPNLFFGVTSGNMDSMINRYTSDRKLRHDDAYTPNNEGGKRPDRATLVYSQRCREAYKDVPIVLGGIEAS
LRRVAHYDYWSDKVRRSVLLDAKADILLFGNAERALVEVAHRLAEGEEIAQMTNIRGTAVNLAAEPEGYTIIDSSRIEKP
RKEAFIPPNPYEVETQCETKSEEPKAQPITIRPSRHDAATTAVRLPSFEKLQNDRILYAHASRILHLETNPYSGRALIQR
HGNRELWVNQAPIPLTTEEMDYVFGLPYARVPHPKYGKAKIPAYDMIKTSVNIMRGCFGGCSFCSITEHEGRIIQNRSQE
SILTELEEIRDKVPGFTGTISDLGGPTANMYRLGCSDPKAEANCRRPSCVFPGICNKLNTDHKHTIDLYRAARQVKGVKK
VMIASGVRYDLAIESPEYVKELVTHHVGGYLKIAPEHTEKGPLDLMMKPGMGTYDRFKEMFDKYSQEAGKKQYLIPYFIS
AHPGTTDEDMLNLALWLKKNNYECDQVQNFYPSPMCNATSMYYSETNPLKRVKYKQREDVPVAKGDRQRRLHKALLRYHD
PANWPLIREALITMGKKYLIGDKPGCLVPAEDVDARTPAQRRKSGRHGANRFATKHTSTQPGFPGDKANAGSGKKPTRGG
QSNSAPSRSGSATGGKHPQRSGANTGGKSSGGKNSPRAGGRNQPSRAR

Sequences:

>Translated_768_residues
MHSDITPIHTHKKYWAECFGTAPFLPTSRKEMDALGWDSCDIVLVTGDAYVDHPSFGMAIIGRLLEAQGFRVGIIAQPQW
QDKTDFMSLGKPNLFFGVTSGNMDSMINRYTSDRKLRHDDAYTPNNEGGKRPDRATLVYSQRCREAYKDVPIVLGGIEAS
LRRVAHYDYWSDKVRRSVLLDAKADILLFGNAERALVEVAHRLAEGEEIAQMTNIRGTAVNLAAEPEGYTIIDSSRIEKP
RKEAFIPPNPYEVETQCETKSEEPKAQPITIRPSRHDAATTAVRLPSFEKLQNDRILYAHASRILHLETNPYSGRALIQR
HGNRELWVNQAPIPLTTEEMDYVFGLPYARVPHPKYGKAKIPAYDMIKTSVNIMRGCFGGCSFCSITEHEGRIIQNRSQE
SILTELEEIRDKVPGFTGTISDLGGPTANMYRLGCSDPKAEANCRRPSCVFPGICNKLNTDHKHTIDLYRAARQVKGVKK
VMIASGVRYDLAIESPEYVKELVTHHVGGYLKIAPEHTEKGPLDLMMKPGMGTYDRFKEMFDKYSQEAGKKQYLIPYFIS
AHPGTTDEDMLNLALWLKKNNYECDQVQNFYPSPMCNATSMYYSETNPLKRVKYKQREDVPVAKGDRQRRLHKALLRYHD
PANWPLIREALITMGKKYLIGDKPGCLVPAEDVDARTPAQRRKSGRHGANRFATKHTSTQPGFPGDKANAGSGKKPTRGG
QSNSAPSRSGSATGGKHPQRSGANTGGKSSGGKNSPRAGGRNQPSRAR
>Mature_768_residues
MHSDITPIHTHKKYWAECFGTAPFLPTSRKEMDALGWDSCDIVLVTGDAYVDHPSFGMAIIGRLLEAQGFRVGIIAQPQW
QDKTDFMSLGKPNLFFGVTSGNMDSMINRYTSDRKLRHDDAYTPNNEGGKRPDRATLVYSQRCREAYKDVPIVLGGIEAS
LRRVAHYDYWSDKVRRSVLLDAKADILLFGNAERALVEVAHRLAEGEEIAQMTNIRGTAVNLAAEPEGYTIIDSSRIEKP
RKEAFIPPNPYEVETQCETKSEEPKAQPITIRPSRHDAATTAVRLPSFEKLQNDRILYAHASRILHLETNPYSGRALIQR
HGNRELWVNQAPIPLTTEEMDYVFGLPYARVPHPKYGKAKIPAYDMIKTSVNIMRGCFGGCSFCSITEHEGRIIQNRSQE
SILTELEEIRDKVPGFTGTISDLGGPTANMYRLGCSDPKAEANCRRPSCVFPGICNKLNTDHKHTIDLYRAARQVKGVKK
VMIASGVRYDLAIESPEYVKELVTHHVGGYLKIAPEHTEKGPLDLMMKPGMGTYDRFKEMFDKYSQEAGKKQYLIPYFIS
AHPGTTDEDMLNLALWLKKNNYECDQVQNFYPSPMCNATSMYYSETNPLKRVKYKQREDVPVAKGDRQRRLHKALLRYHD
PANWPLIREALITMGKKYLIGDKPGCLVPAEDVDARTPAQRRKSGRHGANRFATKHTSTQPGFPGDKANAGSGKKPTRGG
QSNSAPSRSGSATGGKHPQRSGANTGGKSSGGKNSPRAGGRNQPSRAR

Specific function: Unknown

COG id: COG1032

COG function: function code C; Fe-S oxidoreductase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0313 family

Homologues:

Organism=Escherichia coli, GI48994917, Length=730, Percent_Identity=66.027397260274, Blast_Score=997, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y2143_VIBVY (Q7MJL8)

Other databases:

- EMBL:   BA000037
- RefSeq:   NP_934936.1
- ProteinModelPortal:   Q7MJL8
- STRING:   Q7MJL8
- GeneID:   2624949
- GenomeReviews:   BA000037_GR
- KEGG:   vvy:VV2143
- NMPDR:   fig|196600.1.peg.2211
- eggNOG:   COG1032
- HOGENOM:   HBG500854
- OMA:   FLPMSRA
- ProtClustDB:   PRK01254
- BioCyc:   VVUL196600:VV2143-MONOMER
- HAMAP:   MF_01251
- InterPro:   IPR006638
- InterPro:   IPR020612
- InterPro:   IPR007197
- InterPro:   IPR013704
- InterPro:   IPR022946
- SMART:   SM00729

Pfam domain/function: PF04055 Radical_SAM; PF08497 Radical_SAM_N

EC number: NA

Molecular weight: Translated: 85802; Mature: 85802

Theoretical pI: Translated: 9.52; Mature: 9.52

Prosite motif: PS01278 UPF0004

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHSDITPIHTHKKYWAECFGTAPFLPTSRKEMDALGWDSCDIVLVTGDAYVDHPSFGMAI
CCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCCCEEEEECCCEECCCCHHHHH
IGRLLEAQGFRVGIIAQPQWQDKTDFMSLGKPNLFFGVTSGNMDSMINRYTSDRKLRHDD
HHHHHHCCCCEEEEEECCCCCCCHHHHHCCCCCEEEEECCCCHHHHHHHHHCCCCCCCCC
AYTPNNEGGKRPDRATLVYSQRCREAYKDVPIVLGGIEASLRRVAHYDYWSDKVRRSVLL
CCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEECHHHHHHHHHHCCHHHHHHHHHHHC
DAKADILLFGNAERALVEVAHRLAEGEEIAQMTNIRGTAVNLAAEPEGYTIIDSSRIEKP
CCCCCEEEECCCHHHHHHHHHHHHCCHHHHHHHCCCCEEEEEEECCCCCEEEEHHHCCCC
RKEAFIPPNPYEVETQCETKSEEPKAQPITIRPSRHDAATTAVRLPSFEKLQNDRILYAH
HHHCCCCCCCCEEECCCCCCCCCCCCCCEEECCCCCCHHHHEEECCCHHHHCCCCEEEEE
ASRILHLETNPYSGRALIQRHGNRELWVNQAPIPLTTEEMDYVFGLPYARVPHPKYGKAK
CCEEEEEECCCCCCHHHHHHCCCCEEEEECCCCCCCHHCCHHHHCCCCCCCCCCCCCCCC
IPAYDMIKTSVNIMRGCFGGCSFCSITEHEGRIIQNRSQESILTELEEIRDKVPGFTGTI
CCHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHCCCHHHHHHHHHHHHHHCCCCCEEH
SDLGGPTANMYRLGCSDPKAEANCRRPSCVFPGICNKLNTDHKHTIDLYRAARQVKGVKK
HHCCCCCCCEEEECCCCCCCCCCCCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHH
VMIASGVRYDLAIESPEYVKELVTHHVGGYLKIAPEHTEKGPLDLMMKPGMGTYDRFKEM
HHHHCCCEEEEEECCHHHHHHHHHHHCCCEEEECCCCCCCCCCEEEECCCCCHHHHHHHH
FDKYSQEAGKKQYLIPYFISAHPGTTDEDMLNLALWLKKNNYECDQVQNFYPSPMCNATS
HHHHHHHCCCCEEEEEEEEECCCCCCHHHHHEEEEEEECCCCCHHHHHCCCCCCCCCCHH
MYYSETNPLKRVKYKQREDVPVAKGDRQRRLHKALLRYHDPANWPLIREALITMGKKYLI
EEECCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCEEEE
GDKPGCLVPAEDVDARTPAQRRKSGRHGANRFATKHTSTQPGFPGDKANAGSGKKPTRGG
CCCCCCEECCCCCCCCCCHHHHHCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC
QSNSAPSRSGSATGGKHPQRSGANTGGKSSGGKNSPRAGGRNQPSRAR
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MHSDITPIHTHKKYWAECFGTAPFLPTSRKEMDALGWDSCDIVLVTGDAYVDHPSFGMAI
CCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCCCEEEEECCCEECCCCHHHHH
IGRLLEAQGFRVGIIAQPQWQDKTDFMSLGKPNLFFGVTSGNMDSMINRYTSDRKLRHDD
HHHHHHCCCCEEEEEECCCCCCCHHHHHCCCCCEEEEECCCCHHHHHHHHHCCCCCCCCC
AYTPNNEGGKRPDRATLVYSQRCREAYKDVPIVLGGIEASLRRVAHYDYWSDKVRRSVLL
CCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEECHHHHHHHHHHCCHHHHHHHHHHHC
DAKADILLFGNAERALVEVAHRLAEGEEIAQMTNIRGTAVNLAAEPEGYTIIDSSRIEKP
CCCCCEEEECCCHHHHHHHHHHHHCCHHHHHHHCCCCEEEEEEECCCCCEEEEHHHCCCC
RKEAFIPPNPYEVETQCETKSEEPKAQPITIRPSRHDAATTAVRLPSFEKLQNDRILYAH
HHHCCCCCCCCEEECCCCCCCCCCCCCCEEECCCCCCHHHHEEECCCHHHHCCCCEEEEE
ASRILHLETNPYSGRALIQRHGNRELWVNQAPIPLTTEEMDYVFGLPYARVPHPKYGKAK
CCEEEEEECCCCCCHHHHHHCCCCEEEEECCCCCCCHHCCHHHHCCCCCCCCCCCCCCCC
IPAYDMIKTSVNIMRGCFGGCSFCSITEHEGRIIQNRSQESILTELEEIRDKVPGFTGTI
CCHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHCCCHHHHHHHHHHHHHHCCCCCEEH
SDLGGPTANMYRLGCSDPKAEANCRRPSCVFPGICNKLNTDHKHTIDLYRAARQVKGVKK
HHCCCCCCCEEEECCCCCCCCCCCCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHH
VMIASGVRYDLAIESPEYVKELVTHHVGGYLKIAPEHTEKGPLDLMMKPGMGTYDRFKEM
HHHHCCCEEEEEECCHHHHHHHHHHHCCCEEEECCCCCCCCCCEEEECCCCCHHHHHHHH
FDKYSQEAGKKQYLIPYFISAHPGTTDEDMLNLALWLKKNNYECDQVQNFYPSPMCNATS
HHHHHHHCCCCEEEEEEEEECCCCCCHHHHHEEEEEEECCCCCHHHHHCCCCCCCCCCHH
MYYSETNPLKRVKYKQREDVPVAKGDRQRRLHKALLRYHDPANWPLIREALITMGKKYLI
EEECCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCEEEE
GDKPGCLVPAEDVDARTPAQRRKSGRHGANRFATKHTSTQPGFPGDKANAGSGKKPTRGG
CCCCCCEECCCCCCCCCCHHHHHCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC
QSNSAPSRSGSATGGKHPQRSGANTGGKSSGGKNSPRAGGRNQPSRAR
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA