Definition | Vibrio vulnificus YJ016 chromosome I, complete sequence. |
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Accession | NC_005139 |
Length | 3,354,505 |
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The map label for this gene is 37680208
Identifier: 37680208
GI number: 37680208
Start: 2019868
End: 2020500
Strand: Direct
Name: 37680208
Synonym: VV2024
Alternate gene names: NA
Gene position: 2019868-2020500 (Clockwise)
Preceding gene: 37680203
Following gene: 37680209
Centisome position: 60.21
GC content: 45.34
Gene sequence:
>633_bases ATGAACATTGATTTAAACCTTATTCCTCAAACGTTCGATATGCTTCACGCAGGTCTAGCGGCATCGAGCGTTTTATTACT ACTCGTGGCGGTTTCTCGTAAATCCAAAGTGATCGAGAAAGTGGTTGAGAAGCCTGTAGAAAAAATCGTTGAAGTCGAAA AACCGGTCGAAAAAATCGTCGAAGTAGAGAAAGTTGTTGAAGTTGAGAAAGTGATTGAAAAAGTGGTTGAAGTGGAATCT AAGCTTGCCACCGCATCCACCGATTCTGCGATGCAACTGCTTTCTATCATGCAACAAGAAGCTCGCTTGATTGACTTCCT ACAAGAAGATCTCACCTCATTCTCTGATGAAGAAGTGGGCGCAGCAGCGCGTGTTATTCATAGCGGTGGCCAAAAAGTCC TAAAAGAGTACGTAACGCTTGAAGCGATCCGTAACGAAGACGAAGAGAGCCGCATTGTGGTCGAAGAAGGCTTTAACCCT CAAGCGATTCGTTTAGTCGGAAACGTAACTGGTAATGCGCCATTTAACGGCACCTTAATCCACAAAGGTTGGAAAGCTTC TGCAATGACGCTACCGAAACTAGCGGAAAACTACGACGCTTCGATCATCGCACCCGCTGAGGTTGAGCTGTAA
Upstream 100 bases:
>100_bases TACGTCTAAACTAGGTGCAAATCGCAAATTCGCCCGTCTATGTCGTCTATCGCGAGCCAATCTATGCACCTTTAAATCAA TCGAATAGAGAAAAATTAGC
Downstream 100 bases:
>100_bases TGGAAACGATGATGACACCCGCAACCGAGCAAGTGGCAAAATTCAGCGTTGGTATCGACTTAGGTACCACGCATTGTGTT ATGTCATTCATGGATACCCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 210; Mature: 210
Protein sequence:
>210_residues MNIDLNLIPQTFDMLHAGLAASSVLLLLVAVSRKSKVIEKVVEKPVEKIVEVEKPVEKIVEVEKVVEVEKVIEKVVEVES KLATASTDSAMQLLSIMQQEARLIDFLQEDLTSFSDEEVGAAARVIHSGGQKVLKEYVTLEAIRNEDEESRIVVEEGFNP QAIRLVGNVTGNAPFNGTLIHKGWKASAMTLPKLAENYDASIIAPAEVEL
Sequences:
>Translated_210_residues MNIDLNLIPQTFDMLHAGLAASSVLLLLVAVSRKSKVIEKVVEKPVEKIVEVEKPVEKIVEVEKVVEVEKVIEKVVEVES KLATASTDSAMQLLSIMQQEARLIDFLQEDLTSFSDEEVGAAARVIHSGGQKVLKEYVTLEAIRNEDEESRIVVEEGFNP QAIRLVGNVTGNAPFNGTLIHKGWKASAMTLPKLAENYDASIIAPAEVEL >Mature_210_residues MNIDLNLIPQTFDMLHAGLAASSVLLLLVAVSRKSKVIEKVVEKPVEKIVEVEKPVEKIVEVEKVVEVEKVIEKVVEVES KLATASTDSAMQLLSIMQQEARLIDFLQEDLTSFSDEEVGAAARVIHSGGQKVLKEYVTLEAIRNEDEESRIVVEEGFNP QAIRLVGNVTGNAPFNGTLIHKGWKASAMTLPKLAENYDASIIAPAEVEL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23031; Mature: 23031
Theoretical pI: Translated: 4.46; Mature: 4.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNIDLNLIPQTFDMLHAGLAASSVLLLLVAVSRKSKVIEKVVEKPVEKIVEVEKPVEKIV CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EVEKVVEVEKVIEKVVEVESKLATASTDSAMQLLSIMQQEARLIDFLQEDLTSFSDEEVG HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH AAARVIHSGGQKVLKEYVTLEAIRNEDEESRIVVEEGFNPQAIRLVGNVTGNAPFNGTLI HHHHHHHHCHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCEEEEEECCCCCCCCCCEEE HKGWKASAMTLPKLAENYDASIIAPAEVEL ECCCCCHHHHHHHHHCCCCCCEECCCCCCC >Mature Secondary Structure MNIDLNLIPQTFDMLHAGLAASSVLLLLVAVSRKSKVIEKVVEKPVEKIVEVEKPVEKIV CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EVEKVVEVEKVIEKVVEVESKLATASTDSAMQLLSIMQQEARLIDFLQEDLTSFSDEEVG HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH AAARVIHSGGQKVLKEYVTLEAIRNEDEESRIVVEEGFNPQAIRLVGNVTGNAPFNGTLI HHHHHHHHCHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCEEEEEECCCCCCCCCCEEE HKGWKASAMTLPKLAENYDASIIAPAEVEL ECCCCCHHHHHHHHHCCCCCCEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA