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The map label for this gene is tonB2 [H]

Identifier: 37521384

GI number: 37521384

Start: 1935291

End: 1936076

Strand: Direct

Name: tonB2 [H]

Synonym: glr1815

Alternate gene names: 37521384

Gene position: 1935291-1936076 (Clockwise)

Preceding gene: 37521383

Following gene: 37521386

Centisome position: 41.54

GC content: 62.09

Gene sequence:

>786_bases
ATGGATTCCAATACAGAACCGTTTACGCCGTTTGAACCGACTTCCTCGGGAACTGCAAGTGGCTGGATTATTGCGCTGAG
TGTAATCGGATCGGCGGTGTTGCACGGGGGAGTGATGCTCTTGAACCTGCCGGAGCCCAAAGCTCCCGAGCCGCCGCCCG
TGCAGAAGATGGTGATGGTGCAGACCGCACCTCCTAAGCCGCCCGAGATTAAGCAGCCCGCTCCCCCCAAGCCGAAGCCC
AAGCCGCCCGAGCCGGTACAAACGAAGCCCAAGTCCAAGTCGGTGGCGAAGCGAAGCGCGCCGCAAAAAGCCAAAGCCTC
GCGCCCGATCCTGAGCAGCAAAGCTCCGGTTCAATCTGAGACCACCGTTTCGGAAAACATGCTGTCCGGTTCGCGCGGCA
CCGGCTACGGTACCGAAAAGGGCGAAGATTTCGGGAGTACTTCGCCGGTGGGTGTGGACGGTGGCACCGGCGGTACCGAG
GCGGTGGAAGCACCGCCGCCCCCACCGCCGCCGCCCCTGGTCAACGCCCGGCCGAAGGGCAACGTCCAGCCCGACTATCC
GGAAATTGCCCAGCAGAACAACTGGGAAGGGCGGGTGATTGTCAAAGCTTTTGTCAATCCCGACGGCACGGTAGCCGAGG
TGCAGGTGGCCAAATCCTCTGGCCATGTGGAACTGGACAACGCGGCGATGGAAGCGGTGAAACGCACTACCTTCGAACCT
GCCCGCCGCGGCGAAGAAGTGGTCTCCGCCTGGGTACGGGTACCGATCACTTTCTCGTTGCAGTAG

Upstream 100 bases:

>100_bases
AGGGTAGATATCTGAGAAAAGCTCTACATAGCAGTCTGGTGGAATAGGGTATACCCGGCTTCGCTCCGGGAAAGTCCGGC
TGTTTAGCAGTGAATTTGCT

Downstream 100 bases:

>100_bases
GCGGGTTTCACGCTACTGACTCGCTGTGCTCACCTTCAGGGTTCCGCCGCCAAGACGGAGTCGGAAGCATTCGCACGGCA
CTCGCACAGGGGCAGTTCGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 261; Mature: 261

Protein sequence:

>261_residues
MDSNTEPFTPFEPTSSGTASGWIIALSVIGSAVLHGGVMLLNLPEPKAPEPPPVQKMVMVQTAPPKPPEIKQPAPPKPKP
KPPEPVQTKPKSKSVAKRSAPQKAKASRPILSSKAPVQSETTVSENMLSGSRGTGYGTEKGEDFGSTSPVGVDGGTGGTE
AVEAPPPPPPPPLVNARPKGNVQPDYPEIAQQNNWEGRVIVKAFVNPDGTVAEVQVAKSSGHVELDNAAMEAVKRTTFEP
ARRGEEVVSAWVRVPITFSLQ

Sequences:

>Translated_261_residues
MDSNTEPFTPFEPTSSGTASGWIIALSVIGSAVLHGGVMLLNLPEPKAPEPPPVQKMVMVQTAPPKPPEIKQPAPPKPKP
KPPEPVQTKPKSKSVAKRSAPQKAKASRPILSSKAPVQSETTVSENMLSGSRGTGYGTEKGEDFGSTSPVGVDGGTGGTE
AVEAPPPPPPPPLVNARPKGNVQPDYPEIAQQNNWEGRVIVKAFVNPDGTVAEVQVAKSSGHVELDNAAMEAVKRTTFEP
ARRGEEVVSAWVRVPITFSLQ
>Mature_261_residues
MDSNTEPFTPFEPTSSGTASGWIIALSVIGSAVLHGGVMLLNLPEPKAPEPPPVQKMVMVQTAPPKPPEIKQPAPPKPKP
KPPEPVQTKPKSKSVAKRSAPQKAKASRPILSSKAPVQSETTVSENMLSGSRGTGYGTEKGEDFGSTSPVGVDGGTGGTE
AVEAPPPPPPPPLVNARPKGNVQPDYPEIAQQNNWEGRVIVKAFVNPDGTVAEVQVAKSSGHVELDNAAMEAVKRTTFEP
ARRGEEVVSAWVRVPITFSLQ

Specific function: Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requirin

COG id: COG0810

COG function: function code M; Periplasmic protein TonB, links inner and outer membranes

Gene ontology:

Cell location: Cell inner membrane; Single-pass membrane protein; Periplasmic side [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the tonB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003538
- InterPro:   IPR006260 [H]

Pfam domain/function: PF03544 TonB [H]

EC number: NA

Molecular weight: Translated: 27463; Mature: 27463

Theoretical pI: Translated: 9.43; Mature: 9.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDSNTEPFTPFEPTSSGTASGWIIALSVIGSAVLHGGVMLLNLPEPKAPEPPPVQKMVMV
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCEEEEE
QTAPPKPPEIKQPAPPKPKPKPPEPVQTKPKSKSVAKRSAPQKAKASRPILSSKAPVQSE
ECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCHHHHCCCCCCCCCCCCCC
TTVSENMLSGSRGTGYGTEKGEDFGSTSPVGVDGGTGGTEAVEAPPPPPPPPLVNARPKG
CHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
NVQPDYPEIAQQNNWEGRVIVKAFVNPDGTVAEVQVAKSSGHVELDNAAMEAVKRTTFEP
CCCCCCHHHHHCCCCCCEEEEEEEECCCCCEEEEEEECCCCCEEECHHHHHHHHHHCCCH
ARRGEEVVSAWVRVPITFSLQ
HHHHHHHHHHHHHCCEEEEEC
>Mature Secondary Structure
MDSNTEPFTPFEPTSSGTASGWIIALSVIGSAVLHGGVMLLNLPEPKAPEPPPVQKMVMV
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCEEEEE
QTAPPKPPEIKQPAPPKPKPKPPEPVQTKPKSKSVAKRSAPQKAKASRPILSSKAPVQSE
ECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCHHHHCCCCCCCCCCCCCC
TTVSENMLSGSRGTGYGTEKGEDFGSTSPVGVDGGTGGTEAVEAPPPPPPPPLVNARPKG
CHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
NVQPDYPEIAQQNNWEGRVIVKAFVNPDGTVAEVQVAKSSGHVELDNAAMEAVKRTTFEP
CCCCCCHHHHHCCCCCCEEEEEEEECCCCCEEEEEEECCCCCEEECHHHHHHHHHHCCCH
ARRGEEVVSAWVRVPITFSLQ
HHHHHHHHHHHHHCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 10689178; 10984043 [H]