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The map label for this gene is yccZ [C]

Identifier: 37521366

GI number: 37521366

Start: 1915910

End: 1916881

Strand: Reverse

Name: yccZ [C]

Synonym: gll1797

Alternate gene names: 37521366

Gene position: 1916881-1915910 (Counterclockwise)

Preceding gene: 37521367

Following gene: 37521365

Centisome position: 41.14

GC content: 66.67

Gene sequence:

>972_bases
ATGCAACGCGCTTGCCGGAACAAGCGTCGATTGGGTATCGGATGGCTCGCGCTCTGCGGCCTGGGATTTGCCGGACCACC
GGCCGAAGCCACAACCTTGAGCACCTTTGACCGGGTCTCGGTGGCGGTGGCCAACGGCGAAGAATTCGGTTCGGCCAAAG
ACGGTACCGATCCCGGGTTTCTCATCGGTGCGGACGGCTCCATCCATGTGCCGCAACTGGGCCGCATACCGGCGGCAGGA
CGGGAGGAGATCGAACTGCAGGAGGAACTGACCGCTCGCCTGCGGAACTTCATCCGGGTGCCGGATGTGTCGGTGCGCGT
AGTTTCGTTGAGCCCCGCCTCCGTCGAGGTCGCCGGTGCGGTCTACCGGCCTGGGCAACTGACGATCCGCTCCACCGCCG
GGAGCGAACCGGGTGCGACCCGGACTGTCTACAACGCCATTAAGGAGGCGGGCGGGGTGCGACCCGACGCCGATGTGACC
GCCATCGAACTGGAGCGCGCCGGCAAGCGCATCAAGCTGCCGCCGGGCCAGGACGCCCCGGTCATCGGCGGCGACCGCAT
CATCGTGGCAAGCCTTGGACCGAGACAGTCCGAGGCGAGCAACCTGCCCACCCAACTGGCTCCGGAGACCATTACCGTCT
ACGTTTCGGGCCAGGATTTGCCGGCGGGCTCGGCGGGACCAGTGAAGCTGCGGCCCGGCACCACCCTCGCTGGGGCGCTC
ACGGCCGCGGGCGGCTCGGGCGAATCGTTTTTGCGCTCGGGGCGCAAGGTGACGCTGATTCGCACCGATCCGGCCGGCGG
TCAGCGTACCGCCAAGAGCTTTGAGATGGCCGAGGTGCTGGGCGGCAGCAGCGATCCGAAGTTGATGCAGGACGACTCGG
TCGTGCTCGACGCCGGTTCGACGGCGAATACCAGCGGCGTCATGAGCCTGCTCTCGCCCTTGTTGATGCCTTTTGTGTGG
TTGTTCCGCTAG

Upstream 100 bases:

>100_bases
CCGCCGCCGCTCGGGCGGCGGGCTTGACCTATATCGGCGTCGGACGCCCCTGACTGAGGTCTCTAGGTCCGAATTGAGCA
AGAGTTCAAAGGAGGAAGCC

Downstream 100 bases:

>100_bases
TCGCCCACCGTACCTGAGGAAAACTTTGCCATGAGCAGTATCGTTGCAATCGGACGTCGGCACTGGCGGCCGTTGCTGGC
CCTCAACACCGTATTGTTGG

Product: polysaccharide export outer membrane protein

Products: NA

Alternate protein names: ORF4 [H]

Number of amino acids: Translated: 323; Mature: 323

Protein sequence:

>323_residues
MQRACRNKRRLGIGWLALCGLGFAGPPAEATTLSTFDRVSVAVANGEEFGSAKDGTDPGFLIGADGSIHVPQLGRIPAAG
REEIELQEELTARLRNFIRVPDVSVRVVSLSPASVEVAGAVYRPGQLTIRSTAGSEPGATRTVYNAIKEAGGVRPDADVT
AIELERAGKRIKLPPGQDAPVIGGDRIIVASLGPRQSEASNLPTQLAPETITVYVSGQDLPAGSAGPVKLRPGTTLAGAL
TAAGGSGESFLRSGRKVTLIRTDPAGGQRTAKSFEMAEVLGGSSDPKLMQDDSVVLDAGSTANTSGVMSLLSPLLMPFVW
LFR

Sequences:

>Translated_323_residues
MQRACRNKRRLGIGWLALCGLGFAGPPAEATTLSTFDRVSVAVANGEEFGSAKDGTDPGFLIGADGSIHVPQLGRIPAAG
REEIELQEELTARLRNFIRVPDVSVRVVSLSPASVEVAGAVYRPGQLTIRSTAGSEPGATRTVYNAIKEAGGVRPDADVT
AIELERAGKRIKLPPGQDAPVIGGDRIIVASLGPRQSEASNLPTQLAPETITVYVSGQDLPAGSAGPVKLRPGTTLAGAL
TAAGGSGESFLRSGRKVTLIRTDPAGGQRTAKSFEMAEVLGGSSDPKLMQDDSVVLDAGSTANTSGVMSLLSPLLMPFVW
LFR
>Mature_323_residues
MQRACRNKRRLGIGWLALCGLGFAGPPAEATTLSTFDRVSVAVANGEEFGSAKDGTDPGFLIGADGSIHVPQLGRIPAAG
REEIELQEELTARLRNFIRVPDVSVRVVSLSPASVEVAGAVYRPGQLTIRSTAGSEPGATRTVYNAIKEAGGVRPDADVT
AIELERAGKRIKLPPGQDAPVIGGDRIIVASLGPRQSEASNLPTQLAPETITVYVSGQDLPAGSAGPVKLRPGTTLAGAL
TAAGGSGESFLRSGRKVTLIRTDPAGGQRTAKSFEMAEVLGGSSDPKLMQDDSVVLDAGSTANTSGVMSLLSPLLMPFVW
LFR

Specific function: May be involved in polysaccharide transport [H]

COG id: COG1596

COG function: function code M; Periplasmic protein involved in polysaccharide export

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the BexD/CtrA/VexA family [H]

Homologues:

Organism=Escherichia coli, GI1787218, Length=282, Percent_Identity=25.886524822695, Blast_Score=68, Evalue=6e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003715
- InterPro:   IPR019554 [H]

Pfam domain/function: PF02563 Poly_export; PF10531 SLBB [H]

EC number: NA

Molecular weight: Translated: 33538; Mature: 33538

Theoretical pI: Translated: 8.20; Mature: 8.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQRACRNKRRLGIGWLALCGLGFAGPPAEATTLSTFDRVSVAVANGEEFGSAKDGTDPGF
CCCHHHHCCCCCHHHHHHHCCCCCCCCCCCCCHHHHCEEEEEEECCHHCCCCCCCCCCCE
LIGADGSIHVPQLGRIPAAGREEIELQEELTARLRNFIRVPDVSVRVVSLSPASVEVAGA
EEECCCCEECCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCEEEEEE
VYRPGQLTIRSTAGSEPGATRTVYNAIKEAGGVRPDADVTAIELERAGKRIKLPPGQDAP
EECCCEEEEEECCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEEEECCCCEEECCCCCCCC
VIGGDRIIVASLGPRQSEASNLPTQLAPETITVYVSGQDLPAGSAGPVKLRPGTTLAGAL
EECCCEEEEEECCCCCCHHHCCCCCCCCCEEEEEEECCCCCCCCCCCEEECCCCCEEHHE
TAAGGSGESFLRSGRKVTLIRTDPAGGQRTAKSFEMAEVLGGSSDPKLMQDDSVVLDAGS
EECCCCCHHHHHCCCEEEEEEECCCCCCHHHHHHHHHHHHCCCCCCCEECCCCEEEECCC
TANTSGVMSLLSPLLMPFVWLFR
CCCHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MQRACRNKRRLGIGWLALCGLGFAGPPAEATTLSTFDRVSVAVANGEEFGSAKDGTDPGF
CCCHHHHCCCCCHHHHHHHCCCCCCCCCCCCCHHHHCEEEEEEECCHHCCCCCCCCCCCE
LIGADGSIHVPQLGRIPAAGREEIELQEELTARLRNFIRVPDVSVRVVSLSPASVEVAGA
EEECCCCEECCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCEEEEEE
VYRPGQLTIRSTAGSEPGATRTVYNAIKEAGGVRPDADVTAIELERAGKRIKLPPGQDAP
EECCCEEEEEECCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEEEECCCCEEECCCCCCCC
VIGGDRIIVASLGPRQSEASNLPTQLAPETITVYVSGQDLPAGSAGPVKLRPGTTLAGAL
EECCCEEEEEECCCCCCHHHCCCCCCCCCEEEEEEECCCCCCCCCCCEEECCCCCEEHHE
TAAGGSGESFLRSGRKVTLIRTDPAGGQRTAKSFEMAEVLGGSSDPKLMQDDSVVLDAGS
EECCCCCHHHHHCCCEEEEEEECCCCCCHHHHHHHHHHHHCCCCCCCEECCCCEEEECCC
TANTSGVMSLLSPLLMPFVWLFR
CCCHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7896702 [H]