Definition | Vibrio vulnificus YJ016 chromosome I, complete sequence. |
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Accession | NC_005139 |
Length | 3,354,505 |
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The map label for this gene is dnaK [H]
Identifier: 37680209
GI number: 37680209
Start: 2020500
End: 2022413
Strand: Direct
Name: dnaK [H]
Synonym: VV2025
Alternate gene names: 37680209
Gene position: 2020500-2022413 (Clockwise)
Preceding gene: 37680208
Following gene: 37680210
Centisome position: 60.23
GC content: 52.93
Gene sequence:
>1914_bases ATGGAAACGATGATGACACCCGCAACCGAGCAAGTGGCAAAATTCAGCGTTGGTATCGACTTAGGTACCACGCATTGTGT TATGTCATTCATGGATACCCAGGATGAGCAAGCTCGCGTACAAGTGATGGCCATTCCGCAATTGACGGCGCCTGGTACCG TTGAGTCTCGTAACCAACTTGGTTCGTTTCTTTACCAGCCGCATGAACATGAAATGAACCCAGCATCACGCGTGTTGCCA TGGACGACAGAGCCTACTGCTCTCGTCGGCGCAATCGCACGTAATTTGGGTGGTAAAACGCCTTTGCGTTTGGTGGCCAG TGCGAAATCTTGGCTTTGCCATGGTGGCGTGAATCGCCGCGATGCGTTTCTACCAGCTGGCAGCCCAGAAGAGATTGAAA AAGTCTCACCACTGCGCGCAACCGAGCTTTATTTAGAGCATCTTAAGCAAGCGTGGGATCACGCACAGCCAAACCATCCG CTATCAGAGCAAGACGTGACCATCACAGTGCCGGCATCGTTTGATCCTGCGGCGCGCGATCTGACGGCAGAAGCGGCGCG CAATGTCGGTTTTGTCCATCTTACCTTGCTGGAAGAGCCTCAAGCCGCGCTTTACAACTGGATCGACAACAGCAATGACA AATGGCGCGATGAAGTCACTGTGGGTGATATCGTGCTGGTGGTGGACATCGGCGGTGGTACTACTGACCTTTCTCTGGTG GAAGTGACCGAAGAAGAAGGCAATCTGACCCTCAAACGCATCGCTGTCGGTGAACACATTCTGCTGGGTGGTGACAACAT GGATCTTGCCCTCGCCTACAGCTTGAAGATGAAGCTGGCTCAGGAAGGCAAAGAGCTGCAACCTTGGCAAGTACAAGCCA TGACGCACGCTTGCCGTGACGCGAAAGAAGCGCTGCTCAATGATGCCGAACTGCAATCGGTACCGATTGTCGTGCCAAGC CGCGGTTCTAAGTTGCTCGGCGCAACGCTGAAAACCGAGCTGACGCAGCAAGAAGTGCAGCAAATGCTCGTCGATGGCTT TTTCCCTAAAGTCGCTATCACCGAACACCCAGTACAACGTAACCGCGGTGCACTGACCCAGATGGGCCTGCCTTATGCAC AAGATGCAGGTATCACTCGCCACATTGCGGCTTTCTTGTCAAAGCAAGCAAATGCCAACAGTGAAGCGGCACCTGCACAA GATTACAATCCGTTTGTTGGTGGAATGCCGGGTATGCCTGGCGCTCAACAAGCTTCTGTCGATTTCATCAAACCGACTGC GATTTTGTTCAATGGTGGTGTGCTGAAATCAGCTCTCTTAGCAGAACGCTTAGAAGAGACCATCAACGAATGGTTGCTTG ACGCTGATGCAGAGATGGCAAAACGACTCACCGGCGTCGATTTGGATCTCGCGGTGGCGAGCGGTGCGGCTTACTATGGC GCAGTGCGTCGTGGTCAAGGTGTACGTATCCGCGGTGGTATTGCTTCAAGCTATTACGTCGGTATCGAGAGCGCAATGCC TGCTATTCCGGGTATGGCACCGCCAATGGAAGCACTGTGTGTGGCACCGTTTGGCATGGAAGAAGGCACCAGCGTCGATG TACCAAGTCAGCAGTTTGGTTTGATCATCGGCCAGCCAGTGAACTTCCAATTCTTTGGCTCAACGGTTCGTCGTGAAGAT CTTGCAGGAACACATTTGGACCATTGGGGCCCAGATGAACTTGAAGAATTACCAGAGATTCAAGTGACGTTACCGGTTTC AGAGGGTCGCCGTGAAGGCGAAGTGGTGCCGGTGACATTGGCCTCACGCGTGACTGAACTTGGCACGCTGTATTTAGAAG CGATTGCGGCGGATAACGGTCAAAAATGGCACGTGGAATTTGACGTGCGTGACGATGCCTCTTTGGCAGAATAA
Upstream 100 bases:
>100_bases CCTTAATCCACAAAGGTTGGAAAGCTTCTGCAATGACGCTACCGAAACTAGCGGAAAACTACGACGCTTCGATCATCGCA CCCGCTGAGGTTGAGCTGTA
Downstream 100 bases:
>100_bases TCGAACAAAGCAAACGGCATCCGAAGGGTGCCGTTTTTAAATCAATCAAGGGTTTGTCATGGCATCTCCTCGCTATCTTG TCGGCATTGACTTAGGCACC
Product: DnaK-related protein
Products: NA
Alternate protein names: HSP70; Heat shock 70 kDa protein; Heat shock protein 70 [H]
Number of amino acids: Translated: 637; Mature: 637
Protein sequence:
>637_residues METMMTPATEQVAKFSVGIDLGTTHCVMSFMDTQDEQARVQVMAIPQLTAPGTVESRNQLGSFLYQPHEHEMNPASRVLP WTTEPTALVGAIARNLGGKTPLRLVASAKSWLCHGGVNRRDAFLPAGSPEEIEKVSPLRATELYLEHLKQAWDHAQPNHP LSEQDVTITVPASFDPAARDLTAEAARNVGFVHLTLLEEPQAALYNWIDNSNDKWRDEVTVGDIVLVVDIGGGTTDLSLV EVTEEEGNLTLKRIAVGEHILLGGDNMDLALAYSLKMKLAQEGKELQPWQVQAMTHACRDAKEALLNDAELQSVPIVVPS RGSKLLGATLKTELTQQEVQQMLVDGFFPKVAITEHPVQRNRGALTQMGLPYAQDAGITRHIAAFLSKQANANSEAAPAQ DYNPFVGGMPGMPGAQQASVDFIKPTAILFNGGVLKSALLAERLEETINEWLLDADAEMAKRLTGVDLDLAVASGAAYYG AVRRGQGVRIRGGIASSYYVGIESAMPAIPGMAPPMEALCVAPFGMEEGTSVDVPSQQFGLIIGQPVNFQFFGSTVRRED LAGTHLDHWGPDELEELPEIQVTLPVSEGRREGEVVPVTLASRVTELGTLYLEAIAADNGQKWHVEFDVRDDASLAE
Sequences:
>Translated_637_residues METMMTPATEQVAKFSVGIDLGTTHCVMSFMDTQDEQARVQVMAIPQLTAPGTVESRNQLGSFLYQPHEHEMNPASRVLP WTTEPTALVGAIARNLGGKTPLRLVASAKSWLCHGGVNRRDAFLPAGSPEEIEKVSPLRATELYLEHLKQAWDHAQPNHP LSEQDVTITVPASFDPAARDLTAEAARNVGFVHLTLLEEPQAALYNWIDNSNDKWRDEVTVGDIVLVVDIGGGTTDLSLV EVTEEEGNLTLKRIAVGEHILLGGDNMDLALAYSLKMKLAQEGKELQPWQVQAMTHACRDAKEALLNDAELQSVPIVVPS RGSKLLGATLKTELTQQEVQQMLVDGFFPKVAITEHPVQRNRGALTQMGLPYAQDAGITRHIAAFLSKQANANSEAAPAQ DYNPFVGGMPGMPGAQQASVDFIKPTAILFNGGVLKSALLAERLEETINEWLLDADAEMAKRLTGVDLDLAVASGAAYYG AVRRGQGVRIRGGIASSYYVGIESAMPAIPGMAPPMEALCVAPFGMEEGTSVDVPSQQFGLIIGQPVNFQFFGSTVRRED LAGTHLDHWGPDELEELPEIQVTLPVSEGRREGEVVPVTLASRVTELGTLYLEAIAADNGQKWHVEFDVRDDASLAE >Mature_637_residues METMMTPATEQVAKFSVGIDLGTTHCVMSFMDTQDEQARVQVMAIPQLTAPGTVESRNQLGSFLYQPHEHEMNPASRVLP WTTEPTALVGAIARNLGGKTPLRLVASAKSWLCHGGVNRRDAFLPAGSPEEIEKVSPLRATELYLEHLKQAWDHAQPNHP LSEQDVTITVPASFDPAARDLTAEAARNVGFVHLTLLEEPQAALYNWIDNSNDKWRDEVTVGDIVLVVDIGGGTTDLSLV EVTEEEGNLTLKRIAVGEHILLGGDNMDLALAYSLKMKLAQEGKELQPWQVQAMTHACRDAKEALLNDAELQSVPIVVPS RGSKLLGATLKTELTQQEVQQMLVDGFFPKVAITEHPVQRNRGALTQMGLPYAQDAGITRHIAAFLSKQANANSEAAPAQ DYNPFVGGMPGMPGAQQASVDFIKPTAILFNGGVLKSALLAERLEETINEWLLDADAEMAKRLTGVDLDLAVASGAAYYG AVRRGQGVRIRGGIASSYYVGIESAMPAIPGMAPPMEALCVAPFGMEEGTSVDVPSQQFGLIIGQPVNFQFFGSTVRRED LAGTHLDHWGPDELEELPEIQVTLPVSEGRREGEVVPVTLASRVTELGTLYLEAIAADNGQKWHVEFDVRDDASLAE
Specific function: Acts as a chaperone [H]
COG id: COG0443
COG function: function code O; Molecular chaperone
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the heat shock protein 70 family [H]
Homologues:
Organism=Escherichia coli, GI1786196, Length=304, Percent_Identity=25.6578947368421, Blast_Score=70, Evalue=3e-13,
Paralogues:
None
Copy number: 1300 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 320 Molecules/Cell In: Early Stationary Phase, Rich Media (Based on E. coli). 500 Molecules/Cell In: Early Stationary Phase, Rich Media (Based on E. coli). 20 Molecules/Cell In: Stati
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012725 - InterPro: IPR018181 - InterPro: IPR001023 - InterPro: IPR013126 [H]
Pfam domain/function: PF00012 HSP70 [H]
EC number: NA
Molecular weight: Translated: 69001; Mature: 69001
Theoretical pI: Translated: 4.48; Mature: 4.48
Prosite motif: PS00297 HSP70_1 ; PS00329 HSP70_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure METMMTPATEQVAKFSVGIDLGTTHCVMSFMDTQDEQARVQVMAIPQLTAPGTVESRNQL CCCCCCCCHHHHHHEEECCCCCHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCHHHH GSFLYQPHEHEMNPASRVLPWTTEPTALVGAIARNLGGKTPLRLVASAKSWLCHGGVNRR HHHHCCCCCCCCCHHHCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCC DAFLPAGSPEEIEKVSPLRATELYLEHLKQAWDHAQPNHPLSEQDVTITVPASFDPAARD CCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCHHHH LTAEAARNVGFVHLTLLEEPQAALYNWIDNSNDKWRDEVTVGDIVLVVDIGGGTTDLSLV HHHHHHHCCCEEEEEEECCCHHHHHHHHCCCCCCCCCCEEECCEEEEEECCCCCCCEEEE EVTEEEGNLTLKRIAVGEHILLGGDNMDLALAYSLKMKLAQEGKELQPWQVQAMTHACRD EEECCCCCEEEEEEECCCEEEECCCCCCEEEEEHHHHHHHHCCCCCCCHHHHHHHHHHHH AKEALLNDAELQSVPIVVPSRGSKLLGATLKTELTQQEVQQMLVDGFFPKVAITEHPVQR HHHHHHCCCCCCCCCEEECCCCCEEHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCHHH NRGALTQMGLPYAQDAGITRHIAAFLSKQANANSEAAPAQDYNPFVGGMPGMPGAQQASV CCCCHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC DFIKPTAILFNGGVLKSALLAERLEETINEWLLDADAEMAKRLTGVDLDLAVASGAAYYG EEECCEEEEEECCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCEEEEECCCCHHHH AVRRGQGVRIRGGIASSYYVGIESAMPAIPGMAPPMEALCVAPFGMEEGTSVDVPSQQFG HHHCCCCEEEECCCCCEEEEEHHHHCCCCCCCCCCHHHHEECCCCCCCCCCCCCCCHHCC LIIGQPVNFQFFGSTVRREDLAGTHLDHWGPDELEELPEIQVTLPVSEGRREGEVVPVTL EEEECCCCEEECCCHHHHHHCCCCCCCCCCHHHHHHCCCEEEEEEHHCCCCCCCEEEEEH ASRVTELGTLYLEAIAADNGQKWHVEFDVRDDASLAE HHHHHHHHHHHHHHEECCCCCEEEEEEECCCCCCCCC >Mature Secondary Structure METMMTPATEQVAKFSVGIDLGTTHCVMSFMDTQDEQARVQVMAIPQLTAPGTVESRNQL CCCCCCCCHHHHHHEEECCCCCHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCHHHH GSFLYQPHEHEMNPASRVLPWTTEPTALVGAIARNLGGKTPLRLVASAKSWLCHGGVNRR HHHHCCCCCCCCCHHHCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCC DAFLPAGSPEEIEKVSPLRATELYLEHLKQAWDHAQPNHPLSEQDVTITVPASFDPAARD CCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCHHHH LTAEAARNVGFVHLTLLEEPQAALYNWIDNSNDKWRDEVTVGDIVLVVDIGGGTTDLSLV HHHHHHHCCCEEEEEEECCCHHHHHHHHCCCCCCCCCCEEECCEEEEEECCCCCCCEEEE EVTEEEGNLTLKRIAVGEHILLGGDNMDLALAYSLKMKLAQEGKELQPWQVQAMTHACRD EEECCCCCEEEEEEECCCEEEECCCCCCEEEEEHHHHHHHHCCCCCCCHHHHHHHHHHHH AKEALLNDAELQSVPIVVPSRGSKLLGATLKTELTQQEVQQMLVDGFFPKVAITEHPVQR HHHHHHCCCCCCCCCEEECCCCCEEHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCHHH NRGALTQMGLPYAQDAGITRHIAAFLSKQANANSEAAPAQDYNPFVGGMPGMPGAQQASV CCCCHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC DFIKPTAILFNGGVLKSALLAERLEETINEWLLDADAEMAKRLTGVDLDLAVASGAAYYG EEECCEEEEEECCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCEEEEECCCCHHHH AVRRGQGVRIRGGIASSYYVGIESAMPAIPGMAPPMEALCVAPFGMEEGTSVDVPSQQFG HHHCCCCEEEECCCCCEEEEEHHHHCCCCCCCCCCHHHHEECCCCCCCCCCCCCCCHHCC LIIGQPVNFQFFGSTVRREDLAGTHLDHWGPDELEELPEIQVTLPVSEGRREGEVVPVTL EEEECCCCEEECCCHHHHHHCCCCCCCCCCHHHHHHCCCEEEEEEHHCCCCCCCEEEEEH ASRVTELGTLYLEAIAADNGQKWHVEFDVRDDASLAE HHHHHHHHHHHHHHEECCCCCEEEEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12835416 [H]