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The map label for this gene is cpcS2 [H]

Identifier: 37521183

GI number: 37521183

Start: 1729807

End: 1730445

Strand: Direct

Name: cpcS2 [H]

Synonym: glr1614

Alternate gene names: 37521183

Gene position: 1729807-1730445 (Clockwise)

Preceding gene: 37521179

Following gene: 37521191

Centisome position: 37.13

GC content: 66.35

Gene sequence:

>639_bases
ATGGCCAGAGATGTGATCGATTTTTTTCGCGCCAGCGCCGGACGCTGGTTCTCGCAGCGCAATCGCCTCGACCTGACCGG
CCGCCGCAGCGAGGGGAGTCGCTCCGAAGTCGAAATTGCCTGTCTGGAAGCCGACGATCCGCGCGCGATTGAATTGTGCC
GTCTCGGCGGCATCGATCCCGATCGCGCCGCCGGGGCACTGCTTATCGAGTGGAAGGGTGCACTCGATTTCGATAACAAG
ACCTACGCCGGCCGCTCGTTGCTGGTGAGCGCTCCCGACACGCCCGGCTCGGGCGAGGGGGATCTGGTGGCCCAGACCGC
CGCGGGCGGTGAGCCGCTGGTCGGACGCTTTCGGATGGGCGAGGATGACGCTCTGACTTTGTTGACCCGCCATGGCGCCG
TCGAAATCAAGGAGCGGTTACTGTTCGCCAGCCCGAACCTGCGCCTGCGCGCGGGCGTGGTCACCGGCCCGGACGGCCTG
AGCGTCACGACCTTCTGTTCGGAGGTGCGCAGGGCAGAAGCCCCCCCCGCCCAGCAACCGCCGCAGACCCAGGCGCGCAC
CTGGCCCAGCCAAACGAACGAACTGCCGGATTGGATCACCGAGGAGATGGCCAACAAGGGCGATAACCCGGAGGTTTAG

Upstream 100 bases:

>100_bases
TATAAATTATGCTTGAGTACAGCAGGGAAGAATCCTGGAGGCTAGATTCCATTTCCCCCGATATAATGAAAAACGGCGTC
AACGGGAAAGTCTTGAGCTG

Downstream 100 bases:

>100_bases
CGGGAAGTCTCCTCCGGGCTGCGGCTGCCTGTCGGGGGGATGCTGCCGTTGGTGGTGCCGTCGATGACGACGCGCACCTC
GCGTTGGGGAAAGGGAATCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 212; Mature: 211

Protein sequence:

>212_residues
MARDVIDFFRASAGRWFSQRNRLDLTGRRSEGSRSEVEIACLEADDPRAIELCRLGGIDPDRAAGALLIEWKGALDFDNK
TYAGRSLLVSAPDTPGSGEGDLVAQTAAGGEPLVGRFRMGEDDALTLLTRHGAVEIKERLLFASPNLRLRAGVVTGPDGL
SVTTFCSEVRRAEAPPAQQPPQTQARTWPSQTNELPDWITEEMANKGDNPEV

Sequences:

>Translated_212_residues
MARDVIDFFRASAGRWFSQRNRLDLTGRRSEGSRSEVEIACLEADDPRAIELCRLGGIDPDRAAGALLIEWKGALDFDNK
TYAGRSLLVSAPDTPGSGEGDLVAQTAAGGEPLVGRFRMGEDDALTLLTRHGAVEIKERLLFASPNLRLRAGVVTGPDGL
SVTTFCSEVRRAEAPPAQQPPQTQARTWPSQTNELPDWITEEMANKGDNPEV
>Mature_211_residues
ARDVIDFFRASAGRWFSQRNRLDLTGRRSEGSRSEVEIACLEADDPRAIELCRLGGIDPDRAAGALLIEWKGALDFDNKT
YAGRSLLVSAPDTPGSGEGDLVAQTAAGGEPLVGRFRMGEDDALTLLTRHGAVEIKERLLFASPNLRLRAGVVTGPDGLS
VTTFCSEVRRAEAPPAQQPPQTQARTWPSQTNELPDWITEEMANKGDNPEV

Specific function: Covalently attaches a chromophore to Cys residue(s) of phycobiliproteins [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CpcS/CpeS biliprotein lyase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012674
- InterPro:   IPR018536 [H]

Pfam domain/function: PF09367 CpeS [H]

EC number: NA

Molecular weight: Translated: 23032; Mature: 22901

Theoretical pI: Translated: 4.59; Mature: 4.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARDVIDFFRASAGRWFSQRNRLDLTGRRSEGSRSEVEIACLEADDPRAIELCRLGGIDP
CCHHHHHHHHHHHCHHHHCCCCEEECCCCCCCCCCEEEEEEEECCCCCEEEHEECCCCCC
DRAAGALLIEWKGALDFDNKTYAGRSLLVSAPDTPGSGEGDLVAQTAAGGEPLVGRFRMG
CCCCCEEEEEECCCCCCCCCCCCCCEEEEECCCCCCCCCCCEEEEECCCCCCCEEEEECC
EDDALTLLTRHGAVEIKERLLFASPNLRLRAGVVTGPDGLSVTTFCSEVRRAEAPPAQQP
CCCEEEEEECCCCHHHHHHEEEECCCCEEEEEEEECCCCCCHHHHHHHHHHCCCCCCCCC
PQTQARTWPSQTNELPDWITEEMANKGDNPEV
CCCHHHCCCCCCCCCHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
ARDVIDFFRASAGRWFSQRNRLDLTGRRSEGSRSEVEIACLEADDPRAIELCRLGGIDP
CHHHHHHHHHHHCHHHHCCCCEEECCCCCCCCCCEEEEEEEECCCCCEEEHEECCCCCC
DRAAGALLIEWKGALDFDNKTYAGRSLLVSAPDTPGSGEGDLVAQTAAGGEPLVGRFRMG
CCCCCEEEEEECCCCCCCCCCCCCCEEEEECCCCCCCCCCCEEEEECCCCCCCEEEEECC
EDDALTLLTRHGAVEIKERLLFASPNLRLRAGVVTGPDGLSVTTFCSEVRRAEAPPAQQP
CCCEEEEEECCCCHHHHHHEEEECCCCEEEEEEEECCCCCCHHHHHHHHHHCCCCCCCCC
PQTQARTWPSQTNELPDWITEEMANKGDNPEV
CCCHHHCCCCCCCCCHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA