Click here to switch to the map view.

The map label for this gene is trpD [H]

Identifier: 37521128

GI number: 37521128

Start: 1679871

End: 1680908

Strand: Direct

Name: trpD [H]

Synonym: glr1559

Alternate gene names: 37521128

Gene position: 1679871-1680908 (Clockwise)

Preceding gene: 37521127

Following gene: 37521129

Centisome position: 36.06

GC content: 65.61

Gene sequence:

>1038_bases
ATGAGCACGGCCTTTCGCGAATTCGTCAAAAAAATCGGCTCTGGTCGCCTCACCGGCCGCGACCTCACCCGTGAAGAATC
CTGCCGGGCGATGGCGATGCTGTTGCACCAGGAAGCCACCCCGACGCAGATCGGTGCTTTTTTGATCGCCCACCGCATCA
AGCGCCCGACCCCGGAAGAACTGGCGGGCATCCTCGACGCCTTTGATCAAGTGGCAAGACCGCTGACGGTCCCGGCGGAC
GCCCCACCGCCGCTGGTGCTGAGCAGCCCCTACGACGGCCAGGACCGCCTCGCCAACGTCACACCGCTTGCAGCCTTGAT
TGTCAGTGCCCTGGGCCAGGGGGTGGTGCTGCACGGCAGCACCGACATGCCCCCCAAGCACGGCCTCACCAGCTTCGACC
TGCTGGCAGGTCTGGGGGTGGACCTGAAGCGCGACCGGCAAATCCTCAGCGAGCAGTACCGGGCGACAGGTCTGGGCTGG
GTGTACCTGCCCGCCCATTTTCCTGAGGCATTTGCTTTGCAGGCTTTTCGCGACGAGATCGGCAAGCGTCCGCCGGTGGC
CACCGCTGAACTTTTCTGGAACCCGGTCGGCGTGGGTCTGCCGGTGATCGGCTACACCCACCGCGAGACGATCACCCTGG
CGGTCCAGACCGCGCCGCTTCGGGGTGCGACCGCGATGGTCATGGTGCGGGGTCTGCAGGGCTCGGTCAACTGCACGCTG
TTTCATCCCAATCTCGGGGTGCGCTGGACGGCGGCGATGGATACCCCCGAACCGTTTCGCATCCTGGCAAGCGACCACGG
CCTGGGGGACGACGATCTGTCTCTGGTGGGCGACGGCCAAGATCTCGAACGCCAGTCCGGTCTGTGCCTGGAGACCCTCC
AGGGCAAGGACACCCCCCTGCGTCGGGCGACGATCTTCAACAGCGCCTTTTTGCTGGTCCAATCCGGCCACAGCGCTTCG
CTCGAGACAGCAATTCCGCTTGCCGCCCGGGCGCTCGACGAAGGGCTCGCCTGGCGGCAACTCGAAAAGCTGCGCTAG

Upstream 100 bases:

>100_bases
TTACGCGCCTGGTGGCCGAGCACCTGCCCACCGCCTTCGCCCGCTGGGTCCACACCGGCCCCGAACCCTGGCTGCGCGAA
GCTTCGTACCTGGCGGGCTG

Downstream 100 bases:

>100_bases
CTTCCCAACCAGGCTTTAATAGGGACAGACGTCCTGGAAGTTGCCGATGACCACCGACCGGCCGCCGCGGCGCTCACTTC
CCACCATGTATGATCTTCCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 345; Mature: 344

Protein sequence:

>345_residues
MSTAFREFVKKIGSGRLTGRDLTREESCRAMAMLLHQEATPTQIGAFLIAHRIKRPTPEELAGILDAFDQVARPLTVPAD
APPPLVLSSPYDGQDRLANVTPLAALIVSALGQGVVLHGSTDMPPKHGLTSFDLLAGLGVDLKRDRQILSEQYRATGLGW
VYLPAHFPEAFALQAFRDEIGKRPPVATAELFWNPVGVGLPVIGYTHRETITLAVQTAPLRGATAMVMVRGLQGSVNCTL
FHPNLGVRWTAAMDTPEPFRILASDHGLGDDDLSLVGDGQDLERQSGLCLETLQGKDTPLRRATIFNSAFLLVQSGHSAS
LETAIPLAARALDEGLAWRQLEKLR

Sequences:

>Translated_345_residues
MSTAFREFVKKIGSGRLTGRDLTREESCRAMAMLLHQEATPTQIGAFLIAHRIKRPTPEELAGILDAFDQVARPLTVPAD
APPPLVLSSPYDGQDRLANVTPLAALIVSALGQGVVLHGSTDMPPKHGLTSFDLLAGLGVDLKRDRQILSEQYRATGLGW
VYLPAHFPEAFALQAFRDEIGKRPPVATAELFWNPVGVGLPVIGYTHRETITLAVQTAPLRGATAMVMVRGLQGSVNCTL
FHPNLGVRWTAAMDTPEPFRILASDHGLGDDDLSLVGDGQDLERQSGLCLETLQGKDTPLRRATIFNSAFLLVQSGHSAS
LETAIPLAARALDEGLAWRQLEKLR
>Mature_344_residues
STAFREFVKKIGSGRLTGRDLTREESCRAMAMLLHQEATPTQIGAFLIAHRIKRPTPEELAGILDAFDQVARPLTVPADA
PPPLVLSSPYDGQDRLANVTPLAALIVSALGQGVVLHGSTDMPPKHGLTSFDLLAGLGVDLKRDRQILSEQYRATGLGWV
YLPAHFPEAFALQAFRDEIGKRPPVATAELFWNPVGVGLPVIGYTHRETITLAVQTAPLRGATAMVMVRGLQGSVNCTLF
HPNLGVRWTAAMDTPEPFRILASDHGLGDDDLSLVGDGQDLERQSGLCLETLQGKDTPLRRATIFNSAFLLVQSGHSASL
ETAIPLAARALDEGLAWRQLEKLR

Specific function: Unknown

COG id: COG0547

COG function: function code E; Anthranilate phosphoribosyltransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the anthranilate phosphoribosyltransferase family [H]

Homologues:

Organism=Escherichia coli, GI1787019, Length=122, Percent_Identity=36.8852459016393, Blast_Score=77, Evalue=2e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005940
- InterPro:   IPR000312
- InterPro:   IPR017459
- InterPro:   IPR020072 [H]

Pfam domain/function: PF02885 Glycos_trans_3N; PF00591 Glycos_transf_3 [H]

EC number: =2.4.2.18 [H]

Molecular weight: Translated: 37345; Mature: 37214

Theoretical pI: Translated: 6.61; Mature: 6.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTAFREFVKKIGSGRLTGRDLTREESCRAMAMLLHQEATPTQIGAFLIAHRIKRPTPEE
CCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHH
LAGILDAFDQVARPLTVPADAPPPLVLSSPYDGQDRLANVTPLAALIVSALGQGVVLHGS
HHHHHHHHHHHHCCEECCCCCCCCEEEECCCCCHHHHCCHHHHHHHHHHHHCCCEEEECC
TDMPPKHGLTSFDLLAGLGVDLKRDRQILSEQYRATGLGWVYLPAHFPEAFALQAFRDEI
CCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHH
GKRPPVATAELFWNPVGVGLPVIGYTHRETITLAVQTAPLRGATAMVMVRGLQGSVNCTL
CCCCCCEEHHHHCCCCCCCCCEEEECCCCEEEEEEEECCCCCCEEEEEEECCCCCEEEEE
FHPNLGVRWTAAMDTPEPFRILASDHGLGDDDLSLVGDGQDLERQSGLCLETLQGKDTPL
ECCCCCEEEEEECCCCCCEEEEECCCCCCCCCCEEEECCCHHHHHCCCEEEHHCCCCCCC
RRATIFNSAFLLVQSGHSASLETAIPLAARALDEGLAWRQLEKLR
HHHHHHCCEEEEEECCCCCCCHHHHHHHHHHHHHCHHHHHHHHCC
>Mature Secondary Structure 
STAFREFVKKIGSGRLTGRDLTREESCRAMAMLLHQEATPTQIGAFLIAHRIKRPTPEE
CHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHH
LAGILDAFDQVARPLTVPADAPPPLVLSSPYDGQDRLANVTPLAALIVSALGQGVVLHGS
HHHHHHHHHHHHCCEECCCCCCCCEEEECCCCCHHHHCCHHHHHHHHHHHHCCCEEEECC
TDMPPKHGLTSFDLLAGLGVDLKRDRQILSEQYRATGLGWVYLPAHFPEAFALQAFRDEI
CCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHH
GKRPPVATAELFWNPVGVGLPVIGYTHRETITLAVQTAPLRGATAMVMVRGLQGSVNCTL
CCCCCCEEHHHHCCCCCCCCCEEEECCCCEEEEEEEECCCCCCEEEEEEECCCCCEEEEE
FHPNLGVRWTAAMDTPEPFRILASDHGLGDDDLSLVGDGQDLERQSGLCLETLQGKDTPL
ECCCCCEEEEEECCCCCCEEEEECCCCCCCCCCEEEECCCHHHHHCCCEEEHHCCCCCCC
RRATIFNSAFLLVQSGHSASLETAIPLAARALDEGLAWRQLEKLR
HHHHHHCCEEEEEECCCCCCCHHHHHHHHHHHHHCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA